Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B03911 Eucalyptus grandis HOM05D003791 ORTHO05D004961 0.0e+00 1853.2 964 100.0
CiPaw.13G143800 Carya illinoinensis HOM05D003791 ORTHO05D004961 0.0e+00 1634.0 963 84.7
PGR102G1149 Punica granatum HOM05D003791 ORTHO05D004961 0.0e+00 1605.1 966 85.7
Haze_23510 Corylus avellana HOM05D003791 ORTHO05D004961 0.0e+00 1603.2 986 83.5
Atru.chr3.3491 Acer truncatum HOM05D003791 ORTHO05D004961 0.0e+00 1593.6 962 83.6
Thecc.09G295700 Theobroma cacao HOM05D003791 ORTHO05D004961 0.0e+00 1592.0 962 85.0
Ciclev10027764m.g Citrus clementina HOM05D003791 ORTHO05D004961 0.0e+00 1590.1 962 83.3
Cfa010128 Carpinus fangiana HOM05D003791 ORTHO05D004961 0.0e+00 1583.5 913 84.7
RcHm_v2.0_Chr5g0056311 Rosa chinensis HOM05D003791 ORTHO05D004961 0.0e+00 1580.8 960 83.4
Actinidia07195 Actinidia chinensis HOM05D003791 ORTHO05D004961 0.0e+00 1579.7 959 84.7
Glyma.11G191000 Glycine max HOM05D003791 ORTHO05D004961 0.0e+00 1579.7 962 83.2
COL.COLO4_19230 Corchorus olitorius HOM05D003791 ORTHO05D004961 0.0e+00 1579.3 913 85.4
Manes.11G154100 Manihot esculenta HOM05D003791 ORTHO05D004961 0.0e+00 1577.8 962 83.8
Prupe.6G114800 Prunus persica HOM05D003791 ORTHO05D004961 0.0e+00 1576.2 965 83.5
Rhsim13G0102400 Rhododendron simsii HOM05D003791 ORTHO05D004961 0.0e+00 1573.1 913 84.8
MD11G1151700 Malus domestica HOM05D003791 ORTHO05D004961 0.0e+00 1570.4 961 83.2
CSS0014729 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 0.0e+00 1569.3 964 83.0
Hma1.2p1_0051F.1_g029640 Hydrangea macrophylla HOM05D003791 ORTHO05D004961 0.0e+00 1568.1 962 82.7
Potri.001G212700 Populus trichocarpa HOM05D003791 ORTHO05D004961 0.0e+00 1567.7 963 83.5
FvH4_3g30370 Fragaria vesca HOM05D003791 ORTHO05D004961 0.0e+00 1567.0 960 82.5
Phvul.011G088100 Phaseolus vulgaris HOM05D003791 ORTHO05D004961 0.0e+00 1566.2 962 81.7
GSVIVG01031443001 Vitis vinifera HOM05D003791 ORTHO05D004961 0.0e+00 1566.2 913 83.0
FAN21G3702 Fragaria x ananassa HOM05D003791 ORTHO05D004961 0.0e+00 1565.8 962 82.4
Lj3g0020816 Lotus japonicus HOM05D003791 ORTHO05D004961 0.0e+00 1565.8 962 80.1
CiPaw.14G105700 Carya illinoinensis HOM05D003791 ORTHO05D004961 0.0e+00 1565.4 964 81.5
CANSAT64G0962 Cannabis sativa HOM05D003791 ORTHO05D004961 0.0e+00 1565.1 966 82.9
Duzib168G1694 Durio zibethinus HOM05D003791 ORTHO05D004961 0.0e+00 1565.1 962 82.6
Glyma.12G083300 Glycine max HOM05D003791 ORTHO05D004961 0.0e+00 1564.7 959 82.1
Sabra04G0148600 Salix brachista HOM05D003791 ORTHO05D004961 0.0e+00 1563.5 972 82.4
VMungo1127G0886 Vigna mungo HOM05D003791 ORTHO05D004961 0.0e+00 1563.5 962 81.7
Lj3g0026116 Lotus japonicus HOM05D003791 ORTHO05D004961 0.0e+00 1563.1 962 81.7
FAN11G2854 Fragaria x ananassa HOM05D003791 ORTHO05D004961 0.0e+00 1562.7 960 82.3
TAR623G0647 Trochodendron aralioides HOM05D003791 ORTHO05D004961 0.0e+00 1562.0 962 83.0
FAN16G1431 Fragaria x ananassa HOM05D003791 ORTHO05D004961 0.0e+00 1558.5 960 81.8
TPR.G35046 Trifolium pratense HOM05D003791 ORTHO05D004961 0.0e+00 1557.0 962 80.9
Gohir.D08G013600 Gossypium hirsutum HOM05D003791 ORTHO05D004961 0.0e+00 1555.8 963 82.7
Actinidia24158 Actinidia chinensis HOM05D003791 ORTHO05D004961 0.0e+00 1555.0 962 82.7
Gorai.004G007900 Gossypium raimondii HOM05D003791 ORTHO05D004961 0.0e+00 1553.1 962 82.2
TWI79G0622 Tripterygium wilfordii HOM05D003791 ORTHO05D004961 0.0e+00 1551.6 963 82.1
CsaV3_1G014360 Cucumis sativus L. HOM05D003791 ORTHO05D004961 0.0e+00 1551.2 963 81.5
Ca_19327_v3 Cicer arietinum L. HOM05D003791 ORTHO05D004961 0.0e+00 1550.8 963 80.8
Gohir.A09G087400 Gossypium hirsutum HOM05D003791 ORTHO05D004961 0.0e+00 1549.6 963 82.9
Gohir.D09G087100 Gossypium hirsutum HOM05D003791 ORTHO05D004961 0.0e+00 1548.5 962 82.7
Lalb_Chr22g0350471 Lupinus albus HOM05D003791 ORTHO05D004961 0.0e+00 1548.5 962 82.5
MELO3C004827.2 Cucumis melo HOM05D003791 ORTHO05D004961 0.0e+00 1546.6 963 81.2
Manes.04G011800 Manihot esculenta HOM05D003791 ORTHO05D004961 0.0e+00 1545.8 962 81.1
CAN.G1432.22 Capsicum annuum HOM05D003791 ORTHO05D004961 0.0e+00 1544.6 964 80.5
Medtr4g056480 Medicago truncatula HOM05D003791 ORTHO05D004961 0.0e+00 1544.3 963 80.8
Psat7g191520 Pisum sativum HOM05D003791 ORTHO05D004961 0.0e+00 1544.3 960 80.5
Gohir.A08G003200 Gossypium hirsutum HOM05D003791 ORTHO05D004961 0.0e+00 1542.7 962 81.8
Potri.009G002400 Populus trichocarpa HOM05D003791 ORTHO05D004961 0.0e+00 1539.6 963 81.4
arahy.Tifrunner.gnm1.ann1.53PLGZ Arachis hypogaea HOM05D003791 ORTHO05D004961 0.0e+00 1535.4 967 82.1
arahy.Tifrunner.gnm1.ann1.DSMN0K Arachis hypogaea HOM05D003791 ORTHO05D004961 0.0e+00 1535.0 967 81.8
MD03G1129800 Malus domestica HOM05D003791 ORTHO05D004961 0.0e+00 1530.4 961 80.6
Peaxi162Scf00150g00213 Petunia axillaris HOM05D003791 ORTHO05D004961 0.0e+00 1530.4 959 81.0
Nitab4.5_0004517g0020 Nicotiana tabacum HOM05D003791 ORTHO05D004961 0.0e+00 1528.8 979 79.3
Solyc06g074740.3 Solanum lycopersicum HOM05D003791 ORTHO05D004961 0.0e+00 1528.5 968 79.6
Sopen11g026300 Solanum pennellii HOM05D003791 ORTHO05D004961 0.0e+00 1525.0 959 79.7
Migut.N02533 Erythranthe guttata HOM05D003791 ORTHO05D004961 0.0e+00 1523.1 962 80.6
Sed0022437 Sechium edule HOM05D003791 ORTHO05D004961 0.0e+00 1523.1 963 80.7
Cc01_g10100 Coffea canephora HOM05D003791 ORTHO05D004961 0.0e+00 1519.2 962 79.5
Sopen06g031150 Solanum pennellii HOM05D003791 ORTHO05D004961 0.0e+00 1517.3 966 79.0
Solyc11g066560.3 Solanum lycopersicum HOM05D003791 ORTHO05D004961 0.0e+00 1516.9 959 79.0
Aqoxy1G01033 Aquilegia oxysepala HOM05D003791 ORTHO05D004961 0.0e+00 1516.1 963 79.3
THA.LOC104800566 Tarenaya hassleriana HOM05D003791 ORTHO05D004961 0.0e+00 1506.9 966 81.0
CSS0049530 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 0.0e+00 1506.5 966 80.5
TAR369G0287 Trochodendron aralioides HOM05D003791 ORTHO05D004961 0.0e+00 1505.3 922 80.0
Duzib170G1073 Durio zibethinus HOM05D003791 ORTHO05D004961 0.0e+00 1503.8 967 80.2
Gorai.006G103500 Gossypium raimondii HOM05D003791 ORTHO05D004961 0.0e+00 1496.9 963 80.8
vmacro03244 Vaccinium macrocarpon HOM05D003791 ORTHO05D004961 0.0e+00 1495.7 1188 67.8
CAN.G546.67 Capsicum annuum HOM05D003791 ORTHO05D004961 0.0e+00 1494.6 915 79.7
Nitab4.5_0000173g0320 Nicotiana tabacum HOM05D003791 ORTHO05D004961 0.0e+00 1491.9 923 80.2
arahy.Tifrunner.gnm1.ann1.BYIB55 Arachis hypogaea HOM05D003791 ORTHO05D004961 0.0e+00 1490.3 969 80.2
ECA233G0170 Erigeron canadensis HOM05D003791 ORTHO05D004961 0.0e+00 1489.9 962 78.6
HanXRQChr13g0403561 Helianthus annuus HOM05D003791 ORTHO05D004961 0.0e+00 1488.4 960 78.5
DCAR_018754 Daucus carota HOM05D003791 ORTHO05D004961 0.0e+00 1487.6 985 76.0
SalBow3G1938 Salvia bowleyana HOM05D003791 ORTHO05D004961 0.0e+00 1483.4 969 78.3
C05p06320 Brassica napus HOM05D003791 ORTHO05D004961 0.0e+00 1477.6 982 78.5
A06p05250 Brassica napus HOM05D003791 ORTHO05D004961 0.0e+00 1477.2 982 78.6
BraA06t23732Z Brassica rapa HOM05D003791 ORTHO05D004961 0.0e+00 1477.2 982 78.6
BolC5t29388H Brassica oleracea HOM05D003791 ORTHO05D004961 0.0e+00 1474.9 969 79.3
DCAR_006140 Daucus carota HOM05D003791 ORTHO05D004961 0.0e+00 1474.1 921 77.3
Thhalv10006697m.g Eutrema salsugineum HOM05D003791 ORTHO05D004961 0.0e+00 1473.0 971 78.6
Carub.0001s0755 Capsella rubella HOM05D003791 ORTHO05D004961 0.0e+00 1468.0 970 78.4
Sabra09G0001100 Salix brachista HOM05D003791 ORTHO05D004961 0.0e+00 1467.6 993 75.2
Nn2g13909 Nelumbo nucifera HOM05D003791 ORTHO05D004961 0.0e+00 1462.2 962 77.4
Sp1g06840 Schrenkiella parvula HOM05D003791 ORTHO05D004961 0.0e+00 1460.7 969 78.7
PSO339G5439 Papaver somniferum HOM05D003791 ORTHO05D004961 0.0e+00 1458.4 967 78.3
CARHR008020 Cardamine hirsuta HOM05D003791 ORTHO05D004961 0.0e+00 1454.9 966 76.8
PSO063G7392 Papaver somniferum HOM05D003791 ORTHO05D004961 0.0e+00 1451.8 967 76.5
AL1G18600 Arabidopsis lyrata HOM05D003791 ORTHO05D004961 0.0e+00 1451.0 977 78.1
Oeu035522.1 Olea europaea HOM05D003791 ORTHO05D004961 0.0e+00 1449.1 921 78.9
AT1G08190 Arabidopsis thaliana HOM05D003791 ORTHO05D004961 0.0e+00 1445.6 978 77.6
Nitab4.5_0003470g0120 Nicotiana tabacum HOM05D003791 ORTHO05D004961 0.0e+00 1440.6 912 79.7
Aa31LG11G12710 Aethionema arabicum HOM05D003791 ORTHO05D004961 0.0e+00 1440.2 963 76.6
Lsat_1_v5_gn_6_42140 Lactuca sativa HOM05D003791 ORTHO05D004961 0.0e+00 1433.3 961 77.0
Lalb_Chr03g0027821 Lupinus albus HOM05D003791 ORTHO05D004961 0.0e+00 1426.8 963 75.2
Dinv29393 Davidia involucrata HOM05D003791 ORTHO05D004961 0.0e+00 1420.2 829 82.5
Hund00856 Selenicereus undatus HOM05D003791 ORTHO05D004961 0.0e+00 1418.7 962 73.5
SGA_v2.0_scaffold83G26445 Striga asiatica HOM05D003791 ORTHO05D004961 0.0e+00 1410.2 823 82.6
arahy.Tifrunner.gnm1.ann1.EI6HBJ Arachis hypogaea HOM05D003791 ORTHO05D004961 0.0e+00 1407.9 969 76.9
EL10Ac9g20994 Beta vulgaris HOM05D003791 ORTHO05D004961 0.0e+00 1394.8 962 72.5
unitig_22.g5654 Utricularia gibba HOM05D003791 ORTHO05D004961 0.0e+00 1394.8 968 71.7
ATR0580G402 Amborella trichopoda HOM05D003791 ORTHO05D004961 0.0e+00 1376.3 924 73.3
CDE09G0630 Ceratophyllum demersum HOM05D003791 ORTHO05D004961 0.0e+00 1375.1 960 70.1
Peaxi162Scf00114g00310 Petunia axillaris HOM05D003791 ORTHO05D004961 0.0e+00 1343.2 919 72.4
SHI06192 Sapria himalayana HOM05D003791 ORTHO05D004961 0.0e+00 1337.8 908 72.9
AUR62024040 Chenopodium quinoa HOM05D003791 ORTHO05D004961 0.0e+00 1334.3 913 70.9
Sc21g0003980 Simmondsia chinensis HOM05D003791 ORTHO05D004961 0.0e+00 1327.0 789 84.0
Os04g0195000 Oryza sativa ssp. japonica HOM05D003791 ORTHO05D004961 0.0e+00 1324.3 962 69.5
Lj1A216G25 Lonicera japonica HOM05D003791 ORTHO05D004961 0.0e+00 1294.6 786 81.0
CSS0001832 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 0.0e+00 1253.8 726 84.2
SEGI_35272 Sequoiadendron giganteum HOM05D003791 ORTHO05D004961 0.0e+00 1237.2 921 65.4
AUR62040426 Chenopodium quinoa HOM05D003791 ORTHO05D004961 0.0e+00 1202.2 788 72.8
DCAR_015496 Daucus carota HOM05D003791 ORTHO05D004961 0.0e+00 1177.2 946 63.4
Dinv12566 Davidia involucrata HOM05D003791 ORTHO05D004961 0.0e+00 1145.6 687 82.1
Mapoly0052s0125 Marchantia polymorpha HOM05D003791 ORTHO05D004961 0.0e+00 1139.4 951 60.0
AagrBONN_evm.TU.Sc2ySwM_368.1978 Anthoceros agrestis HOM05D003791 ORTHO05D004961 0.0e+00 1129.0 984 57.8
Ah.01g004870 Amaranthus hybridus HOM05D003791 ORTHO05D004961 0.0e+00 1124.8 964 62.2
Pp3c15_14510 Physcomitrium patens HOM05D003791 ORTHO05D004961 0.0e+00 1106.3 971 58.5
ClCG09G017560 Citrullus lanatus HOM05D003791 ORTHO05D004961 0.0e+00 1103.6 727 78.8
HPP92_012850 Vanilla planifolia HOM05D003791 ORTHO05D004961 5.7e-298 1027.7 664 77.9
SMO118G0273 Selaginella moellendorffii HOM05D003791 ORTHO05D004961 3.4e-290 1001.9 789 61.1
arahy.Tifrunner.gnm1.ann1.SF2S3L Arachis hypogaea HOM05D003791 ORTHO05D004961 2.2e-281 972.6 673 75.9
HPP92_012843 Vanilla planifolia HOM05D003791 ORTHO05D004961 8.0e-276 954.1 594 80.3
Nn6g35161 Nelumbo nucifera HOM05D003791 ORTHO05D004961 5.1e-254 881.7 561 78.8
QL01p014586 Quercus lobata HOM05D003791 ORTHO05D004961 1.7e-241 840.1 524 79.2
QL03p064651 Quercus lobata HOM05D003791 ORTHO05D004961 2.4e-235 819.7 599 70.6
QL03p064641 Quercus lobata HOM05D003791 ORTHO05D004961 6.5e-217 758.4 441 87.5
FAN21G1169 Fragaria x ananassa HOM05D003791 ORTHO05D004961 2.1e-215 753.4 500 75.6
Nn6g35165 Nelumbo nucifera HOM05D003791 ORTHO05D004961 1.2e-186 657.9 403 84.1
Nn6g32817 Nelumbo nucifera HOM05D003791 ORTHO05D004961 1.5e-184 651.0 386 81.6
PRCOL_00006500 Prasinoderma coloniale HOM05D003791 ORTHO05D004961 1.3e-177 627.9 979 39.1
Mapoly0052s0123 Marchantia polymorpha HOM05D003791 ORTHO05D004961 4.0e-150 536.6 415 64.1
Zm00001eb066510 Zea mays HOM05D003791 ORTHO05D004961 3.9e-145 520.0 417 62.4
MCO08G243 Micromonas commoda HOM05D003791 ORTHO05D004961 7.3e-144 515.8 822 38.1
Cpa.g.sc47.25 Carica papaya HOM05D003791 ORTHO05D004961 1.4e-123 448.4 480 53.8
TWI75G0171 Tripterygium wilfordii HOM05D003791 ORTHO05D004961 4.0e-118 430.3 252 81.3
Cpa.g.sc47.26 Carica papaya HOM05D003791 ORTHO05D004961 7.6e-117 426.0 223 91.0
Cre03.g209281 Chlamydomonas reinhardtii HOM05D003791 ORTHO05D004961 2.9e-108 397.5 1052 27.6
SMO266G0036 Selaginella moellendorffii HOM05D003791 ORTHO05D004961 4.2e-107 393.7 851 33.0
Zm00001eb043500 Zea mays HOM05D003791 ORTHO05D004961 2.8e-103 380.9 289 66.4
ClCG00G003900 Citrullus lanatus HOM05D003791 ORTHO05D004961 6.3e-95 353.2 249 70.7
Zm00001eb057600 Zea mays HOM05D003791 ORTHO05D004961 2.5e-91 341.3 253 66.0
Zm00001eb364150 Zea mays HOM05D003791 ORTHO05D004961 2.5e-91 341.3 253 66.0
CBR_g63066 Chara braunii HOM05D003791 ORTHO05D000002 5.5e-91 340.1 365 46.3
arahy.Tifrunner.gnm1.ann1.5PQ0NB Arachis hypogaea HOM05D003791 ORTHO05D004961 1.5e-85 322.0 296 59.8
DCAR_031428 Daucus carota HOM05D003791 ORTHO05D004961 5.9e-61 240.4 148 76.4
SMO297G0006 Selaginella moellendorffii HOM05D003791 ORTHO05D004961 5.0e-52 210.7 174 53.4
Zm00001eb157910 Zea mays HOM05D003791 ORTHO05D004961 1.3e-47 196.1 149 62.4
Zm00001eb222800 Zea mays HOM05D003791 ORTHO05D004961 1.3e-47 196.1 149 62.4
FAN21G2323 Fragaria x ananassa HOM05D003791 ORTHO05D004961 1.6e-45 189.1 241 49.4
Nn2g15996 Nelumbo nucifera HOM05D003791 ORTHO05D004961 1.7e-44 185.7 118 74.6
Zm00001eb291510 Zea mays HOM05D003791 ORTHO05D004961 1.7e-44 185.7 139 62.6
GSVIVG01024429001 Vitis vinifera HOM05D003791 ORTHO05D013423 4.3e-43 181.0 102 83.3
CBR_g75953 Chara braunii HOM05D003791 ORTHO05D004961 3.1e-41 174.9 141 55.3
Ah.09g226470 Amaranthus hybridus HOM05D003791 ORTHO05D019539 9.8e-40 169.9 161 54.0
Zm00001eb291520 Zea mays HOM05D003791 ORTHO05D004961 1.7e-39 169.1 99 80.8
Oeu000610.1 Olea europaea HOM05D003791 ORTHO05D004961 1.7e-36 159.1 120 70.8
CSS0038043 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 7.3e-35 153.7 76 92.1
AUR62024999 Chenopodium quinoa HOM05D003791 ORTHO05D019539 1.2e-34 152.9 111 69.4
CSS0018078 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 2.1e-34 152.1 76 90.8
CSS0039906 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 2.8e-34 151.8 75 93.3
CSS0036642 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 1.4e-33 149.4 76 89.5
CSS0027626 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 1.5e-32 146.0 80 87.5
CSS0017290 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 2.0e-32 145.6 78 85.9
DCAR_024781 Daucus carota HOM05D003791 ORTHO05D004961 1.3e-31 142.9 88 79.5
AUR62024027 Chenopodium quinoa HOM05D003791 ORTHO05D000022 4.9e-31 141.0 93 77.4
Cfa022812 Carpinus fangiana HOM05D003791 ORTHO05D123815 1.1e-27 129.8 588 23.0
GSVIVG01004781001 Vitis vinifera HOM05D003791 ORTHO05D013423 2.5e-27 128.6 78 78.2
Ah.10g024760 Amaranthus hybridus HOM05D001024 ORTHO05D000878 4.3e-27 127.9 131 51.1
Nn2g15995 Nelumbo nucifera HOM05D003791 ORTHO05D004961 5.6e-27 127.5 65 90.8
Ah.13g066400 Amaranthus hybridus HOM05D003791 ORTHO05D019539 5.8e-24 117.5 111 53.2
TWI75G0356 Tripterygium wilfordii HOM05D003791 ORTHO05D004961 3.2e-22 111.7 143 49.0
AUR62040427 Chenopodium quinoa HOM05D003791 ORTHO05D019539 5.1e-20 104.4 129 44.2
Lj1C215T10 Lonicera japonica HOM05D003791 ORTHO05D019539 2.5e-19 102.1 121 42.1
RcHm_v2.0_Chr5g0056291 Rosa chinensis HOM05D003791 ORTHO05D004961 3.2e-14 85.1 80 56.2
GSVIVG01014936001 Vitis vinifera HOM05D003919 ORTHO05D004906 1.5e-11 76.3 56 64.3
PSO339G1674 Papaver somniferum HOM05D003791 ORTHO05D004961 6.2e-10 70.9 46 63.0
CSS0019611 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D019539 2.0e-08 65.9 131 42.7
AagrBONN_evm.TU.Sc2ySwM_368.1888 Anthoceros agrestis HOM05D004575 ORTHO05D004251 4.5e-08 64.7 42 66.7
Pp3c9_21930 Physcomitrium patens HOM05D003791 ORTHO05D308914 3.8e-07 61.6 48 56.2


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