Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA246G3778 Erigeron canadensis HOM05D006139 ORTHO05D007681 0.0e+00 1233.8 627 100.0
Lsat_1_v5_gn_3_24941 Lactuca sativa HOM05D006139 ORTHO05D007681 1.9e-310 1068.5 631 85.7
Hma1.2p1_0412F.1_g147150 Hydrangea macrophylla HOM05D006139 ORTHO05D007681 4.3e-278 961.1 630 76.2
CSS0045945 Camellia sinensis var. sinensis HOM05D006139 ORTHO05D007681 3.1e-276 954.9 630 75.1
Potri.011G107400 Populus trichocarpa HOM05D006139 ORTHO05D007681 9.2e-273 943.3 630 74.4
Sopen09g036170 Solanum pennellii HOM05D006139 ORTHO05D007681 7.3e-270 933.7 627 74.0
Solyc09g098230.3 Solanum lycopersicum HOM05D006139 ORTHO05D007681 2.4e-268 928.7 627 73.7
QL10p044141 Quercus lobata HOM05D006139 ORTHO05D007681 1.7e-266 922.5 663 69.5
Prupe.1G178000 Prunus persica HOM05D006139 ORTHO05D007681 2.2e-266 922.2 630 72.9
Ciclev10019318m.g Citrus clementina HOM05D006139 ORTHO05D007681 4.9e-266 921.0 630 72.4
GSVIVG01031668001 Vitis vinifera HOM05D006139 ORTHO05D007681 6.4e-266 920.6 630 73.5
Sabra11G0095200 Salix brachista HOM05D006139 ORTHO05D007681 1.4e-265 919.5 638 72.9
CANSAT11G1108 Cannabis sativa HOM05D006139 ORTHO05D007681 1.9e-265 919.1 630 72.7
Cc03_g10570 Coffea canephora HOM05D006139 ORTHO05D007681 1.9e-265 919.1 630 72.5
TWI38G2388 Tripterygium wilfordii HOM05D006139 ORTHO05D007681 5.4e-265 917.5 630 72.9
Eucgr.F03241 Eucalyptus grandis HOM05D006139 ORTHO05D007681 7.8e-264 913.7 630 72.4
SGA_v2.0_scaffold109G31142 Striga asiatica HOM05D006139 ORTHO05D007681 7.8e-264 913.7 632 71.7
Aqoxy2G03950 Aquilegia oxysepala HOM05D006139 ORTHO05D007681 8.7e-263 910.2 631 71.6
RcHm_v2.0_Chr4g0409801 Rosa chinensis HOM05D006139 ORTHO05D007681 1.9e-262 909.1 630 72.5
Migut.N00440 Erythranthe guttata HOM05D006139 ORTHO05D007681 4.3e-262 907.9 630 71.9
Sed0017452 Sechium edule HOM05D006139 ORTHO05D007681 2.1e-261 905.6 630 71.7
Manes.03G099000 Manihot esculenta HOM05D006139 ORTHO05D007681 8.1e-261 903.7 630 70.6
Thecc.07G123700 Theobroma cacao HOM05D006139 ORTHO05D007681 2.4e-260 902.1 630 70.3
Rhsim07G0086500 Rhododendron simsii HOM05D006139 ORTHO05D007681 5.3e-260 901.0 721 65.0
TAR365G1167 Trochodendron aralioides HOM05D006139 ORTHO05D007681 5.3e-260 901.0 605 74.2
MD13G1278700 Malus domestica HOM05D006139 ORTHO05D007681 4.4e-259 897.9 630 71.4
Duzib213G0841 Durio zibethinus HOM05D006139 ORTHO05D007681 4.9e-258 894.4 627 69.7
MELO3C017678.2 Cucumis melo HOM05D006139 ORTHO05D007681 2.4e-257 892.1 630 70.5
MSTRG.17865 Avicennia marina HOM05D006139 ORTHO05D007681 4.2e-257 891.3 629 70.9
Sc22g0003230 Simmondsia chinensis HOM05D006139 ORTHO05D007681 1.2e-256 889.8 629 70.7
CsaV3_4G003770 Cucumis sativus L. HOM05D006139 ORTHO05D007681 8.7e-255 883.6 630 70.0
CiPaw.01G108300 Carya illinoinensis HOM05D006139 ORTHO05D007681 1.9e-254 882.5 630 71.3
Gohir.A01G052100 Gossypium hirsutum HOM05D006139 ORTHO05D007681 1.3e-253 879.8 627 69.7
FvH4_4g12150 Fragaria vesca HOM05D006139 ORTHO05D007681 1.1e-252 876.7 630 70.0
FAN12G2778 Fragaria x ananassa HOM05D006139 ORTHO05D007681 1.1e-252 876.7 630 70.2
PSO675G6876 Papaver somniferum HOM05D006139 ORTHO05D007681 1.4e-252 876.3 629 70.0
PSO017G2886 Papaver somniferum HOM05D006139 ORTHO05D007681 4.0e-252 874.8 629 69.6
arahy.Tifrunner.gnm1.ann1.46LBLY Arachis hypogaea HOM05D006139 ORTHO05D007681 2.0e-251 872.5 628 69.3
Gorai.002G052100 Gossypium raimondii HOM05D006139 ORTHO05D007681 2.0e-251 872.5 627 69.2
Glyma.20G248800 Glycine max HOM05D006139 ORTHO05D007681 3.4e-251 871.7 636 69.0
Lalb_Chr06g0164661 Lupinus albus HOM05D006139 ORTHO05D007681 4.5e-251 871.3 631 68.5
Nn3g20967 Nelumbo nucifera HOM05D006139 ORTHO05D007681 3.5e-248 861.7 610 70.2
Lj5g0023092 Lotus japonicus HOM05D006139 ORTHO05D007681 3.4e-243 845.1 628 67.5
AT1G16970 Arabidopsis thaliana HOM05D006139 ORTHO05D007681 3.8e-242 841.6 627 65.6
VMungo0720G1636 Vigna mungo HOM05D006139 ORTHO05D007681 2.5e-241 839.0 631 66.6
Carub.0001s1670 Capsella rubella HOM05D006139 ORTHO05D007681 5.5e-241 837.8 625 64.8
Psat6g243280 Pisum sativum HOM05D006139 ORTHO05D007681 5.5e-241 837.8 631 66.1
Sp1g15110 Schrenkiella parvula HOM05D006139 ORTHO05D007681 4.6e-240 834.7 627 65.6
PGR031G2404 Punica granatum HOM05D006139 ORTHO05D007681 1.3e-239 833.2 630 65.2
Thhalv10007085m.g Eutrema salsugineum HOM05D006139 ORTHO05D007681 2.1e-237 825.9 627 65.1
C05p15280 Brassica napus HOM05D006139 ORTHO05D007681 1.8e-236 822.8 627 64.9
Gohir.D01G041500 Gossypium hirsutum HOM05D006139 ORTHO05D007681 1.8e-236 822.8 588 69.4
BcaC05g25552 Brassica carinata HOM05D006139 ORTHO05D007681 6.9e-236 820.8 627 64.6
Medtr1g116980 Medicago truncatula HOM05D006139 ORTHO05D007681 1.0e-234 817.0 628 65.1
THA.LOC104812308 Tarenaya hassleriana HOM05D006139 ORTHO05D007681 2.2e-234 815.8 626 64.4
Zm00001eb116810 Zea mays HOM05D006139 ORTHO05D007681 3.8e-234 815.1 632 62.8
BcaB02g06659 Brassica carinata HOM05D006139 ORTHO05D007681 6.5e-234 814.3 627 64.4
A06p12870 Brassica napus HOM05D006139 ORTHO05D007681 2.5e-233 812.4 627 64.1
CARHR017480 Cardamine hirsuta HOM05D006139 ORTHO05D007681 3.2e-233 812.0 628 64.5
Hund19684 Selenicereus undatus HOM05D006139 ORTHO05D007681 3.5e-232 808.5 631 66.6
Dinv44237 Davidia involucrata HOM05D006139 ORTHO05D007681 1.8e-231 806.2 495 79.8
Phvul.007G001600 Phaseolus vulgaris HOM05D006139 ORTHO05D007681 8.7e-231 803.9 632 65.2
CAN.G710.40 Capsicum annuum HOM05D006139 ORTHO05D007681 5.7e-230 801.2 626 65.8
FAN07G2792 Fragaria x ananassa HOM05D006139 ORTHO05D007681 3.7e-229 798.5 640 64.5
FAN17G0552 Fragaria x ananassa HOM05D006139 ORTHO05D007681 6.9e-228 794.3 630 65.4
FAN12G0395 Fragaria x ananassa HOM05D006139 ORTHO05D007681 1.2e-227 793.5 642 64.6
Lj4A728T41 Lonicera japonica HOM05D006139 ORTHO05D007681 1.9e-225 786.2 588 69.0
ATR0609G005 Amborella trichopoda HOM05D006139 ORTHO05D007681 3.6e-224 781.9 631 61.8
arahy.Tifrunner.gnm1.ann1.JAL8JD Arachis hypogaea HOM05D006139 ORTHO05D007681 3.0e-223 778.9 638 63.8
BolC5t30234H Brassica oleracea HOM05D006139 ORTHO05D007681 4.3e-222 775.0 630 62.2
COL.COLO4_17513 Corchorus olitorius HOM05D006139 ORTHO05D007681 4.8e-221 771.5 645 62.3
AUR62018029 Chenopodium quinoa HOM05D006139 ORTHO05D007681 1.4e-220 770.0 651 61.6
BraA06t24447Z Brassica rapa HOM05D006139 ORTHO05D007681 4.1e-220 768.5 627 61.9
vmacro13984 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 5.1e-215 751.5 741 56.3
AUR62003718 Chenopodium quinoa HOM05D006139 ORTHO05D007681 7.0e-212 741.1 616 62.3
Haze_11079 Corylus avellana HOM05D006139 ORTHO05D007681 1.1e-209 733.8 630 61.9
MBI07_g00628_MAGBIO Magnolia biondii HOM05D006139 ORTHO05D007681 4.7e-200 701.8 630 58.9
Nitab4.5_0001687g0050 Nicotiana tabacum HOM05D006139 ORTHO05D007681 6.8e-199 698.0 589 61.6
Nitab4.5_0001526g0130 Nicotiana tabacum HOM05D006139 ORTHO05D007681 1.8e-196 689.9 642 57.6
Peaxi162Scf00286g00443 Petunia axillaris HOM05D006139 ORTHO05D007681 1.3e-194 683.7 627 60.1
ClCG07G016640 Citrullus lanatus HOM05D006139 ORTHO05D007681 1.0e-183 647.5 655 56.5
Oeu013397.2 Olea europaea HOM05D006139 ORTHO05D007681 2.7e-179 632.9 428 73.6
Mapoly0113s0020 Marchantia polymorpha HOM05D006139 ORTHO05D007681 1.0e-170 604.4 627 49.9
SMO361G0513 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 9.2e-164 581.3 566 52.7
SMO361G0769 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 2.3e-162 576.6 566 52.3
HPP92_015930 Vanilla planifolia HOM05D006139 ORTHO05D007681 3.1e-159 566.2 439 64.9
AagrBONN_evm.TU.Sc2ySwM_228.1556 Anthoceros agrestis HOM05D006139 ORTHO05D007681 1.2e-142 511.1 630 44.9
CDE02G2779 Ceratophyllum demersum HOM05D006139 ORTHO05D007681 1.4e-140 504.2 441 60.1
CBR_g19434 Chara braunii HOM05D006139 ORTHO05D007681 1.4e-135 487.6 629 43.1
Pp3c18_7140 Physcomitrium patens HOM05D006139 ORTHO05D007681 6.9e-135 485.3 626 44.4
Cpa.g.sc77.50 Carica papaya HOM05D006139 ORTHO05D007681 6.4e-133 478.8 555 48.5
Aa31LG7G1410 Aethionema arabicum HOM05D006139 ORTHO05D007681 2.0e-126 457.2 627 43.5
Atru.chr2.2053 Acer truncatum HOM05D006139 ORTHO05D007681 2.5e-121 440.3 309 70.6
PGSC0003DMG400014069 Solanum tuberosum HOM05D006139 ORTHO05D007681 5.9e-118 429.1 289 73.7
SHI27652 Sapria himalayana HOM05D006139 ORTHO05D007681 1.6e-115 421.0 358 60.9
Atru.chr2.2052 Acer truncatum HOM05D006139 ORTHO05D007681 6.7e-114 415.6 273 75.5
TPR.G8868 Trifolium pratense HOM05D006139 ORTHO05D007681 3.1e-111 406.8 285 67.7
TPR.G8879 Trifolium pratense HOM05D006139 ORTHO05D007681 5.5e-108 396.0 296 68.2
SEGI_35314 Sequoiadendron giganteum HOM05D006139 ORTHO05D007681 1.5e-89 334.7 272 61.8
DCAR_005496 Daucus carota HOM05D006139 ORTHO05D007681 5.3e-87 326.2 230 70.9
DCAR_005495 Daucus carota HOM05D006139 ORTHO05D007681 2.0e-86 324.3 246 67.9
Ca_11423_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 7.7e-86 322.4 245 66.9
TPR.G8907 Trifolium pratense HOM05D006139 ORTHO05D007681 6.3e-80 302.8 228 68.0
unitig_578.g15953 Utricularia gibba HOM05D006139 ORTHO05D007681 4.9e-72 276.6 250 57.6
Os07g0184900 Oryza sativa ssp. japonica HOM05D006139 ORTHO05D007681 4.9e-56 223.4 156 69.2
Cre13.g607500 Chlamydomonas reinhardtii HOM05D006139 ORTHO05D007681 1.1e-55 222.2 706 28.9
Ah.03g143030 Amaranthus hybridus HOM05D006139 ORTHO05D007681 1.9e-52 211.5 187 62.6
unitig_578.g15954 Utricularia gibba HOM05D006139 ORTHO05D004041 7.5e-49 199.5 171 61.4
FAN22G0061 Fragaria x ananassa HOM05D006139 ORTHO05D007681 2.9e-48 197.6 166 63.9
Cfa021664 Carpinus fangiana HOM05D006139 ORTHO05D007681 3.2e-47 194.1 617 28.2
Hund20183 Selenicereus undatus HOM05D006139 ORTHO05D007681 1.2e-46 192.2 188 58.0
Ca_11425_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 1.1e-39 169.1 135 66.7
arahy.Tifrunner.gnm1.ann1.6RHH59 Arachis hypogaea HOM05D006139 ORTHO05D007681 7.3e-36 156.4 130 61.5
Ca_11424_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 2.1e-35 154.8 106 70.8
MCO14G338 Micromonas commoda HOM05D006139 ORTHO05D007681 5.2e-34 150.2 709 26.0
CANSAT78G0600 Cannabis sativa HOM05D006139 ORTHO05D007681 2.4e-31 141.4 118 59.3
AUR62043732 Chenopodium quinoa HOM05D006139 ORTHO05D007681 1.7e-24 118.6 93 59.1
SEGI_31905 Sequoiadendron giganteum HOM05D006139 ORTHO05D007681 1.8e-21 108.6 74 64.9
HanXRQChr13g0406711 Helianthus annuus HOM05D006139 ORTHO05D007681 6.7e-21 106.7 57 86.0
Ah.03g143010 Amaranthus hybridus HOM05D006139 ORTHO05D007681 5.3e-18 97.1 133 40.6
BolC4t22161H Brassica oleracea HOM05D006139 ORTHO05D007681 2.9e-16 91.3 89 51.7
CARHR154100 Cardamine hirsuta HOM05D006139 ORTHO05D007681 2.1e-14 85.1 66 63.6
vmacro12608 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 3.5e-14 84.3 65 67.7
Zm00001eb114470 Zea mays HOM05D006139 ORTHO05D007681 1.3e-13 82.4 69 55.1
SEGI_11325 Sequoiadendron giganteum HOM05D006139 ORTHO05D007681 6.2e-11 73.6 66 50.0
Eucgr.L02132 Eucalyptus grandis HOM05D006139 ORTHO05D007681 1.1e-10 72.8 48 70.8
Potri.006G132501 Populus trichocarpa HOM05D006139 ORTHO05D007681 2.0e-09 68.6 78 52.6
Dinv25612 Davidia involucrata HOM05D000447 ORTHO05D007681 1.2e-06 59.3 72 52.8


User provided reference genes

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