Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA238G3020 Erigeron canadensis HOM05D006044 ORTHO05D007653 2.6e-65 251.9 128 100.0
Lsat_1_v5_gn_2_28381 Lactuca sativa HOM05D006044 ORTHO05D007653 8.7e-61 236.9 123 96.7
Lsat_1_v5_gn_2_111680 Lactuca sativa HOM05D006044 ORTHO05D007653 3.3e-60 235.0 123 95.1
HanXRQChr14g0453721 Helianthus annuus HOM05D006044 ORTHO05D007653 1.3e-59 233.0 123 94.3
HanXRQChr07g0196181 Helianthus annuus HOM05D006044 ORTHO05D007653 2.1e-59 232.3 123 94.3
Peaxi162Scf00021g02522 Petunia axillaris HOM05D006044 ORTHO05D007653 4.0e-58 228.0 122 92.6
arahy.Tifrunner.gnm1.ann1.6RB8S0 Arachis hypogaea HOM05D006044 ORTHO05D007653 9.0e-58 226.9 122 91.0
arahy.Tifrunner.gnm1.ann1.L4QR06 Arachis hypogaea HOM05D006044 ORTHO05D007653 9.0e-58 226.9 122 91.0
Cc03_g11600 Coffea canephora HOM05D006044 ORTHO05D007653 9.0e-58 226.9 124 92.7
Nitab4.5_0000069g0030 Nicotiana tabacum HOM05D006044 ORTHO05D007653 9.0e-58 226.9 122 91.8
Nitab4.5_0011609g0020 Nicotiana tabacum HOM05D006044 ORTHO05D007653 9.0e-58 226.9 122 91.8
Manes.01G177500 Manihot esculenta HOM05D006044 ORTHO05D007653 1.2e-57 226.5 122 91.0
CSS0014603 Camellia sinensis var. sinensis HOM05D006044 ORTHO05D007653 1.5e-57 226.1 122 91.0
Cpa.g.sc157.53 Carica papaya HOM05D006044 ORTHO05D007653 1.5e-57 226.1 122 91.0
Potri.009G067500 Populus trichocarpa HOM05D006044 ORTHO05D007653 2.0e-57 225.7 124 89.5
Aa31LG3G15040 Aethionema arabicum HOM05D006044 ORTHO05D007653 2.6e-57 225.3 121 91.7
Nn7g36759 Nelumbo nucifera HOM05D006044 ORTHO05D007653 2.6e-57 225.3 122 90.2
TPR.G16400 Trifolium pratense HOM05D006044 ORTHO05D007653 2.6e-57 225.3 121 90.9
ATR0763G184 Amborella trichopoda HOM05D006044 ORTHO05D007653 3.4e-57 224.9 122 91.0
Potri.001G273200 Populus trichocarpa HOM05D006044 ORTHO05D007653 4.5e-57 224.6 124 88.7
Medtr5g089300 Medicago truncatula HOM05D006044 ORTHO05D007653 5.8e-57 224.2 121 90.1
Sc12g0010240 Simmondsia chinensis HOM05D006044 ORTHO05D007653 5.8e-57 224.2 122 90.2
TAR633G2719 Trochodendron aralioides HOM05D006044 ORTHO05D007653 5.8e-57 224.2 122 89.3
CANSAT11G0073 Cannabis sativa HOM05D006044 ORTHO05D007653 7.6e-57 223.8 121 90.1
CDE09G0744 Ceratophyllum demersum HOM05D006044 ORTHO05D007653 7.6e-57 223.8 122 89.3
Glyma.02G278800 Glycine max HOM05D006044 ORTHO05D007653 7.6e-57 223.8 122 89.3
LjContig00564g0010691 Lotus japonicus HOM05D006044 ORTHO05D007653 7.6e-57 223.8 123 88.6
Lalb_Chr10g0106211 Lupinus albus HOM05D006044 ORTHO05D007653 7.6e-57 223.8 122 89.3
Lalb_Chr17g0347851 Lupinus albus HOM05D006044 ORTHO05D007653 7.6e-57 223.8 122 89.3
Phvul.008G202000 Phaseolus vulgaris HOM05D006044 ORTHO05D007653 7.6e-57 223.8 122 89.3
VMungo0647G0704 Vigna mungo HOM05D006044 ORTHO05D007653 7.6e-57 223.8 122 89.3
Atru.chr3.2998 Acer truncatum HOM05D006044 ORTHO05D007653 1.0e-56 223.4 122 89.3
Ca_11896_v3 Cicer arietinum L. HOM05D006044 ORTHO05D007653 1.0e-56 223.4 121 90.1
Glyma.14G035900 Glycine max HOM05D006044 ORTHO05D007653 1.0e-56 223.4 122 88.5
Gohir.A13G218400 Gossypium hirsutum HOM05D006044 ORTHO05D007653 1.0e-56 223.4 122 89.3
Gohir.D13G222100 Gossypium hirsutum HOM05D006044 ORTHO05D007653 1.0e-56 223.4 122 89.3
Gorai.013G253200 Gossypium raimondii HOM05D006044 ORTHO05D007653 1.0e-56 223.4 122 89.3
Oeu032567.1 Olea europaea HOM05D006044 ORTHO05D007653 1.0e-56 223.4 118 92.4
Sabra09G0050500 Salix brachista HOM05D006044 ORTHO05D007653 1.0e-56 223.4 124 86.3
Hma1.2p1_0214F.1_g090800 Hydrangea macrophylla HOM05D006044 ORTHO05D007653 1.7e-56 222.6 123 91.1
Psat2g020640 Pisum sativum HOM05D006044 ORTHO05D007653 1.7e-56 222.6 121 89.3
SEGI_07566 Sequoiadendron giganteum HOM05D006044 ORTHO05D007653 1.7e-56 222.6 122 89.3
Ah.05g173120 Amaranthus hybridus HOM05D006044 ORTHO05D007653 2.2e-56 222.2 121 90.1
Ca_06201_v3 Cicer arietinum L. HOM05D006044 ORTHO05D007653 2.2e-56 222.2 121 89.3
QL01p016848 Quercus lobata HOM05D006044 ORTHO05D007653 2.2e-56 222.2 122 89.3
THA.LOC104811201 Tarenaya hassleriana HOM05D006044 ORTHO05D007653 2.2e-56 222.2 121 89.3
TWI75G0655 Tripterygium wilfordii HOM05D006044 ORTHO05D007653 2.2e-56 222.2 122 90.2
GSVIVG01037329001 Vitis vinifera HOM05D006044 ORTHO05D007653 2.2e-56 222.2 125 89.6
A03p05430 Brassica napus HOM05D006044 ORTHO05D007653 2.9e-56 221.9 121 90.1
C03p06320 Brassica napus HOM05D006044 ORTHO05D007653 2.9e-56 221.9 121 90.1
BolC3t13140H Brassica oleracea HOM05D006044 ORTHO05D007653 2.9e-56 221.9 121 90.1
BraA03t09881Z Brassica rapa HOM05D006044 ORTHO05D007653 2.9e-56 221.9 121 90.1
PSO339G3702 Papaver somniferum HOM05D006044 ORTHO05D007653 2.9e-56 221.9 122 89.3
PSO384G3308 Papaver somniferum HOM05D006044 ORTHO05D007653 2.9e-56 221.9 122 89.3
Prupe.1G025000 Prunus persica HOM05D006044 ORTHO05D007653 2.9e-56 221.9 122 88.5
Solyc01g008360.3 Solanum lycopersicum HOM05D006044 ORTHO05D007653 2.9e-56 221.9 118 91.5
Sopen01g003880 Solanum pennellii HOM05D006044 ORTHO05D007653 2.9e-56 221.9 118 91.5
PGSC0003DMG400016393 Solanum tuberosum HOM05D006044 ORTHO05D007653 2.9e-56 221.9 118 91.5
THA.LOC104799136 Tarenaya hassleriana HOM05D006044 ORTHO05D007653 3.8e-56 221.5 121 89.3
EL10Ac1g00766 Beta vulgaris HOM05D006044 ORTHO05D007653 4.9e-56 221.1 121 90.1
EL10Ac5g12840 Beta vulgaris HOM05D006044 ORTHO05D007653 4.9e-56 221.1 121 90.1
BolC9t59301H Brassica oleracea HOM05D004351 ORTHO05D005196 4.9e-56 221.1 121 89.3
Hma1.2p1_1357F.1_g277915 Hydrangea macrophylla HOM05D006044 ORTHO05D007653 4.9e-56 221.1 119 91.6
Rhsim13G0207900 Rhododendron simsii HOM05D006044 ORTHO05D007653 4.9e-56 221.1 122 89.3
A10p25610 Brassica napus HOM05D006044 ORTHO05D007653 6.5e-56 220.7 121 88.4
BraA10t44628Z Brassica rapa HOM05D006044 ORTHO05D007653 6.5e-56 220.7 121 88.4
Thhalv10015024m.g Eutrema salsugineum HOM05D006044 ORTHO05D007653 8.4e-56 220.3 121 89.3
Sp6g31450 Schrenkiella parvula HOM05D006044 ORTHO05D007653 8.4e-56 220.3 121 89.3
Thecc.09G247200 Theobroma cacao HOM05D006044 ORTHO05D007653 8.4e-56 220.3 121 88.4
CiPaw.14G111700 Carya illinoinensis HOM05D006044 ORTHO05D007653 1.1e-55 219.9 119 90.8
Mapoly0207s0011 Marchantia polymorpha HOM05D006044 ORTHO05D007653 1.1e-55 219.9 124 86.3
Prupe.1G400800 Prunus persica HOM05D006044 ORTHO05D007653 1.1e-55 219.9 122 87.7
unitig_27.g25012 Utricularia gibba HOM05D006044 ORTHO05D007653 1.1e-55 219.9 118 91.5
BcaB01g05427 Brassica carinata HOM05D006044 ORTHO05D007653 1.4e-55 219.5 121 89.3
FvH4_4g01940 Fragaria vesca HOM05D006044 ORTHO05D007653 1.4e-55 219.5 122 86.9
FAN12G1761 Fragaria x ananassa HOM05D006044 ORTHO05D007653 1.4e-55 219.5 122 86.9
FAN22G1152 Fragaria x ananassa HOM05D006044 ORTHO05D007653 1.4e-55 219.5 122 86.9
MD08G1047500 Malus domestica HOM05D006044 ORTHO05D007653 1.4e-55 219.5 122 87.7
RcHm_v2.0_Chr4g0388901 Rosa chinensis HOM05D006044 ORTHO05D007653 1.4e-55 219.5 122 86.9
SalBow8G2527 Salvia bowleyana HOM05D006044 ORTHO05D007653 1.4e-55 219.5 121 90.9
SGA_v2.0_scaffold310G48206 Striga asiatica HOM05D006044 ORTHO05D007653 1.4e-55 219.5 118 90.7
SGA_v2.0_scaffold3G01443 Striga asiatica HOM05D006044 ORTHO05D007653 1.4e-55 219.5 118 90.7
AUR62013740 Chenopodium quinoa HOM05D006044 ORTHO05D007653 1.9e-55 219.2 121 90.1
AUR62023411 Chenopodium quinoa HOM05D006044 ORTHO05D007653 1.9e-55 219.2 121 90.1
Cfa009890 Carpinus fangiana HOM05D006044 ORTHO05D007653 2.5e-55 218.8 119 89.9
ClCG02G022780 Citrullus lanatus HOM05D006044 ORTHO05D007653 2.5e-55 218.8 123 88.6
COL.COLO4_24488 Corchorus olitorius HOM05D006044 ORTHO05D007653 2.5e-55 218.8 121 87.6
Haze_23252 Corylus avellana HOM05D006044 ORTHO05D007653 2.5e-55 218.8 119 89.9
MELO3C014555.2 Cucumis melo HOM05D006044 ORTHO05D007653 2.5e-55 218.8 123 88.6
Eucgr.B03747 Eucalyptus grandis HOM05D006044 ORTHO05D007653 3.2e-55 218.4 121 88.4
PGR102G0082 Punica granatum HOM05D006044 ORTHO05D007653 4.2e-55 218.0 122 86.9
AL6G22970 Arabidopsis lyrata HOM05D006044 ORTHO05D007653 5.5e-55 217.6 121 88.4
AT5G12190 Arabidopsis thaliana HOM05D006044 ORTHO05D007653 5.5e-55 217.6 121 88.4
Carub.0006s1069 Capsella rubella HOM05D006044 ORTHO05D007653 5.5e-55 217.6 121 88.4
CDE08G0916 Ceratophyllum demersum HOM05D006044 ORTHO05D007653 7.1e-55 217.2 122 88.5
Migut.N02377 Erythranthe guttata HOM05D006044 ORTHO05D007653 9.3e-55 216.9 118 89.8
SalBow1G1993 Salvia bowleyana HOM05D006044 ORTHO05D000010 9.3e-55 216.9 120 90.0
AagrBONN_evm.TU.Sc2ySwM_117.1592 Anthoceros agrestis HOM05D006044 ORTHO05D007653 1.6e-54 216.1 122 86.1
Ciclev10017186m.g Citrus clementina HOM05D006044 ORTHO05D007653 1.6e-54 216.1 122 86.1
MBI19_g20794_MAGBIO Magnolia biondii HOM05D006044 ORTHO05D007653 2.1e-54 215.7 119 88.2
Pp3c1_15740 Physcomitrium patens HOM05D006044 ORTHO05D007653 4.6e-54 214.5 118 88.1
unitig_699.g19149 Utricularia gibba HOM05D006044 ORTHO05D007653 7.9e-54 213.8 118 90.7
Aqoxy2G00401 Aquilegia oxysepala HOM05D006044 ORTHO05D007653 1.3e-53 213.0 119 87.4
Dinv09443 Davidia involucrata HOM05D006044 ORTHO05D007653 1.3e-53 213.0 115 92.2
Os03g0811700 Oryza sativa ssp. japonica HOM05D006044 ORTHO05D007653 2.3e-53 212.2 121 86.8
Dinv37467 Davidia involucrata HOM05D006044 ORTHO05D007653 3.9e-53 211.5 115 91.3
Nn017s41474 Nelumbo nucifera HOM05D006044 ORTHO05D007653 3.9e-53 211.5 115 90.4
BcaNung07015 Brassica carinata HOM05D006044 ORTHO05D007653 4.3e-52 208.0 113 90.3
CBR_g501 Chara braunii HOM05D006044 ORTHO05D007653 4.3e-52 208.0 117 86.3
HPP92_019149 Vanilla planifolia HOM05D006044 ORTHO05D007653 4.3e-52 208.0 118 84.7
Zm00001eb062150 Zea mays HOM05D006044 ORTHO05D007653 1.6e-51 206.1 121 83.5
Zm00001eb212190 Zea mays HOM05D006044 ORTHO05D007653 2.1e-51 205.7 121 83.5
CARHR200930 Cardamine hirsuta HOM05D006044 ORTHO05D007653 4.8e-51 204.5 121 82.6
Ca_07394_v3 Cicer arietinum L. HOM05D006044 ORTHO05D007653 4.1e-50 201.4 121 83.5
Aqoxy2G00402 Aquilegia oxysepala HOM05D006044 ORTHO05D007653 7.1e-47 190.7 122 73.8
AL3G46680 Arabidopsis lyrata HOM05D006044 ORTHO05D007653 6.1e-46 187.6 116 75.9
CSS0031497 Camellia sinensis var. sinensis HOM05D006044 ORTHO05D007653 1.3e-45 186.4 136 70.6
SMO143G0133 Selaginella moellendorffii HOM05D006044 ORTHO05D007653 3.9e-45 184.9 120 77.5
MD13G1049300 Malus domestica HOM05D006044 ORTHO05D007653 1.3e-43 179.9 104 82.7
Cre03.g158950 Chlamydomonas reinhardtii HOM05D006044 ORTHO05D007653 1.4e-42 176.4 125 68.8
MCO15G700 Micromonas commoda HOM05D006044 ORTHO05D007653 1.4e-39 166.4 93 84.9
Duzib170G0372 Durio zibethinus HOM05D006044 ORTHO05D007653 6.1e-38 161.0 118 72.0
EL10Ac9g21533 Beta vulgaris HOM05D006044 ORTHO05D007653 8.2e-35 150.6 89 84.3
PRCOL_00006242 Prasinoderma coloniale HOM05D006044 ORTHO05D007653 1.9e-31 139.4 109 58.7
Haze_26695 Corylus avellana HOM05D006044 ORTHO05D007653 1.4e-29 133.3 113 52.2
AT2G14870 Arabidopsis thaliana HOM05D006044 ORTHO05D007653 2.5e-23 112.5 70 71.4
SGA_v2.0_scaffold34G13906 Striga asiatica HOM05D006044 ORTHO05D007653 9.7e-20 100.5 99 53.5
SalBow1G3729 Salvia bowleyana HOM05D006044 ORTHO05D357234 5.0e-16 88.2 44 95.5
SGA_v2.0_scaffold5G02950 Striga asiatica HOM05D006044 ORTHO05D007653 8.0e-14 80.9 75 56.0
Sed0014227 Sechium edule HOM05D000604 ORTHO05D004856 8.5e-08 60.8 121 33.9
SGA_v2.0_scaffold198G41064 Striga asiatica HOM05D006044 ORTHO05D400222 1.1e-07 60.5 98 39.8
Pp3c14_2340 Physcomitrium patens HOM05D006044 ORTHO05D318821 1.9e-07 59.7 31 83.9
Dinv40333 Davidia involucrata HOM05D001413 ORTHO05D001385 4.2e-07 58.5 80 40.0
Mapoly0042s0009 Marchantia polymorpha HOM05D000142 ORTHO05D001253 4.2e-07 58.5 96 34.4
PGR102G3118 Punica granatum HOM05D002411 ORTHO05D002564 9.4e-07 57.4 84 39.3
COL.COLO4_11167 Corchorus olitorius HOM05D002411 ORTHO05D002564 1.6e-06 56.6 75 36.0
Glyma.14G115100 Glycine max HOM05D005326 ORTHO05D006734 1.6e-06 56.6 92 34.8
Gorai.003G183300 Gossypium raimondii HOM05D000142 ORTHO05D003173 1.6e-06 56.6 92 32.6
AL1G12240 Arabidopsis lyrata HOM05D001413 ORTHO05D001385 2.1e-06 56.2 74 37.8
Cre01.g024200 Chlamydomonas reinhardtii HOM05D004266 ORTHO05D005151 2.1e-06 56.2 89 29.2
Dinv30820 Davidia involucrata HOM05D001413 ORTHO05D001385 2.1e-06 56.2 89 37.1
Duzib150G0537 Durio zibethinus HOM05D002411 ORTHO05D002564 2.1e-06 56.2 75 36.0
Duzib168G0560 Durio zibethinus HOM05D002411 ORTHO05D002564 2.1e-06 56.2 75 36.0
Potri.005G024600 Populus trichocarpa HOM05D001413 ORTHO05D001385 2.1e-06 56.2 64 46.9
Thecc.09G359100 Theobroma cacao HOM05D002411 ORTHO05D002564 2.1e-06 56.2 75 36.0
GSVIVG01012163001 Vitis vinifera HOM05D000604 ORTHO05D004856 2.7e-06 55.8 95 32.6
AL6G15620 Arabidopsis lyrata HOM05D000604 ORTHO05D004856 4.7e-06 55.1 73 39.7
FAN21G1851 Fragaria x ananassa HOM05D005326 ORTHO05D006734 4.7e-06 55.1 96 34.4
Lalb_Chr19g0132151 Lupinus albus HOM05D000604 ORTHO05D004856 4.7e-06 55.1 99 30.3
unitig_699.g19203 Utricularia gibba HOM05D005326 ORTHO05D006734 4.7e-06 55.1 96 33.3
Aqoxy1G01640 Aquilegia oxysepala HOM05D005326 ORTHO05D006734 6.1e-06 54.7 96 32.3
Aqoxy2G00917 Aquilegia oxysepala HOM05D005326 ORTHO05D006734 6.1e-06 54.7 96 32.3
Cc09_g04940 Coffea canephora HOM05D000604 ORTHO05D004856 6.1e-06 54.7 89 37.1
Haze_04929 Corylus avellana HOM05D001413 ORTHO05D001385 6.1e-06 54.7 78 41.0
Haze_04930 Corylus avellana HOM05D001413 ORTHO05D001385 6.1e-06 54.7 78 41.0
FvH4_3g38440 Fragaria vesca HOM05D005326 ORTHO05D006734 6.1e-06 54.7 96 33.3
FAN11G3572 Fragaria x ananassa HOM05D005326 ORTHO05D006734 6.1e-06 54.7 96 33.3
FAN16G2933 Fragaria x ananassa HOM05D005326 ORTHO05D006734 6.1e-06 54.7 96 33.3
FAN25G3125 Fragaria x ananassa HOM05D005326 ORTHO05D006734 6.1e-06 54.7 96 33.3
Hund21715 Selenicereus undatus HOM05D001413 ORTHO05D001385 6.1e-06 54.7 99 33.3
SGA_v2.0_scaffold25G10780 Striga asiatica HOM05D000142 ORTHO05D001253 6.1e-06 54.7 78 35.9
Gohir.A03G000053 Gossypium hirsutum HOM05D000142 ORTHO05D003173 8.0e-06 54.3 92 31.5
Gohir.D03G172600 Gossypium hirsutum HOM05D000142 ORTHO05D003173 8.0e-06 54.3 90 31.1


User provided reference genes

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