Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G1311 Erigeron canadensis HOM05D000399 ORTHO05D000304 9.8e-80 300.1 150 100.0
ECA232G4647 Erigeron canadensis HOM05D000399 ORTHO05D000304 1.5e-19 100.1 134 47.0
HanXRQChr16g0511821 Helianthus annuus HOM05D000399 ORTHO05D000304 9.7e-19 97.4 145 42.8
Lalb_Chr15g0088811 Lupinus albus HOM05D000399 ORTHO05D000304 2.2e-18 96.3 139 41.7
Lalb_Chr20g0120111 Lupinus albus HOM05D000399 ORTHO05D000304 8.2e-18 94.4 142 40.1
VMungo1383G1425 Vigna mungo HOM05D000399 ORTHO05D000304 8.2e-18 94.4 139 42.4
Lsat_1_v5_gn_0_14701 Lactuca sativa HOM05D000399 ORTHO05D000304 2.4e-17 92.8 132 44.7
Phvul.008G129500 Phaseolus vulgaris HOM05D000399 ORTHO05D000304 3.1e-17 92.4 139 42.4
ECA232G2408 Erigeron canadensis HOM05D000399 ORTHO05D000304 4.1e-17 92.0 140 42.9
Glyma.09G025400 Glycine max HOM05D000399 ORTHO05D000304 5.3e-17 91.7 139 41.0
arahy.Tifrunner.gnm1.ann1.T4IIR2 Arachis hypogaea HOM05D000399 ORTHO05D000304 9.0e-17 90.9 152 39.5
Lalb_Chr18g0058051 Lupinus albus HOM05D000399 ORTHO05D000304 1.2e-16 90.5 139 40.3
CARHR077330 Cardamine hirsuta HOM05D000399 ORTHO05D000304 2.6e-16 89.4 139 38.8
FvH4_6g00200 Fragaria vesca HOM05D000399 ORTHO05D000304 2.6e-16 89.4 139 41.0
FAN09G4699 Fragaria x ananassa HOM05D000399 ORTHO05D000304 2.6e-16 89.4 139 41.0
FAN14G1038 Fragaria x ananassa HOM05D000399 ORTHO05D000304 2.6e-16 89.4 139 41.0
RcHm_v2.0_Chr3g0447571 Rosa chinensis HOM05D000399 ORTHO05D000304 2.6e-16 89.4 139 41.0
Lj2C166G3 Lonicera japonica HOM05D000399 ORTHO05D000304 3.4e-16 89.0 132 41.7
FAN09G4083 Fragaria x ananassa HOM05D000399 ORTHO05D000304 4.5e-16 88.6 139 41.0
Phvul.006G127200 Phaseolus vulgaris HOM05D000399 ORTHO05D000304 4.5e-16 88.6 144 38.9
FvH4_6g37440 Fragaria vesca HOM05D000399 ORTHO05D000304 5.9e-16 88.2 139 40.3
FAN14G3549 Fragaria x ananassa HOM05D000399 ORTHO05D000304 5.9e-16 88.2 139 40.3
Phvul.006G127100 Phaseolus vulgaris HOM05D000399 ORTHO05D000304 5.9e-16 88.2 159 38.4
VMungo0540G1266 Vigna mungo HOM05D000399 ORTHO05D000304 5.9e-16 88.2 142 40.1
AT3G03300 Arabidopsis thaliana HOM05D000399 ORTHO05D000304 7.6e-16 87.8 139 38.8
Glyma.09G025300 Glycine max HOM05D000399 ORTHO05D000304 1.0e-15 87.4 132 42.4
Cc09_g03980 Coffea canephora HOM05D000399 ORTHO05D000304 1.7e-15 86.7 132 43.9
AL3G12920 Arabidopsis lyrata HOM05D000399 ORTHO05D000304 2.2e-15 86.3 139 38.1
Dinv21364 Davidia involucrata HOM05D000399 ORTHO05D000304 2.2e-15 86.3 128 42.2
FAN05G1165 Fragaria x ananassa HOM05D000399 ORTHO05D000304 2.2e-15 86.3 139 39.6
Potri.008G075900 Populus trichocarpa HOM05D000399 ORTHO05D000304 2.9e-15 85.9 165 36.4
Actinidia34702 Actinidia chinensis HOM05D000399 ORTHO05D000304 3.8e-15 85.5 128 41.4
Aa31LG5G13760 Aethionema arabicum HOM05D000399 ORTHO05D000304 5.0e-15 85.1 139 37.4
Aa31LG5G13800 Aethionema arabicum HOM05D005923 ORTHO05D000304 5.0e-15 85.1 139 37.4
Aa31LG5G13830 Aethionema arabicum HOM05D000399 ORTHO05D000304 5.0e-15 85.1 139 37.4
C05p63490 Brassica napus HOM05D000399 ORTHO05D000304 5.0e-15 85.1 139 38.8
BolC5t35013H Brassica oleracea HOM05D000399 ORTHO05D000304 5.0e-15 85.1 139 38.8
Sabra08G0056600 Salix brachista HOM05D000399 ORTHO05D000304 5.0e-15 85.1 132 40.9
Actinidia34701 Actinidia chinensis HOM05D000399 ORTHO05D000304 8.5e-15 84.3 127 40.9
arahy.Tifrunner.gnm1.ann1.J1H6RV Arachis hypogaea HOM05D000399 ORTHO05D000304 8.5e-15 84.3 152 37.5
PGR031G1259 Punica granatum HOM05D000399 ORTHO05D000304 8.5e-15 84.3 138 39.9
QL01p047991 Quercus lobata HOM05D000399 ORTHO05D000304 1.1e-14 84.0 139 38.8
Sabra10G0139100 Salix brachista HOM05D000399 ORTHO05D000304 1.4e-14 83.6 132 40.9
Atru.chr12.1701 Acer truncatum HOM05D000399 ORTHO05D000304 1.9e-14 83.2 139 38.1
PGR031G2252 Punica granatum HOM05D000399 ORTHO05D000304 1.9e-14 83.2 139 39.6
BcaC05g30305 Brassica carinata HOM05D000399 ORTHO05D000304 2.5e-14 82.8 139 38.1
CSS0003153 Camellia sinensis var. sinensis HOM05D000399 ORTHO05D000304 2.5e-14 82.8 132 40.2
Potri.010G181400 Populus trichocarpa HOM05D000399 ORTHO05D000304 2.5e-14 82.8 132 39.4
Prupe.6G363600 Prunus persica HOM05D000399 ORTHO05D000304 2.5e-14 82.8 141 38.3
Rhsim05G0165200 Rhododendron simsii HOM05D000399 ORTHO05D000304 2.5e-14 82.8 122 41.8
Thecc.05G187300 Theobroma cacao HOM05D000399 ORTHO05D000304 2.5e-14 82.8 132 39.4
A05p43890 Brassica napus HOM05D000399 ORTHO05D000304 3.2e-14 82.4 139 38.1
BraA05t23126Z Brassica rapa HOM05D000399 ORTHO05D000304 3.2e-14 82.4 139 38.1
Lj2C165T13 Lonicera japonica HOM05D000399 ORTHO05D000304 3.2e-14 82.4 105 46.7
Duzib268G0367 Durio zibethinus HOM05D000399 ORTHO05D000304 4.2e-14 82.0 132 39.4
MD04G1247300 Malus domestica HOM05D000399 ORTHO05D000304 4.2e-14 82.0 139 38.1
Manes.12G002750 Manihot esculenta HOM05D000399 ORTHO05D000304 4.2e-14 82.0 139 36.7
Lj6g0004869 Lotus japonicus HOM05D000399 ORTHO05D000304 5.5e-14 81.6 132 40.2
Prupe.7G047900 Prunus persica HOM05D000399 ORTHO05D000304 5.5e-14 81.6 140 40.7
Duzib251G0658 Durio zibethinus HOM05D000399 ORTHO05D000304 7.2e-14 81.3 132 39.4
Thhalv10019898m.g Eutrema salsugineum HOM05D000399 ORTHO05D000304 7.2e-14 81.3 144 36.8
Manes.12G003000 Manihot esculenta HOM05D000399 ORTHO05D000304 7.2e-14 81.3 139 36.7
CiPaw.08G112900 Carya illinoinensis HOM05D000399 ORTHO05D000304 9.3e-14 80.9 139 41.0
Cc02_g14930 Coffea canephora HOM05D000399 ORTHO05D000304 9.3e-14 80.9 133 42.1
Lj2g0005366 Lotus japonicus HOM05D000399 ORTHO05D000304 1.2e-13 80.5 132 39.4
Lj6g0009999 Lotus japonicus HOM05D000399 ORTHO05D000304 1.2e-13 80.5 132 39.4
Carub.0003s0246 Capsella rubella HOM05D000399 ORTHO05D000304 1.6e-13 80.1 139 36.7
ClCG03G010530 Citrullus lanatus HOM05D000399 ORTHO05D000304 2.1e-13 79.7 145 37.2
Gohir.D01G117500 Gossypium hirsutum HOM05D000399 ORTHO05D000304 2.1e-13 79.7 132 38.6
Gorai.002G143000 Gossypium raimondii HOM05D000399 ORTHO05D000304 2.1e-13 79.7 132 38.6
TWI36G1251 Tripterygium wilfordii HOM05D000399 ORTHO05D000304 2.1e-13 79.7 135 40.0
GSVIVG01019052001 Vitis vinifera HOM05D000399 ORTHO05D000304 2.1e-13 79.7 132 38.6
CiPaw.07G083000 Carya illinoinensis HOM05D000399 ORTHO05D000304 2.7e-13 79.3 139 39.6
Cc02_g14920 Coffea canephora HOM05D000399 ORTHO05D000304 2.7e-13 79.3 133 41.4
VMungo0540G1463 Vigna mungo HOM05D000399 ORTHO05D000304 2.7e-13 79.3 89 46.1
EL10Ac4g10011 Beta vulgaris HOM05D000399 ORTHO05D000304 3.6e-13 79.0 122 38.5
CDE12G0733 Ceratophyllum demersum HOM05D000399 ORTHO05D000304 3.6e-13 79.0 152 35.5
Haze_07648 Corylus avellana HOM05D000399 ORTHO05D000304 3.6e-13 79.0 132 39.4
CANSAT54G0243 Cannabis sativa HOM05D000399 ORTHO05D000304 4.6e-13 78.6 139 38.8
Ciclev10010912m.g Citrus clementina HOM05D000399 ORTHO05D000304 4.6e-13 78.6 139 36.0
Eucgr.B01461 Eucalyptus grandis HOM05D000399 ORTHO05D000304 4.6e-13 78.6 132 37.1
Hund07367 Selenicereus undatus HOM05D000399 ORTHO05D000304 4.6e-13 78.6 82 48.8
MSTRG.8199 Avicennia marina HOM05D000399 ORTHO05D000304 6.1e-13 78.2 142 38.0
Cfa019273 Carpinus fangiana HOM05D000399 ORTHO05D000304 6.1e-13 78.2 132 39.4
Aqoxy3G03689 Aquilegia oxysepala HOM05D000399 ORTHO05D000304 7.9e-13 77.8 76 51.3
Medtr8g069975 Medicago truncatula HOM05D000399 ORTHO05D000304 7.9e-13 77.8 139 38.1
THA.LOC104820849 Tarenaya hassleriana HOM05D000399 ORTHO05D000304 7.9e-13 77.8 139 36.7
TPR.G26322 Trifolium pratense HOM05D000399 ORTHO05D000304 7.9e-13 77.8 113 46.0
TPR.G29787 Trifolium pratense HOM05D000399 ORTHO05D000304 7.9e-13 77.8 132 39.4
BcaC05g29882 Brassica carinata HOM05D000399 ORTHO05D000304 1.0e-12 77.4 115 39.1
BolC5t35015H Brassica oleracea HOM05D000399 ORTHO05D000304 1.0e-12 77.4 115 39.1
Cfa006239 Carpinus fangiana HOM05D000399 ORTHO05D000304 1.0e-12 77.4 134 38.8
AUR62000283 Chenopodium quinoa HOM05D000399 ORTHO05D000304 1.0e-12 77.4 122 38.5
Haze_04594 Corylus avellana HOM05D000399 ORTHO05D000304 1.0e-12 77.4 123 39.8
Psat1g166800 Pisum sativum HOM05D000399 ORTHO05D000304 1.0e-12 77.4 139 36.7
Solyc11g008520.3 Solanum lycopersicum HOM05D000399 ORTHO05D000304 1.0e-12 77.4 135 37.0
Sopen11g004310 Solanum pennellii HOM05D000399 ORTHO05D000304 1.0e-12 77.4 135 37.0
unitig_26.g9215 Utricularia gibba HOM05D000399 ORTHO05D000304 1.0e-12 77.4 133 36.8
Ca_00852_v3 Cicer arietinum L. HOM05D000399 ORTHO05D000304 1.4e-12 77.0 138 38.4
Migut.F01854 Erythranthe guttata HOM05D000399 ORTHO05D000304 1.4e-12 77.0 132 38.6
Cfa006237 Carpinus fangiana HOM05D000399 ORTHO05D000304 1.8e-12 76.6 128 39.1
Manes.12G002800 Manihot esculenta HOM05D000399 ORTHO05D000304 1.8e-12 76.6 139 35.3
TPR.G9044 Trifolium pratense HOM05D000399 ORTHO05D000304 1.8e-12 76.6 132 39.4
Ciclev10010911m.g Citrus clementina HOM05D000399 ORTHO05D000304 2.3e-12 76.3 139 36.0
MELO3C010042.2 Cucumis melo HOM05D000399 ORTHO05D000304 2.3e-12 76.3 114 43.0
Oeu034687.1 Olea europaea HOM05D000399 ORTHO05D000304 2.3e-12 76.3 132 37.9
AUR62006631 Chenopodium quinoa HOM05D000399 ORTHO05D000304 3.0e-12 75.9 122 36.9
vmacro19543 Vaccinium macrocarpon HOM05D000399 ORTHO05D000304 3.0e-12 75.9 135 37.8
Gohir.A01G133600 Gossypium hirsutum HOM05D000399 ORTHO05D000304 3.9e-12 75.5 132 37.1
Medtr2g030490 Medicago truncatula HOM05D000399 ORTHO05D000304 3.9e-12 75.5 139 38.1
Prupe.7G047700 Prunus persica HOM05D000399 ORTHO05D000304 3.9e-12 75.5 121 40.5
Cc06_g19770 Coffea canephora HOM05D000399 ORTHO05D000304 5.1e-12 75.1 133 39.1
CsaV3_1G044420 Cucumis sativus L. HOM05D000399 ORTHO05D000304 5.1e-12 75.1 142 35.9
Nitab4.5_0019786g0010 Nicotiana tabacum HOM05D000399 ORTHO05D000304 5.1e-12 75.1 126 38.1
Dinv21363 Davidia involucrata HOM05D000399 ORTHO05D000304 8.8e-12 74.3 127 38.6
Prupe.7G048000 Prunus persica HOM05D000399 ORTHO05D000304 8.8e-12 74.3 160 36.2
Gohir.A04G036700 Gossypium hirsutum HOM05D000399 ORTHO05D000304 1.1e-11 73.9 126 37.3
Gorai.009G374900 Gossypium raimondii HOM05D000399 ORTHO05D000304 1.1e-11 73.9 132 36.4
Gohir.D05G348400 Gossypium hirsutum HOM05D000399 ORTHO05D000304 1.5e-11 73.6 126 37.3
Nitab4.5_0001003g0020 Nicotiana tabacum HOM05D000399 ORTHO05D000304 1.5e-11 73.6 122 37.7
Sopen11g004330 Solanum pennellii HOM05D000399 ORTHO05D000304 1.9e-11 73.2 135 35.6
TPR.G26365 Trifolium pratense HOM05D000399 ORTHO05D000304 1.9e-11 73.2 130 37.7
CDE05G2430 Ceratophyllum demersum HOM05D000399 ORTHO05D000304 2.5e-11 72.8 73 46.6
Dinv21369 Davidia involucrata HOM05D000399 ORTHO05D000304 2.5e-11 72.8 76 48.7
PSO170G4397 Papaver somniferum HOM05D000399 ORTHO05D000304 2.5e-11 72.8 76 48.7
Cc02_g14910 Coffea canephora HOM05D000399 ORTHO05D000304 3.3e-11 72.4 127 37.8
Haze_04593 Corylus avellana HOM05D000399 ORTHO05D008029 4.3e-11 72.0 144 38.2
Solyc11g008540.3 Solanum lycopersicum HOM05D000399 ORTHO05D000304 4.3e-11 72.0 135 34.8
Sopen06g015290 Solanum pennellii HOM05D000399 ORTHO05D000304 4.3e-11 72.0 135 34.8
Medtr1g060740 Medicago truncatula HOM05D000399 ORTHO05D000304 5.7e-11 71.6 139 35.3
Sc06g0004990 Simmondsia chinensis HOM05D000399 ORTHO05D000304 5.7e-11 71.6 132 36.4
VMungo0540G2272 Vigna mungo HOM05D000399 ORTHO05D000304 5.7e-11 71.6 123 38.2
Solyc06g048960.4 Solanum lycopersicum HOM05D000399 ORTHO05D000304 7.4e-11 71.2 122 36.1
ATR0582G119 Amborella trichopoda HOM05D000399 ORTHO05D000304 9.7e-11 70.9 136 34.6
Solyc11g008530.3 Solanum lycopersicum HOM05D000399 ORTHO05D000304 9.7e-11 70.9 132 36.4
SalBow6G2829 Salvia bowleyana HOM05D000399 ORTHO05D000304 1.3e-10 70.5 74 47.3
PGSC0003DMG400016641 Solanum tuberosum HOM05D000399 ORTHO05D000304 1.3e-10 70.5 122 36.1
SHI23152 Sapria himalayana HOM05D000399 ORTHO05D000304 1.7e-10 70.1 137 34.3
Actinidia31352 Actinidia chinensis HOM05D000399 ORTHO05D000304 2.2e-10 69.7 129 38.8
Gohir.A04G036500 Gossypium hirsutum HOM05D000399 ORTHO05D000304 2.8e-10 69.3 126 35.7
Peaxi162Scf00296g00099 Petunia axillaris HOM05D000399 ORTHO05D000304 2.8e-10 69.3 132 37.1
TAR374G0118 Trochodendron aralioides HOM05D000399 ORTHO05D000304 2.8e-10 69.3 123 36.6
CAN.G321.26 Capsicum annuum HOM05D000399 ORTHO05D000304 3.7e-10 68.9 73 47.9
SalBow6G0953 Salvia bowleyana HOM05D000399 ORTHO05D000304 3.7e-10 68.9 112 42.0
CAN.G321.25 Capsicum annuum HOM05D000399 ORTHO05D000304 4.8e-10 68.6 76 44.7
CiPaw.08G113600 Carya illinoinensis HOM05D000399 ORTHO05D000304 4.8e-10 68.6 138 37.7
HPP92_020099 Vanilla planifolia HOM05D000399 ORTHO05D000304 4.8e-10 68.6 133 36.1
FAN05G5393 Fragaria x ananassa HOM05D000399 ORTHO05D000304 6.3e-10 68.2 133 36.8
Nn4g22037 Nelumbo nucifera HOM05D000399 ORTHO05D000304 8.2e-10 67.8 132 35.6
Cc06_g19980 Coffea canephora HOM05D000399 ORTHO05D000304 1.1e-09 67.4 75 46.7
SHI13689 Sapria himalayana HOM05D000399 ORTHO05D000304 1.1e-09 67.4 147 33.3
Ah.04g159150 Amaranthus hybridus HOM05D000399 ORTHO05D000304 1.4e-09 67.0 132 34.8
Lj1g0009784 Lotus japonicus HOM05D000399 ORTHO05D000304 1.8e-09 66.6 76 47.4
MBI07_g11056_MAGBIO Magnolia biondii HOM05D000399 ORTHO05D000304 1.8e-09 66.6 152 34.2
Dinv21362 Davidia involucrata HOM05D000399 ORTHO05D000304 2.4e-09 66.2 110 40.0
MD12G1087600 Malus domestica HOM05D000399 ORTHO05D000304 2.4e-09 66.2 86 44.2
Sopen11g004320 Solanum pennellii HOM05D000399 ORTHO05D000304 2.4e-09 66.2 132 35.6
SalBow7G3435 Salvia bowleyana HOM05D000399 ORTHO05D000304 3.1e-09 65.9 70 45.7
CiPaw.08G113700 Carya illinoinensis HOM05D000399 ORTHO05D000304 6.9e-09 64.7 138 37.0
Phvul.006G111800 Phaseolus vulgaris HOM05D000399 ORTHO05D000304 6.9e-09 64.7 133 36.1
Glyma.19G254900 Glycine max HOM05D000399 ORTHO05D000304 5.9e-08 61.6 87 39.1
MD14G1082800 Malus domestica HOM05D000399 ORTHO05D000304 1.0e-07 60.8 79 43.0
SalBow7G4454 Salvia bowleyana HOM05D000399 ORTHO05D000304 1.7e-07 60.1 74 40.5
arahy.Tifrunner.gnm1.ann1.02FWCT Arachis hypogaea HOM05D000399 ORTHO05D000304 2.2e-07 59.7 105 35.2
arahy.Tifrunner.gnm1.ann1.MX0L3B Arachis hypogaea HOM05D000399 ORTHO05D000304 2.2e-07 59.7 105 35.2
SalBow7G3580 Salvia bowleyana HOM05D000399 ORTHO05D000304 2.2e-07 59.7 80 38.8
arahy.Tifrunner.gnm1.ann1.5JB048 Arachis hypogaea HOM05D000399 ORTHO05D000304 1.1e-06 57.4 122 34.4
SEGI_27707 Sequoiadendron giganteum HOM05D000399 ORTHO05D000304 2.5e-06 56.2 68 42.6
arahy.Tifrunner.gnm1.ann1.3LM8QV Arachis hypogaea HOM05D000399 ORTHO05D000304 3.2e-06 55.8 113 34.5
DCAR_010108 Daucus carota HOM05D000399 ORTHO05D000304 5.5e-06 55.1 91 42.9
SEGI_22199 Sequoiadendron giganteum HOM05D000399 ORTHO05D000304 5.5e-06 55.1 97 32.0
Solyc01g014410.1 Solanum lycopersicum HOM05D000399 ORTHO05D000304 9.4e-06 54.3 64 46.9
Zm00001eb219700 Zea mays HOM05D000399 ORTHO05D000304 9.4e-06 54.3 78 33.3


User provided reference genes

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