Gene: Lj2g0005366

General Information

Structural Information

  • Species Lotus japonicus
  • Gene Identifier Lj2g0005366
  • Transcript Identifier Lj2g0005366.1
  • Gene Type Coding gene
  • Location chr2 : 64849780-64861288 : positive

Gene Family Information

  • ID HOM05D000399
  • #Genes/#Species 1254/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lj2g0005366.Lj1.0v1
  • pacid 44929311

Descriptions

  • Description K11592 - endoribonuclease Dicer (DICER1, DCR1)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
IEA
InterProRNA processing
GO:0051214
ISO
PLAZA Integrative OrthologyRNAi-mediated antiviral immunity against RNA virus AT3G03300
GO:0035196
ISO
PLAZA Integrative Orthologyproduction of miRNAs involved in gene silencing by miRNA AT3G03300
GO:0031047
ISO
PLAZA Integrative Orthologygene silencing by RNA Solyc11g008530.3
GO:0051607
ISO
PLAZA Integrative Orthologydefense response to virus AT3G03300
GO:0010216
ISO
PLAZA Integrative Orthologymaintenance of DNA methylation AT3G03300
GO:0010267
ISO
PLAZA Integrative Orthologyproduction of ta-siRNAs involved in RNA interference AT3G03300

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004525
IEA
InterProribonuclease III activity
GO:0005515
IEA
InterProprotein binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
InterProATP binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR000999 Ribonuclease III domain
IPR036389 Ribonuclease III, endonuclease domain superfamily
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR036085 PAZ domain superfamily
IPR003100 PAZ domain
IPR038248 Dicer dimerisation domain superfamily
IPR001650 Helicase, C-terminal
IPR011545 DEAD/DEAH box helicase domain
Mapman id Description
35.1 not assigned.annotated