Gene: Sopen11g004310

General Information

Description Encodes a Dicer-like protein that functions in the antiviral silencing response in turnip-crinkle virus-infected plants but not in TMV or CMV-strain-Y-infected plants. Involved in the production of ta-siRNAs. Partially antagonizes the production of miRNAs by DCL1. Substitutes for DCL4 to produce viral siRNA when DCL4 is missing or inhibited. Able to produce siRNAs but not miRNAs. | dicer-like 2 (DCL2) | FUNCTIONS IN: in 7 functions | INVOLVED IN: defense response to virus, maintenance of DNA methylation, production of ta-siRNAs involved in RNA interference | LOCATED IN: intracellular | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal , Double-stranded RNA-binding , Argonaute/Dicer protein, PAZ , Ribonuclease III , DEAD-like helicase, N-terminal , DNA/RNA helicase, C-terminal , Dicer double-stranded RNA-binding fold , Helicase, superfamily 1/2, ATP-binding domain | BEST Arabidopsis thaliana protein match is: dicer-like 4 ., Ribonuclease III

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006396	IEA	InterPro	RNA processing
GO:0031047	ISO	PLAZA Integrative Orthology	gene silencing by RNA	Solyc11g008520.3

GO term	Evidence(s)	Provider(s)	Description
GO:0004525	IEA	InterPro	ribonuclease III activity
GO:0005515	IEA	InterPro	protein binding
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0005524	IEA	InterPro	ATP binding

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR036389	Ribonuclease III, endonuclease domain superfamily
IPR000999	Ribonuclease III domain
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR003100	PAZ domain
IPR036085	PAZ domain superfamily
IPR038248	Dicer dimerisation domain superfamily
IPR011545	DEAD/DEAH box helicase domain
IPR001650	Helicase, C-terminal
IPR014001	Helicase superfamily 1/2, ATP-binding domain

Mapman id	Description
35.1	not assigned.annotated