Gene: Gohir.D01G117500
General Information
Structural Information
- Species Gossypium hirsutum
- Gene Identifier Gohir.D01G117500
- Transcript Identifier Gohir.D01G117500.2
- Gene Type Coding gene
- Location D01 : 26210611-26220038 : negative
Gene Family Information
- ID HOM05D000399
- #Genes/#Species 1254/98
- Phylogenetic origin
- ID ORTHO05D000304
- #Genes/#Species 1156/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Gohir.D01G117500.v2.1
- pacid 42374568
Descriptions
- Description K11592 - endoribonuclease Dicer (DICER1, DCR1)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006396 | IEA | InterPro | RNA processing | |
| GO:0051214 | ISO | PLAZA Integrative Orthology | RNAi-mediated antiviral immunity against RNA virus | AT3G03300 |
| GO:0035196 | ISO | PLAZA Integrative Orthology | production of miRNAs involved in gene silencing by miRNA | AT3G03300 |
| GO:0051607 | ISO | PLAZA Integrative Orthology | defense response to virus | AT3G03300 |
| GO:0010216 | ISO | PLAZA Integrative Orthology | maintenance of DNA methylation | AT3G03300 |
| GO:0010267 | ISO | PLAZA Integrative Orthology | production of ta-siRNAs involved in RNA interference | AT3G03300 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004525 | IEA | InterPro | ribonuclease III activity | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0016787 | IEA | InterPro | hydrolase activity | |
| GO:0005515 | IEA | InterPro | protein binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001650 | Helicase, C-terminal |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR036389 | Ribonuclease III, endonuclease domain superfamily |
| IPR000999 | Ribonuclease III domain |
| IPR006935 | Helicase/UvrB, N-terminal |
| IPR038248 | Dicer dimerisation domain superfamily |
| IPR003100 | PAZ domain |
| IPR036085 | PAZ domain superfamily |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR014720 | Double-stranded RNA-binding domain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |