Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib235G0168 Durio zibethinus HOM05D000904 ORTHO05D006931 1.4e-69 266.5 178 100.0
Gohir.D02G105600 Gossypium hirsutum HOM05D000904 ORTHO05D006931 2.4e-45 186.0 180 74.4
Duzib160G0493 Durio zibethinus HOM05D000904 ORTHO05D006931 7.6e-39 164.5 180 66.1
Thecc.06G017100 Theobroma cacao HOM05D000904 ORTHO05D006931 7.1e-37 157.9 183 69.9
Gorai.005G120000 Gossypium raimondii HOM05D000904 ORTHO05D006931 2.7e-36 156.0 180 66.1
Haze_09988 Corylus avellana HOM05D000904 ORTHO05D006931 7.9e-28 127.9 159 61.6
RcHm_v2.0_Chr7g0221411 Rosa chinensis HOM05D000904 ORTHO05D006931 1.3e-25 120.6 172 51.2
Ciclev10003415m.g Citrus clementina HOM05D000904 ORTHO05D006931 1.7e-25 120.2 160 58.8
Prupe.1G585000 Prunus persica HOM05D000904 ORTHO05D006931 2.2e-25 119.8 183 51.9
Cfa004448 Carpinus fangiana HOM05D000904 ORTHO05D006931 3.7e-25 119.0 161 64.0
RcHm_v2.0_Chr6g0272511 Rosa chinensis HOM05D000904 ORTHO05D006931 4.8e-25 118.6 181 44.2
Atru.chr3.2070 Acer truncatum HOM05D000904 ORTHO05D006931 6.3e-25 118.2 144 54.2
Atru.chr6.324 Acer truncatum HOM05D000904 ORTHO05D006931 6.3e-25 118.2 182 56.6
ClCG10G007450 Citrullus lanatus HOM05D000904 ORTHO05D006931 2.4e-24 116.3 179 54.2
COL.COLO4_22855 Corchorus olitorius HOM05D000904 ORTHO05D006931 4.1e-24 115.5 84 71.4
CsaV3_3G006640 Cucumis sativus L. HOM05D000904 ORTHO05D006931 5.3e-24 115.2 178 50.0
QL02p103277 Quercus lobata HOM05D000904 ORTHO05D006931 1.5e-23 113.6 157 64.3
MELO3C016469.2 Cucumis melo HOM05D000904 ORTHO05D006931 4.5e-23 112.1 178 50.0
MD15G1442200 Malus domestica HOM05D000904 ORTHO05D006931 5.9e-23 111.7 195 46.2
PGR042G3242 Punica granatum HOM05D000904 ORTHO05D006931 5.9e-23 111.7 180 57.8
CiPaw.05G001900 Carya illinoinensis HOM05D000904 ORTHO05D006931 7.7e-23 111.3 68 75.0
Sed0005680 Sechium edule HOM05D000904 ORTHO05D006931 7.7e-23 111.3 178 43.8
Ciclev10010745m.g Citrus clementina HOM05D000904 ORTHO05D006931 1.7e-22 110.2 67 79.1
FvH4_5g28020 Fragaria vesca HOM05D000904 ORTHO05D006931 1.9e-21 106.7 179 41.3
FAN18G0255 Fragaria x ananassa HOM05D000904 ORTHO05D006931 1.9e-21 106.7 179 41.3
THA.LOC104810192 Tarenaya hassleriana HOM05D000904 ORTHO05D006931 5.5e-21 105.1 183 55.7
CANSAT01G3012 Cannabis sativa HOM05D000904 ORTHO05D006931 7.2e-21 104.8 185 47.0
Manes.10G111800 Manihot esculenta HOM05D000904 ORTHO05D006931 9.4e-21 104.4 174 59.2
Ciclev10030365m.g Citrus clementina HOM05D000904 ORTHO05D006931 1.2e-20 104.0 64 78.1
SEGI_25881 Sequoiadendron giganteum HOM05D000904 ORTHO05D006931 1.6e-20 103.6 169 43.8
TWI59G0191 Tripterygium wilfordii HOM05D000904 ORTHO05D006931 2.1e-20 103.2 66 74.2
TAR628G1213 Trochodendron aralioides HOM05D000904 ORTHO05D006931 2.7e-20 102.8 66 72.7
Actinidia26193 Actinidia chinensis HOM05D000904 ORTHO05D006931 3.6e-20 102.4 174 52.9
Potri.004G228600 Populus trichocarpa HOM05D000904 ORTHO05D006931 3.6e-20 102.4 77 64.9
Rhsim05G0115600 Rhododendron simsii HOM05D000904 ORTHO05D006931 4.7e-20 102.1 111 56.8
Dinv29628 Davidia involucrata HOM05D000904 ORTHO05D006931 1.0e-19 100.9 66 69.7
Actinidia01633 Actinidia chinensis HOM05D000904 ORTHO05D006931 1.4e-19 100.5 69 68.1
AT1G10320 Arabidopsis thaliana HOM05D000904 ORTHO05D006931 1.4e-19 100.5 166 51.8
A08p34030 Brassica napus HOM05D000904 ORTHO05D006931 2.3e-19 99.8 121 60.3
AUR62043443 Chenopodium quinoa HOM05D000904 ORTHO05D006931 3.9e-19 99.0 170 42.9
BcaNung05166 Brassica carinata HOM05D000904 ORTHO05D006931 6.7e-19 98.2 155 51.6
C08p13580 Brassica napus HOM05D000904 ORTHO05D006931 6.7e-19 98.2 155 51.6
Eucgr.G00080 Eucalyptus grandis HOM05D000904 ORTHO05D006931 6.7e-19 98.2 66 72.7
Nn5g27250 Nelumbo nucifera HOM05D000904 ORTHO05D006931 6.7e-19 98.2 77 67.5
Ciclev10024033m.g Citrus clementina HOM05D000904 ORTHO05D006931 1.1e-18 97.4 67 71.6
Migut.B00725 Erythranthe guttata HOM05D000904 ORTHO05D006931 2.6e-18 96.3 113 61.1
Lsat_1_v5_gn_9_121820 Lactuca sativa HOM05D000904 ORTHO05D006931 4.4e-18 95.5 65 67.7
Lj5A282T77 Lonicera japonica HOM05D000904 ORTHO05D006931 7.4e-18 94.7 61 73.8
Nitab4.5_0004668g0060 Nicotiana tabacum HOM05D000904 ORTHO05D006931 1.3e-17 94.0 72 66.7
Nitab4.5_0008306g0010 Nicotiana tabacum HOM05D000904 ORTHO05D006931 1.3e-17 94.0 72 66.7
Oeu043612.1 Olea europaea HOM05D000904 ORTHO05D006931 1.7e-17 93.6 172 59.3
SGA_v2.0_scaffold131G34405 Striga asiatica HOM05D000904 ORTHO05D006931 2.2e-17 93.2 72 61.1
GSVIVG01023150001 Vitis vinifera HOM05D000904 ORTHO05D006931 2.2e-17 93.2 114 60.5
DCAR_001720 Daucus carota HOM05D000904 ORTHO05D006931 4.8e-17 92.0 176 52.8
Peaxi162Scf00011g01832 Petunia axillaris HOM05D000904 ORTHO05D006931 6.3e-17 91.7 84 60.7
Cpa.g.sc173.41 Carica papaya HOM05D000904 ORTHO05D006931 2.4e-16 89.7 202 45.5
HPP92_011425 Vanilla planifolia HOM05D000904 ORTHO05D006931 2.4e-16 89.7 174 43.7
HPP92_011434 Vanilla planifolia HOM05D000904 ORTHO05D006931 2.4e-16 89.7 174 43.7
BraA08t35316Z Brassica rapa HOM05D000904 ORTHO05D005281 4.1e-16 89.0 138 52.9
CAN.G855.47 Capsicum annuum HOM05D000904 ORTHO05D006931 4.1e-16 89.0 72 62.5
unitig_578.g15961 Utricularia gibba HOM05D000904 ORTHO05D006931 4.1e-16 89.0 174 46.6
Zm00001eb243910 Zea mays HOM05D000904 ORTHO05D006931 4.1e-16 89.0 146 45.9
ATR1089G094 Amborella trichopoda HOM05D000904 ORTHO05D006931 6.9e-16 88.2 64 62.5
Carub.0001s0974 Capsella rubella HOM05D000904 ORTHO05D006931 9.1e-16 87.8 119 58.0
AUR62021311 Chenopodium quinoa HOM05D000904 ORTHO05D006931 1.2e-15 87.4 170 44.1
PGSC0003DMG400020705 Solanum tuberosum HOM05D000904 ORTHO05D006931 1.2e-15 87.4 72 62.5
vmacro19831 Vaccinium macrocarpon HOM05D000904 ORTHO05D006931 1.2e-15 87.4 70 64.3
Sopen01g045510 Solanum pennellii HOM05D000904 ORTHO05D006931 2.0e-15 86.7 65 63.1
Sc06g0007800 Simmondsia chinensis HOM05D000904 ORTHO05D006931 2.6e-15 86.3 75 58.7
AL1G21050 Arabidopsis lyrata HOM05D000904 ORTHO05D006931 3.4e-15 85.9 172 55.2
Hund00892 Selenicereus undatus HOM05D000904 ORTHO05D006931 4.5e-15 85.5 75 58.7
BcaNung05168 Brassica carinata HOM05D000904 ORTHO05D006931 1.0e-14 84.3 177 49.7
MBI19_g32709_MAGBIO Magnolia biondii HOM05D000904 ORTHO05D006931 1.0e-14 84.3 183 47.0
Solyc01g103090.4 Solanum lycopersicum HOM05D000904 ORTHO05D006931 1.0e-14 84.3 64 62.5
arahy.Tifrunner.gnm1.ann1.AE80VE Arachis hypogaea HOM05D000904 ORTHO05D006931 1.7e-14 83.6 160 46.2
BolC8t48998H Brassica oleracea HOM05D000904 ORTHO05D005281 2.9e-14 82.8 197 50.3
HanXRQChr12g0381671 Helianthus annuus HOM05D000904 ORTHO05D006931 2.9e-14 82.8 176 47.2
BcaNung05228 Brassica carinata HOM05D000904 ORTHO05D006931 8.5e-14 81.3 110 57.3
ECA240G4044 Erigeron canadensis HOM05D000904 ORTHO05D006931 1.1e-13 80.9 177 42.4
arahy.Tifrunner.gnm1.ann1.V0D4VX Arachis hypogaea HOM05D000904 ORTHO05D006931 2.5e-13 79.7 181 47.5
Sp1g08920 Schrenkiella parvula HOM05D000904 ORTHO05D006931 3.2e-13 79.3 119 54.6
arahy.Tifrunner.gnm1.ann1.7BJ6UQ Arachis hypogaea HOM05D000904 ORTHO05D006931 5.5e-13 78.6 119 52.1
Pp3c3_25240 Physcomitrium patens HOM05D000904 ORTHO05D006931 5.5e-13 78.6 77 55.8
Aqoxy6G00043 Aquilegia oxysepala HOM05D000904 ORTHO05D006931 9.4e-13 77.8 78 55.1
PSO063G1559 Papaver somniferum HOM05D000904 ORTHO05D006931 1.2e-12 77.4 57 64.9
PSO421G0485 Papaver somniferum HOM05D000904 ORTHO05D006931 1.2e-12 77.4 57 64.9
AagrBONN_evm.TU.Sc2ySwM_228.1260 Anthoceros agrestis HOM05D000904 ORTHO05D006931 2.3e-11 73.2 170 35.9
CSS0030434 Camellia sinensis var. sinensis HOM05D000904 ORTHO05D006931 3.0e-11 72.8 115 52.2
Thhalv10009354m.g Eutrema salsugineum HOM05D000904 ORTHO05D006931 1.5e-10 70.5 128 52.3
RcHm_v2.0_Chr6g0289941 Rosa chinensis HOM05D000904 ORTHO05D006931 1.5e-10 70.5 144 39.6
FAN08G0588 Fragaria x ananassa HOM05D000904 ORTHO05D006931 7.4e-10 68.2 157 35.7
ECA233G0393 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-09 67.4 76 48.7
AUR62033228 Chenopodium quinoa HOM05D000904 ORTHO05D006931 1.6e-07 60.5 55 61.8
Lj5g0025119 Lotus japonicus HOM05D000904 ORTHO05D006931 2.6e-07 59.7 168 43.5
CDE05G0469 Ceratophyllum demersum HOM05D000904 ORTHO05D006931 4.5e-07 58.9 67 47.8
VMungo0540G1910 Vigna mungo HOM05D000904 ORTHO05D006931 1.7e-06 57.0 63 52.4
Mapoly0079s0042 Marchantia polymorpha HOM05D000904 ORTHO05D006931 2.2e-06 56.6 166 42.2


User provided reference genes

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