Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv44237 Davidia involucrata HOM05D006139 ORTHO05D007681 1.3e-296 1022.3 510 100.0
Hma1.2p1_0412F.1_g147150 Hydrangea macrophylla HOM05D006139 ORTHO05D007681 4.0e-258 894.4 494 89.1
CSS0045945 Camellia sinensis var. sinensis HOM05D006139 ORTHO05D007681 1.1e-252 876.3 494 86.0
TAR365G1167 Trochodendron aralioides HOM05D006139 ORTHO05D007681 3.5e-246 854.7 494 84.4
Potri.011G107400 Populus trichocarpa HOM05D006139 ORTHO05D007681 2.3e-245 852.0 494 83.8
GSVIVG01031668001 Vitis vinifera HOM05D006139 ORTHO05D007681 3.3e-236 821.6 494 83.0
Cc03_g10570 Coffea canephora HOM05D006139 ORTHO05D007681 9.6e-236 820.1 494 80.4
Sabra11G0095200 Salix brachista HOM05D006139 ORTHO05D007681 9.6e-236 820.1 502 81.1
QL10p044141 Quercus lobata HOM05D006139 ORTHO05D007681 1.3e-235 819.7 528 76.3
Manes.03G099000 Manihot esculenta HOM05D006139 ORTHO05D007681 4.8e-235 817.8 494 81.0
Sopen09g036170 Solanum pennellii HOM05D006139 ORTHO05D007681 1.4e-234 816.2 494 80.8
Rhsim07G0086500 Rhododendron simsii HOM05D006139 ORTHO05D007681 6.9e-234 813.9 572 73.1
Ciclev10019318m.g Citrus clementina HOM05D006139 ORTHO05D007681 1.5e-233 812.8 494 81.2
Solyc09g098230.3 Solanum lycopersicum HOM05D006139 ORTHO05D007681 2.6e-233 812.0 494 80.6
ECA246G3778 Erigeron canadensis HOM05D006139 ORTHO05D007681 7.6e-233 810.4 495 79.8
Prupe.1G178000 Prunus persica HOM05D006139 ORTHO05D007681 9.9e-233 810.1 494 80.0
Lsat_1_v5_gn_3_24941 Lactuca sativa HOM05D006139 ORTHO05D007681 8.4e-232 807.0 494 78.7
Eucgr.F03241 Eucalyptus grandis HOM05D006139 ORTHO05D007681 1.9e-231 805.8 494 80.2
TWI38G2388 Tripterygium wilfordii HOM05D006139 ORTHO05D007681 3.2e-231 805.1 493 79.1
Aqoxy2G03950 Aquilegia oxysepala HOM05D006139 ORTHO05D007681 1.0e-229 800.0 494 78.7
Sc22g0003230 Simmondsia chinensis HOM05D006139 ORTHO05D007681 6.7e-229 797.3 493 80.1
Sed0017452 Sechium edule HOM05D006139 ORTHO05D007681 2.8e-227 792.0 494 77.3
MD13G1278700 Malus domestica HOM05D006139 ORTHO05D007681 1.1e-226 790.0 494 78.3
MELO3C017678.2 Cucumis melo HOM05D006139 ORTHO05D007681 5.3e-226 787.7 494 77.5
Duzib213G0841 Durio zibethinus HOM05D006139 ORTHO05D007681 6.9e-226 787.3 494 76.7
SGA_v2.0_scaffold109G31142 Striga asiatica HOM05D006139 ORTHO05D007681 6.9e-226 787.3 497 77.3
Thecc.07G123700 Theobroma cacao HOM05D006139 ORTHO05D007681 1.2e-225 786.6 494 76.7
CiPaw.01G108300 Carya illinoinensis HOM05D006139 ORTHO05D007681 1.5e-225 786.2 494 78.1
MSTRG.17865 Avicennia marina HOM05D006139 ORTHO05D007681 2.0e-225 785.8 494 78.9
CANSAT11G1108 Cannabis sativa HOM05D006139 ORTHO05D007681 2.6e-225 785.4 494 78.3
PSO017G2886 Papaver somniferum HOM05D006139 ORTHO05D007681 2.6e-225 785.4 494 76.5
PSO675G6876 Papaver somniferum HOM05D006139 ORTHO05D007681 5.8e-225 784.3 494 76.7
Gohir.A01G052100 Gossypium hirsutum HOM05D006139 ORTHO05D007681 7.6e-225 783.9 494 77.3
Migut.N00440 Erythranthe guttata HOM05D006139 ORTHO05D007681 1.3e-224 783.1 494 78.5
RcHm_v2.0_Chr4g0409801 Rosa chinensis HOM05D006139 ORTHO05D007681 2.9e-224 781.9 494 78.1
Gohir.D01G041500 Gossypium hirsutum HOM05D006139 ORTHO05D007681 6.4e-224 780.8 494 77.3
CsaV3_4G003770 Cucumis sativus L. HOM05D006139 ORTHO05D007681 8.4e-224 780.4 494 76.7
Gorai.002G052100 Gossypium raimondii HOM05D006139 ORTHO05D007681 5.5e-223 777.7 494 76.7
FvH4_4g12150 Fragaria vesca HOM05D006139 ORTHO05D007681 6.9e-218 760.8 494 76.1
FAN12G2778 Fragaria x ananassa HOM05D006139 ORTHO05D007681 2.0e-217 759.2 494 75.9
Nn3g20967 Nelumbo nucifera HOM05D006139 ORTHO05D007681 1.7e-216 756.1 475 77.1
BcaC05g25552 Brassica carinata HOM05D006139 ORTHO05D007681 2.7e-214 748.8 494 72.7
Sp1g15110 Schrenkiella parvula HOM05D006139 ORTHO05D007681 3.5e-214 748.4 494 72.7
C05p15280 Brassica napus HOM05D006139 ORTHO05D007681 6.0e-214 747.7 494 72.7
CAN.G710.40 Capsicum annuum HOM05D006139 ORTHO05D007681 3.0e-213 745.3 500 74.8
Thhalv10007085m.g Eutrema salsugineum HOM05D006139 ORTHO05D007681 3.9e-213 745.0 494 72.3
Carub.0001s1670 Capsella rubella HOM05D006139 ORTHO05D007681 1.1e-212 743.4 495 71.9
AT1G16970 Arabidopsis thaliana HOM05D006139 ORTHO05D007681 1.5e-212 743.0 495 72.3
Lalb_Chr06g0164661 Lupinus albus HOM05D006139 ORTHO05D007681 1.6e-211 739.6 496 71.8
BcaB02g06659 Brassica carinata HOM05D006139 ORTHO05D007681 3.7e-211 738.4 494 71.7
A06p12870 Brassica napus HOM05D006139 ORTHO05D007681 4.8e-211 738.0 494 71.5
arahy.Tifrunner.gnm1.ann1.46LBLY Arachis hypogaea HOM05D006139 ORTHO05D007681 1.5e-209 733.0 495 71.7
Glyma.20G248800 Glycine max HOM05D006139 ORTHO05D007681 1.5e-209 733.0 501 72.5
THA.LOC104812308 Tarenaya hassleriana HOM05D006139 ORTHO05D007681 5.9e-209 731.1 494 71.7
PGR031G2404 Punica granatum HOM05D006139 ORTHO05D007681 5.5e-207 724.5 495 71.1
CARHR017480 Cardamine hirsuta HOM05D006139 ORTHO05D007681 6.1e-206 721.1 495 70.3
Hund19684 Selenicereus undatus HOM05D006139 ORTHO05D007681 7.4e-204 714.1 494 73.1
Psat6g243280 Pisum sativum HOM05D006139 ORTHO05D007681 1.2e-201 706.8 495 69.1
VMungo0720G1636 Vigna mungo HOM05D006139 ORTHO05D007681 1.3e-200 703.4 496 70.0
BolC5t30234H Brassica oleracea HOM05D006139 ORTHO05D007681 5.0e-200 701.4 497 69.0
Lj5g0023092 Lotus japonicus HOM05D006139 ORTHO05D007681 5.0e-200 701.4 493 69.4
Medtr1g116980 Medicago truncatula HOM05D006139 ORTHO05D007681 7.2e-199 697.6 492 68.5
Zm00001eb116810 Zea mays HOM05D006139 ORTHO05D007681 9.4e-199 697.2 494 67.8
BraA06t24447Z Brassica rapa HOM05D006139 ORTHO05D007681 7.9e-198 694.1 494 68.4
Phvul.007G001600 Phaseolus vulgaris HOM05D006139 ORTHO05D007681 3.1e-194 682.2 495 68.5
AUR62018029 Chenopodium quinoa HOM05D006139 ORTHO05D007681 2.6e-193 679.1 500 67.0
FAN07G2792 Fragaria x ananassa HOM05D006139 ORTHO05D007681 5.0e-192 674.9 505 68.5
Oeu013397.2 Olea europaea HOM05D006139 ORTHO05D007681 5.0e-192 674.9 427 78.9
FAN12G0395 Fragaria x ananassa HOM05D006139 ORTHO05D007681 1.9e-191 672.9 506 68.6
FAN17G0552 Fragaria x ananassa HOM05D006139 ORTHO05D007681 2.5e-191 672.5 494 69.4
ATR0609G005 Amborella trichopoda HOM05D006139 ORTHO05D007681 7.9e-190 667.5 494 65.8
Lj4A728T41 Lonicera japonica HOM05D006139 ORTHO05D007681 3.0e-189 665.6 452 75.9
COL.COLO4_17513 Corchorus olitorius HOM05D006139 ORTHO05D007681 1.9e-183 646.4 513 65.1
vmacro13984 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 2.3e-181 639.4 605 59.2
arahy.Tifrunner.gnm1.ann1.JAL8JD Arachis hypogaea HOM05D006139 ORTHO05D007681 4.4e-180 635.2 505 64.6
AUR62003718 Chenopodium quinoa HOM05D006139 ORTHO05D007681 1.4e-178 630.2 477 66.2
Nitab4.5_0001687g0050 Nicotiana tabacum HOM05D006139 ORTHO05D007681 1.1e-175 620.5 494 64.8
Haze_11079 Corylus avellana HOM05D006139 ORTHO05D007681 2.4e-170 602.8 494 64.2
MBI07_g00628_MAGBIO Magnolia biondii HOM05D006139 ORTHO05D007681 1.2e-169 600.5 494 62.8
Nitab4.5_0001526g0130 Nicotiana tabacum HOM05D006139 ORTHO05D007681 4.9e-155 552.0 510 58.6
Peaxi162Scf00286g00443 Petunia axillaris HOM05D006139 ORTHO05D007681 6.0e-153 545.0 494 61.1
ClCG07G016640 Citrullus lanatus HOM05D006139 ORTHO05D007681 6.6e-144 515.0 495 57.8
Mapoly0113s0020 Marchantia polymorpha HOM05D006139 ORTHO05D007681 4.4e-132 475.7 489 49.1
SMO361G0769 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 1.5e-127 460.7 431 53.1
SMO361G0513 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 4.3e-127 459.1 431 52.9
SHI27652 Sapria himalayana HOM05D006139 ORTHO05D007681 3.4e-124 449.5 358 64.2
Atru.chr2.2052 Acer truncatum HOM05D006139 ORTHO05D007681 3.8e-123 446.0 271 81.2
HPP92_015930 Vanilla planifolia HOM05D006139 ORTHO05D007681 6.4e-115 418.7 304 67.4
TPR.G8868 Trifolium pratense HOM05D006139 ORTHO05D007681 2.4e-114 416.8 285 70.2
Cpa.g.sc77.50 Carica papaya HOM05D006139 ORTHO05D007681 5.1e-112 409.1 446 52.2
Pp3c18_7140 Physcomitrium patens HOM05D006139 ORTHO05D007681 6.2e-110 402.1 488 44.5
AagrBONN_evm.TU.Sc2ySwM_228.1556 Anthoceros agrestis HOM05D006139 ORTHO05D007681 1.4e-109 401.0 499 43.7
CBR_g19434 Chara braunii HOM05D006139 ORTHO05D007681 9.0e-109 398.3 490 43.7
CDE02G2779 Ceratophyllum demersum HOM05D006139 ORTHO05D007681 4.8e-102 375.9 304 64.1
Aa31LG7G1410 Aethionema arabicum HOM05D006139 ORTHO05D007681 1.4e-98 364.4 494 44.7
Ca_11423_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 3.4e-92 343.2 244 69.7
DCAR_005495 Daucus carota HOM05D006139 ORTHO05D007681 8.5e-91 338.6 245 70.6
SEGI_35314 Sequoiadendron giganteum HOM05D006139 ORTHO05D007681 9.4e-90 335.1 247 66.4
Atru.chr2.2053 Acer truncatum HOM05D006139 ORTHO05D007681 5.3e-77 292.7 174 82.8
unitig_578.g15953 Utricularia gibba HOM05D006139 ORTHO05D007681 4.5e-76 289.7 249 59.4
PGSC0003DMG400014069 Solanum tuberosum HOM05D006139 ORTHO05D007681 5.5e-74 282.7 157 86.0
Os07g0184900 Oryza sativa ssp. japonica HOM05D006139 ORTHO05D007681 1.7e-59 234.6 156 69.9
TPR.G8879 Trifolium pratense HOM05D006139 ORTHO05D007681 8.5e-59 232.3 161 67.1
Hund20183 Selenicereus undatus HOM05D006139 ORTHO05D007681 2.0e-52 211.1 189 63.0
Cre13.g607500 Chlamydomonas reinhardtii HOM05D006139 ORTHO05D007681 6.1e-41 172.9 546 28.0
DCAR_005496 Daucus carota HOM05D006139 ORTHO05D007681 1.3e-38 165.2 97 79.4
Ca_11424_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 5.6e-34 149.8 106 67.0
Cfa021664 Carpinus fangiana HOM05D006139 ORTHO05D007681 6.8e-32 142.9 442 26.2
AUR62043732 Chenopodium quinoa HOM05D006139 ORTHO05D007681 7.5e-31 139.4 92 69.6
TPR.G8907 Trifolium pratense HOM05D006139 ORTHO05D007681 5.4e-29 133.3 93 65.6
Ah.03g143010 Amaranthus hybridus HOM05D006139 ORTHO05D007681 4.0e-24 117.1 128 50.8
FAN22G0061 Fragaria x ananassa HOM05D006139 ORTHO05D007681 2.4e-21 107.8 82 68.3
SEGI_31905 Sequoiadendron giganteum HOM05D006139 ORTHO05D007681 2.4e-21 107.8 74 62.2
HanXRQChr13g0406711 Helianthus annuus HOM05D006139 ORTHO05D007681 2.5e-18 97.8 57 78.9
MCO14G338 Micromonas commoda HOM05D006139 ORTHO05D007681 7.3e-18 96.3 565 23.0
CARHR154100 Cardamine hirsuta HOM05D006139 ORTHO05D007681 9.5e-18 95.9 66 68.2
Zm00001eb114470 Zea mays HOM05D006139 ORTHO05D007681 1.2e-17 95.5 69 69.6
vmacro12608 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 4.4e-15 87.0 65 69.2
SEGI_11325 Sequoiadendron giganteum HOM05D006139 ORTHO05D007681 1.1e-13 82.4 69 55.1
Eucgr.L02132 Eucalyptus grandis HOM05D006139 ORTHO05D007681 7.1e-13 79.7 47 80.9
Ah.03g143030 Amaranthus hybridus HOM05D006139 ORTHO05D007681 6.9e-08 63.2 40 67.5
unitig_578.g15954 Utricularia gibba HOM05D006139 ORTHO05D004041 4.4e-07 60.5 35 77.1


User provided reference genes

Program Settings