Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv35240 Davidia involucrata HOM05D001410 ORTHO05D184056 1.2e-83 313.2 159 100.0
DCAR_009384 Daucus carota HOM05D001410 ORTHO05D006840 4.3e-25 118.6 160 48.1
Dinv28396 Davidia involucrata HOM05D001410 ORTHO05D006840 5.6e-25 118.2 161 49.1
Atru.chr1.387 Acer truncatum HOM05D001410 ORTHO05D006840 7.3e-25 117.9 160 48.1
Hma1.2p1_0327F.1_g126300 Hydrangea macrophylla HOM05D001410 ORTHO05D006840 9.6e-25 117.5 160 50.0
Hma1.2p1_0327F.1_g126310 Hydrangea macrophylla HOM05D001410 ORTHO05D006840 9.6e-25 117.5 160 50.0
TAR636G1793 Trochodendron aralioides HOM05D001410 ORTHO05D006840 2.1e-24 116.3 160 48.1
Oeu033106.1 Olea europaea HOM05D001410 ORTHO05D006840 2.8e-24 115.9 161 47.8
Atru.chr1.370 Acer truncatum HOM05D001410 ORTHO05D006840 3.6e-24 115.5 160 47.5
Atru.ctg97_1.1 Acer truncatum HOM05D001410 ORTHO05D006840 3.6e-24 115.5 160 47.5
Nn1g01600 Nelumbo nucifera HOM05D001410 ORTHO05D006840 6.2e-24 114.8 161 47.2
COL.COLO4_36928 Corchorus olitorius HOM05D001410 ORTHO05D006840 8.1e-24 114.4 159 47.8
GSVIVG01028877001 Vitis vinifera HOM05D001410 ORTHO05D006840 8.1e-24 114.4 160 48.1
Actinidia03133 Actinidia chinensis HOM05D001410 ORTHO05D006840 1.4e-23 113.6 161 46.6
Duzib084G0352 Durio zibethinus HOM05D001410 ORTHO05D006840 1.4e-23 113.6 160 46.9
TPR.G26044 Trifolium pratense HOM05D001410 ORTHO05D006840 1.4e-23 113.6 161 47.2
Thecc.03G182500 Theobroma cacao HOM05D001410 ORTHO05D006840 1.8e-23 113.2 160 46.9
Actinidia34148 Actinidia chinensis HOM05D001410 ORTHO05D007753 2.4e-23 112.8 160 45.6
Cfa016279 Carpinus fangiana HOM05D001410 ORTHO05D006840 2.4e-23 112.8 155 47.1
Haze_00033 Corylus avellana HOM05D001410 ORTHO05D006840 2.4e-23 112.8 155 47.1
Cpa.g.sc107.96 Carica papaya HOM05D001410 ORTHO05D006840 3.1e-23 112.5 160 46.9
Oeu045369.1 Olea europaea HOM05D001410 ORTHO05D006840 3.1e-23 112.5 161 46.0
Psat5g045320 Pisum sativum HOM05D001410 ORTHO05D006840 3.1e-23 112.5 160 46.9
SGA_v2.0_scaffold10G05300 Striga asiatica HOM05D001410 ORTHO05D006840 4.0e-23 112.1 161 46.0
CSS0001759 Camellia sinensis var. sinensis HOM05D001410 ORTHO05D006840 5.2e-23 111.7 154 46.8
ECA238G2766 Erigeron canadensis HOM05D001410 ORTHO05D006840 6.8e-23 111.3 160 45.6
Medtr3g100910 Medicago truncatula HOM05D001410 ORTHO05D006840 6.8e-23 111.3 161 46.0
Potri.017G142500 Populus trichocarpa HOM05D001410 ORTHO05D006840 6.8e-23 111.3 161 46.0
Phvul.004G109800 Phaseolus vulgaris HOM05D001410 ORTHO05D006840 8.9e-23 110.9 155 45.2
arahy.Tifrunner.gnm1.ann1.18GXDP Arachis hypogaea HOM05D001410 ORTHO05D006840 1.2e-22 110.5 155 47.7
CiPaw.05G263200 Carya illinoinensis HOM05D001410 ORTHO05D006840 1.2e-22 110.5 155 46.5
FvH4_5g00340 Fragaria vesca HOM05D001410 ORTHO05D006840 1.2e-22 110.5 161 46.0
FAN04G1960 Fragaria x ananassa HOM05D001410 ORTHO05D006840 1.2e-22 110.5 161 46.0
FAN08G3530 Fragaria x ananassa HOM05D001410 ORTHO05D006840 1.2e-22 110.5 161 46.0
FAN13G2235 Fragaria x ananassa HOM05D001410 ORTHO05D006840 1.2e-22 110.5 161 46.0
Gohir.A12G255700 Gossypium hirsutum HOM05D001410 ORTHO05D006840 1.2e-22 110.5 157 47.1
SalBow2G1075 Salvia bowleyana HOM05D001410 ORTHO05D006840 1.2e-22 110.5 160 45.0
vmacro09819 Vaccinium macrocarpon HOM05D001410 ORTHO05D006840 1.2e-22 110.5 160 46.2
Gorai.008G275300 Gossypium raimondii HOM05D001410 ORTHO05D006840 1.5e-22 110.2 154 48.1
SalBow2G2133 Salvia bowleyana HOM05D001410 ORTHO05D006840 1.5e-22 110.2 160 45.0
THA.LOC104811964 Tarenaya hassleriana HOM05D001410 ORTHO05D006840 1.5e-22 110.2 161 44.1
DCAR_014517 Daucus carota HOM05D001410 ORTHO05D006840 2.0e-22 109.8 161 43.5
Glyma.16G179800 Glycine max HOM05D001410 ORTHO05D006840 2.0e-22 109.8 155 47.1
arahy.Tifrunner.gnm1.ann1.BA6YY5 Arachis hypogaea HOM05D001410 ORTHO05D006840 2.6e-22 109.4 155 47.1
Ca_15983_v3 Cicer arietinum L. HOM05D001410 ORTHO05D006840 2.6e-22 109.4 161 45.3
A02p11770 Brassica napus HOM05D001410 ORTHO05D006840 3.4e-22 109.0 160 45.6
BraA02t06242Z Brassica rapa HOM05D001410 ORTHO05D006840 3.4e-22 109.0 160 45.6
Cc02_g02500 Coffea canephora HOM05D001410 ORTHO05D006840 3.4e-22 109.0 161 44.7
Prupe.5G076000 Prunus persica HOM05D001410 ORTHO05D006840 3.4e-22 109.0 158 46.8
C09p41940 Brassica napus HOM05D001410 ORTHO05D006840 4.4e-22 108.6 160 45.6
BolC9t57078H Brassica oleracea HOM05D001410 ORTHO05D006840 4.4e-22 108.6 160 45.6
Ciclev10004659m.g Citrus clementina HOM05D001410 ORTHO05D006840 4.4e-22 108.6 161 44.1
MBI04_g30786_MAGBIO Magnolia biondii HOM05D001410 ORTHO05D006840 4.4e-22 108.6 160 45.0
RcHm_v2.0_Chr7g0202211 Rosa chinensis HOM05D001410 ORTHO05D006840 4.4e-22 108.6 161 45.3
MELO3C019492.2 Cucumis melo HOM05D001410 ORTHO05D006840 5.8e-22 108.2 161 46.0
CsaV3_3G018830 Cucumis sativus L. HOM05D001410 ORTHO05D006840 5.8e-22 108.2 161 46.0
Aqoxy7G00253 Aquilegia oxysepala HOM05D001410 ORTHO05D006840 7.6e-22 107.8 154 44.8
Glyma.09G133200 Glycine max HOM05D001410 ORTHO05D006840 7.6e-22 107.8 155 47.1
Lj2g0023395 Lotus japonicus HOM05D001410 ORTHO05D006840 7.6e-22 107.8 160 44.4
MBI04_g21149_MAGBIO Magnolia biondii HOM05D001410 ORTHO05D006840 7.6e-22 107.8 160 45.0
Migut.F01092 Erythranthe guttata HOM05D001410 ORTHO05D006840 9.9e-22 107.5 160 43.8
Nitab4.5_0005056g0110 Nicotiana tabacum HOM05D001410 ORTHO05D006840 9.9e-22 107.5 161 44.1
BcaB05g21963 Brassica carinata HOM05D001410 ORTHO05D006840 1.3e-21 107.1 161 44.7
BcaC03g14524 Brassica carinata HOM05D001410 ORTHO05D006840 1.3e-21 107.1 161 44.7
BcaNung07179 Brassica carinata HOM05D001410 ORTHO05D006840 1.3e-21 107.1 161 44.7
Lj1C1004T3 Lonicera japonica HOM05D001410 ORTHO05D006840 1.3e-21 107.1 161 44.7
HanXRQChr04g0120461 Helianthus annuus HOM05D001410 ORTHO05D006840 1.7e-21 106.7 160 43.8
HanXRQChr07g0206941 Helianthus annuus HOM05D001410 ORTHO05D006840 1.7e-21 106.7 160 43.8
Sc09g0007270 Simmondsia chinensis HOM05D001410 ORTHO05D006840 1.7e-21 106.7 160 43.1
Ah.16g106580 Amaranthus hybridus HOM05D001410 ORTHO05D006840 2.2e-21 106.3 159 44.0
BcaC04g20579 Brassica carinata HOM05D001410 ORTHO05D006840 2.2e-21 106.3 154 44.8
Duzib068G1356 Durio zibethinus HOM05D001410 ORTHO05D006840 2.2e-21 106.3 160 43.8
Lalb_Chr02g0141201 Lupinus albus HOM05D001410 ORTHO05D006840 2.2e-21 106.3 161 44.7
QL09p013112 Quercus lobata HOM05D001410 ORTHO05D006840 2.2e-21 106.3 160 44.4
Sed0018120 Sechium edule HOM05D001410 ORTHO05D006840 2.2e-21 106.3 161 44.1
BcaB08g35606 Brassica carinata HOM05D001410 ORTHO05D006840 2.9e-21 105.9 161 44.7
PGR042G0190 Punica granatum HOM05D001410 ORTHO05D006840 2.9e-21 105.9 161 45.3
Aa31LG3G8870 Aethionema arabicum HOM05D001410 ORTHO05D006840 3.8e-21 105.5 155 45.2
ClCG05G008280 Citrullus lanatus HOM05D001410 ORTHO05D006840 3.8e-21 105.5 161 45.3
Sp6g14710 Schrenkiella parvula HOM05D001410 ORTHO05D006840 3.8e-21 105.5 161 44.7
AagrBONN_evm.TU.Sc2ySwM_228.2217 Anthoceros agrestis HOM05D001410 ORTHO05D006840 4.9e-21 105.1 154 44.2
Nitab4.5_0001611g0080 Nicotiana tabacum HOM05D001410 ORTHO05D006840 4.9e-21 105.1 161 43.5
PSO541G3847 Papaver somniferum HOM05D001410 ORTHO05D006840 4.9e-21 105.1 155 45.2
PSO675G7606 Papaver somniferum HOM05D001410 ORTHO05D006840 4.9e-21 105.1 155 45.2
EL10Ac2g03345 Beta vulgaris HOM05D001410 ORTHO05D006840 6.4e-21 104.8 159 42.8
BNapus_Darmor_BZH_scaffold_232p00120 Brassica napus HOM05D001410 ORTHO05D006840 6.4e-21 104.8 161 44.1
BolC2t08096H Brassica oleracea HOM05D001410 ORTHO05D006840 6.4e-21 104.8 161 44.1
CDE11G0932 Ceratophyllum demersum HOM05D001410 ORTHO05D006840 6.4e-21 104.8 160 43.8
AUR62037623 Chenopodium quinoa HOM05D001410 ORTHO05D006840 6.4e-21 104.8 159 42.1
Peaxi162Scf00647g00325 Petunia axillaris HOM05D001410 ORTHO05D006840 6.4e-21 104.8 160 43.1
ATR0661G435 Amborella trichopoda HOM05D001410 ORTHO05D006840 8.4e-21 104.4 160 43.1
Carub.0008s1264 Capsella rubella HOM05D001410 ORTHO05D006840 8.4e-21 104.4 160 43.8
Thhalv10013193m.g Eutrema salsugineum HOM05D001410 ORTHO05D006840 8.4e-21 104.4 161 44.7
BraA10t43089Z Brassica rapa HOM05D001410 ORTHO05D006840 1.1e-20 104.0 161 44.1
Os07g0165000 Oryza sativa ssp. japonica HOM05D001410 ORTHO05D006840 1.1e-20 104.0 154 42.9
AT5G52520 Arabidopsis thaliana HOM05D001410 ORTHO05D006840 1.4e-20 103.6 160 43.8
CARHR265490 Cardamine hirsuta HOM05D001410 ORTHO05D006840 1.4e-20 103.6 160 43.8
TWI14G0872 Tripterygium wilfordii HOM05D001410 ORTHO05D006840 1.4e-20 103.6 161 42.2
Hund12464 Selenicereus undatus HOM05D001410 ORTHO05D006840 2.4e-20 102.8 154 45.5
PGSC0003DMG400027526 Solanum tuberosum HOM05D001410 ORTHO05D006840 2.4e-20 102.8 161 43.5
A10p10070 Brassica napus HOM05D001410 ORTHO05D006840 3.2e-20 102.4 161 43.5
Manes.14G023300 Manihot esculenta HOM05D001410 ORTHO05D006840 3.2e-20 102.4 161 43.5
Solyc01g096870.4 Solanum lycopersicum HOM05D001410 ORTHO05D006840 3.2e-20 102.4 161 42.9
Sopen01g040580 Solanum pennellii HOM05D001410 ORTHO05D006840 3.2e-20 102.4 161 42.9
Zm00001eb300750 Zea mays HOM05D001410 ORTHO05D006840 5.4e-20 101.7 160 41.2
C02p19590 Brassica napus HOM05D001410 ORTHO05D006840 7.1e-20 101.3 161 42.9
Eucgr.A02753 Eucalyptus grandis HOM05D001410 ORTHO05D006840 7.1e-20 101.3 161 42.2
SMO114G0131 Selaginella moellendorffii HOM05D001410 ORTHO05D006840 7.1e-20 101.3 154 43.5
AL8G26980 Arabidopsis lyrata HOM05D001410 ORTHO05D006840 1.2e-19 100.5 160 43.1
Lsat_1_v5_gn_2_131140 Lactuca sativa HOM05D001410 ORTHO05D006840 1.6e-19 100.1 160 41.2
CANSAT21G1393 Cannabis sativa HOM05D001410 ORTHO05D006840 2.1e-19 99.8 161 41.6
TWI39G0800 Tripterygium wilfordii HOM05D001410 ORTHO05D006840 2.7e-19 99.4 161 41.6
arahy.Tifrunner.gnm1.ann1.D8GG75 Arachis hypogaea HOM05D001410 ORTHO05D006840 3.5e-19 99.0 157 42.0
Mapoly0051s0001 Marchantia polymorpha HOM05D001410 ORTHO05D006840 1.3e-18 97.1 151 41.7
CBR_g8325 Chara braunii HOM05D001410 ORTHO05D006840 3.9e-18 95.5 154 44.2
arahy.Tifrunner.gnm1.ann1.KLDP20 Arachis hypogaea HOM05D001410 ORTHO05D006840 5.1e-18 95.1 155 41.3
Sabra17G0119400 Salix brachista HOM05D001410 ORTHO05D006840 5.1e-18 95.1 219 37.9
Pp3c21_580 Physcomitrium patens HOM05D001410 ORTHO05D006840 6.6e-18 94.7 154 39.6
MCO06G048 Micromonas commoda HOM05D001410 ORTHO05D006840 9.6e-17 90.9 153 39.9
Cre09.g406200 Chlamydomonas reinhardtii HOM05D001410 ORTHO05D006840 1.6e-16 90.1 150 39.3
SEGI_03261 Sequoiadendron giganteum HOM05D001410 ORTHO05D006840 8.1e-16 87.8 161 38.5
Hma1.2p1_0227F.1_g096120 Hydrangea macrophylla HOM05D001410 ORTHO05D006840 5.3e-15 85.1 61 70.5
unitig_60.g25549 Utricularia gibba HOM05D001410 ORTHO05D006840 5.3e-15 85.1 44 95.5
VMungo0464G0041 Vigna mungo HOM05D001410 ORTHO05D006840 6.9e-15 84.7 131 41.2
PRCOL_00004237 Prasinoderma coloniale HOM05D001410 ORTHO05D006840 9.0e-15 84.3 153 38.6
AUR62040861 Chenopodium quinoa HOM05D001410 ORTHO05D006840 1.5e-14 83.6 138 39.9
Rhsim09G0200200 Rhododendron simsii HOM05D001410 ORTHO05D006840 2.0e-14 83.2 45 91.1
Prupe.2G299500 Prunus persica HOM05D001410 ORTHO05D006840 1.7e-13 80.1 45 86.7
Gohir.D12G257100 Gossypium hirsutum HOM05D001410 ORTHO05D006840 2.2e-13 79.7 157 38.9
HPP92_028053 Vanilla planifolia HOM05D001410 ORTHO05D006840 8.7e-10 67.8 135 37.8
Potri.004G078866 Populus trichocarpa HOM05D001410 ORTHO05D006840 3.3e-09 65.9 45 71.1
Haze_26683 Corylus avellana HOM05D001410 ORTHO05D003513 4.0e-07 58.9 136 35.3
Actinidia31834 Actinidia chinensis HOM05D001410 ORTHO05D006840 9.0e-07 57.8 42 66.7
Peaxi162Scf00045g00024 Petunia axillaris HOM05D001410 ORTHO05D003969 2.6e-06 56.2 144 30.6
Rhsim02G0055200 Rhododendron simsii HOM05D001410 ORTHO05D003969 2.6e-06 56.2 147 30.6
A04p12210 Brassica napus HOM05D001410 ORTHO05D003969 3.4e-06 55.8 155 30.3
SGA_v2.0_scaffold22G09857 Striga asiatica HOM05D001410 ORTHO05D003969 3.4e-06 55.8 141 29.8
BcaB06g27332 Brassica carinata HOM05D001410 ORTHO05D011023 4.5e-06 55.5 145 33.8
Os12g0443700 Oryza sativa ssp. japonica HOM05D001410 ORTHO05D003969 9.9e-06 54.3 153 28.1


User provided reference genes

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