Gene: Cc02_g02500
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc02_g02500
- Transcript Identifier Cc02_g02500.1
- Gene Type Coding gene
- Location chr2 : 2026950-2032726 : negative
Gene Family Information
- ID HOM05D001410
- #Genes/#Species 445/99
- Phylogenetic origin
- ID ORTHO05D006840
- #Genes/#Species 137/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- UniProtKB Q1CXV1
- UniProtKB B9MWZ9
- UniProtKB E0CUX2
- UniProtKB A7NKX0
- UniProtKB A5UU62
- id GSCOCG00020105001
Descriptions
- Description Proline--tRNA ligase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006433 | IEA | InterPro | prolyl-tRNA aminoacylation | |
| GO:0006418 | IEA | InterPro | tRNA aminoacylation for protein translation | |
| GO:0010109 | ISO | PLAZA Integrative Orthology | regulation of photosynthesis | AT5G52520 |
| GO:0048316 | ISO | PLAZA Integrative Orthology | seed development | AT5G52520 |
| GO:0009553 | ISO | PLAZA Integrative Orthology | embryo sac development | AT5G52520 |
| GO:0048481 | ISO | PLAZA Integrative Orthology | plant ovule development | AT5G52520 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000166 | IEA | InterPro | nucleotide binding | |
| GO:0004827 | IEA | InterPro | proline-tRNA ligase activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0004812 | IEA | InterPro | aminoacyl-tRNA ligase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IEA | InterPro | cytoplasm | |
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT5G52520 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G52520 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT5G52520 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR016061 | Proline-tRNA ligase, class II, C-terminal |
| IPR004499 | Proline-tRNA ligase, class IIa, archaeal-type |
| IPR002314 | Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) |
| IPR002316 | Proline-tRNA ligase, class IIa |
| IPR017449 | Prolyl-tRNA synthetase, class II |
| IPR033721 | Prolyl-tRNA synthetase, catalytic domain |
| IPR004154 | Anticodon-binding |
| IPR036621 | Anticodon-binding domain superfamily |
| Mapman id | Description |
|---|---|
| 17.2.17 | Protein biosynthesis.aminoacyl-tRNA synthetase activities.proline-tRNA ligase |