Gene: Carub.0008s1264

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0008s1264
  • Transcript Identifier Carub.0008s1264.1
  • Gene Type Coding gene
  • Location scaffold_8 : 7364792-7367587 : positive

Gene Family Information

  • ID HOM05D001410
  • #Genes/#Species 445/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0008s1264.v1.1
  • pacid 39250900
  • synonym Carubv10026191m.g

Descriptions

  • Description PTHR11451//PTHR11451:SF6 - TRNA SYNTHETASE-RELATED // SUBFAMILY NOT NAMED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006433
IEA
InterProprolyl-tRNA aminoacylation
GO:0006418
IEA
InterProtRNA aminoacylation for protein translation
GO:0010109
ISO
PLAZA Integrative Orthologyregulation of photosynthesis AT5G52520
GO:0048316
ISO
PLAZA Integrative Orthologyseed development AT5G52520
GO:0009553
ISO
PLAZA Integrative Orthologyembryo sac development AT5G52520
GO:0048481
ISO
PLAZA Integrative Orthologyplant ovule development AT5G52520

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004827
IEA
InterProproline-tRNA ligase activity
GO:0005524
IEA
InterProATP binding
GO:0000166
IEA
InterPronucleotide binding
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
InterProcytoplasm
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT5G52520
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G52520
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT5G52520

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004154 Anticodon-binding
IPR004499 Proline-tRNA ligase, class IIa, archaeal-type
IPR002316 Proline-tRNA ligase, class IIa
IPR033721 Prolyl-tRNA synthetase, catalytic domain
IPR016061 Proline-tRNA ligase, class II, C-terminal
IPR017449 Prolyl-tRNA synthetase, class II
IPR036621 Anticodon-binding domain superfamily
IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)
Mapman id Description
17.2.17 Protein biosynthesis.aminoacyl-tRNA synthetase activities.proline-tRNA ligase