Gene: Sopen01g040580

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g040580
  • Transcript Identifier Sopen01g040580.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 98186942-98192743 : positive

Gene Family Information

  • ID HOM05D001410
  • #Genes/#Species 445/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g040580.1

Descriptions

  • Description OVULE ABORTION 6 (OVA6) | FUNCTIONS IN: proline-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding | INVOLVED IN: regulation of photosynthesis, embryo sac development, seed development, tRNA aminoacylation for protein translation, ovule development | LOCATED IN: mitochondrion, chloroplast, chloroplast stroma | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain , Prolyl-tRNA synthetase, class IIa, prokaryotic-type , Prolyl-tRNA synthetase, class II, C-terminal , Anticodon-binding , Prolyl-tRNA synthetase, class II , Prolyl-tRNA synthetase, class IIa, conserved region , Aminoacyl-tRNA synthetase, class II, conserved domain | BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006433
IEA
InterProprolyl-tRNA aminoacylation
GO:0006418
IEA
InterProtRNA aminoacylation for protein translation
GO:0010109
ISO
PLAZA Integrative Orthologyregulation of photosynthesis AT5G52520
GO:0048316
ISO
PLAZA Integrative Orthologyseed development AT5G52520
GO:0009553
ISO
PLAZA Integrative Orthologyembryo sac development AT5G52520
GO:0048481
ISO
PLAZA Integrative Orthologyplant ovule development AT5G52520

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
InterPronucleotide binding
GO:0004827
IEA
InterProproline-tRNA ligase activity
GO:0005524
IEA
InterProATP binding
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
InterProcytoplasm
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT5G52520
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G52520
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT5G52520

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004154 Anticodon-binding
IPR016061 Proline-tRNA ligase, class II, C-terminal
IPR002316 Proline-tRNA ligase, class IIa
IPR004499 Proline-tRNA ligase, class IIa, archaeal-type
IPR033721 Prolyl-tRNA synthetase, catalytic domain
IPR017449 Prolyl-tRNA synthetase, class II
IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)
IPR036621 Anticodon-binding domain superfamily
Mapman id Description
17.2.17 Protein biosynthesis.aminoacyl-tRNA synthetase activities.proline-tRNA ligase