Gene: ClCG05G008280
General Information
Structural Information
- Species Citrullus lanatus
- Gene Identifier ClCG05G008280
- Transcript Identifier ClCG05G008280.1
- Gene Type Coding gene
- Location CG_Chr05 : 8965408-8969249 : positive
Gene Family Information
- ID HOM05D001410
- #Genes/#Species 445/99
- Phylogenetic origin
- ID ORTHO05D006840
- #Genes/#Species 137/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid ClCG05G008280.1
- name maker-CGscf_0002-augustus-gene-12.483
- name maker-CGscf_0002-augustus-gene-12.483-mRNA-1
Descriptions
- Description Proline--tRNA ligase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006418 | IEA | InterPro | tRNA aminoacylation for protein translation | |
| GO:0006433 | IEA | InterPro | prolyl-tRNA aminoacylation | |
| GO:0010109 | ISO | PLAZA Integrative Orthology | regulation of photosynthesis | AT5G52520 |
| GO:0048316 | ISO | PLAZA Integrative Orthology | seed development | AT5G52520 |
| GO:0009553 | ISO | PLAZA Integrative Orthology | embryo sac development | AT5G52520 |
| GO:0048481 | ISO | PLAZA Integrative Orthology | plant ovule development | AT5G52520 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000166 | IEA | InterPro | nucleotide binding | |
| GO:0004812 | IEA | InterPro | aminoacyl-tRNA ligase activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0004827 | IEA | InterPro | proline-tRNA ligase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IEA | InterPro | cytoplasm | |
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT5G52520 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G52520 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT5G52520 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR002314 | Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) |
| IPR004499 | Proline-tRNA ligase, class IIa, archaeal-type |
| IPR017449 | Prolyl-tRNA synthetase, class II |
| IPR002316 | Proline-tRNA ligase, class IIa |
| IPR016061 | Proline-tRNA ligase, class II, C-terminal |
| IPR004154 | Anticodon-binding |
| IPR033721 | Prolyl-tRNA synthetase, catalytic domain |
| IPR036621 | Anticodon-binding domain superfamily |
| Mapman id | Description |
|---|---|
| 17.2.17 | Protein biosynthesis.aminoacyl-tRNA synthetase activities.proline-tRNA ligase |