Gene: AT5G52520

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G52520
  • Transcript Identifier AT5G52520.1
  • Gene Type Coding gene
  • Location Chr5 : 21311112-21313875 : positive

Gene Family Information

  • ID HOM05D001410
  • #Genes/#Species 445/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G52520.1
  • symbol OVA6
  • Alias PRORS1,PROLYL-TRNA SYNTHETASE 1
  • full_name OVULE ABORTION 6
  • uniprot Q9FYR6

Descriptions

  • Description Class II aaRS and biotin synthetases superfamily protein
  • Computational description OVULE ABORTION 6 (OVA6); FUNCTIONS IN: proline-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: regulation of photosynthesis, embryo sac development, seed development, tRNA aminoacylation for protein translation, ovule development; LOCATED IN: mitochondrion, chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Prolyl-tRNA synthetase, class IIa, prokaryotic-type (InterPro:IPR004499), Prolyl-tRNA synthetase, class II, C-terminal (InterPro:IPR016061), Anticodon-binding (InterPro:IPR004154), Prolyl-tRNA synthetase, class II (InterPro:IPR017449), Prolyl-tRNA synthetase, class IIa, conserved region (InterPro:IPR002316), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: Class II aaRS and biotin synthetases superfamily protein (TAIR:AT3G62120.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006433
IEA
GOA Databaseprolyl-tRNA aminoacylation
GO:0006433
IBA
Gene Ontologyprolyl-tRNA aminoacylation1
GO:0006433
IEA
InterProprolyl-tRNA aminoacylation
GO:0006418
IEA
GOA DatabasetRNA aminoacylation for protein translation
GO:0006418
IEA
InterProtRNA aminoacylation for protein translation
GO:0048481
IMP
Gene Ontologyplant ovule development2
GO:0009553
IMP
Gene Ontologyembryo sac development3
GO:0010109
IMP
Gene Ontologyregulation of photosynthesis3
GO:0048316
IMP
Gene Ontologyseed development3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016874
IEA
GOA Databaseligase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000166
IEA
InterPronucleotide binding
GO:0004812
IEA
GOA Databaseaminoacyl-tRNA ligase activity
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004827
IEA
GOA Databaseproline-tRNA ligase activity
GO:0004827
IDA
IBA
Gene Ontologyproline-tRNA ligase activity1 4
GO:0004827
IEA
InterProproline-tRNA ligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
IEA
GOA Databasemitochondrion
GO:0005739
IDA
IBA
Gene Ontologymitochondrion1 5
GO:0009570
IDA
GOA Databasechloroplast stroma
GO:0009570
HDA
IBA
Gene Ontologychloroplast stroma1 6
GO:0009536
IEA
GOA Databaseplastid
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
IDA, HDA
ISM
Gene Ontologychloroplast5 7
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IBA
Gene Ontologycytoplasm1
GO:0005737
IEA
InterProcytoplasm
GO:0017101
IBA
Gene Ontologyaminoacyl-tRNA synthetase multienzyme complex1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004499 Proline-tRNA ligase, class IIa, archaeal-type
IPR016061 Proline-tRNA ligase, class II, C-terminal
IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)
IPR002316 Proline-tRNA ligase, class IIa
IPR017449 Prolyl-tRNA synthetase, class II
IPR033721 Prolyl-tRNA synthetase, catalytic domain
IPR004154 Anticodon-binding
IPR036621 Anticodon-binding domain superfamily
Mapman id Description
17.2.17 Protein biosynthesis.aminoacyl-tRNA synthetase activities.proline-tRNA ligase