Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv12247 Davidia involucrata HOM05D001072 ORTHO05D006807 6.9e-99 364.0 187 100.0
Duzib168G2177 Durio zibethinus HOM05D001072 ORTHO05D006807 3.6e-79 298.5 175 88.6
CSS0035690 Camellia sinensis var. sinensis HOM05D001072 ORTHO05D006807 3.9e-78 295.0 173 86.7
Thecc.09G359500 Theobroma cacao HOM05D001072 ORTHO05D006807 3.3e-77 292.0 175 86.3
COL.COLO4_11172 Corchorus olitorius HOM05D001072 ORTHO05D006807 1.7e-76 289.7 175 85.1
CANSAT54G0981 Cannabis sativa HOM05D001072 ORTHO05D006807 6.3e-76 287.7 175 84.6
Sc06g0008120 Simmondsia chinensis HOM05D001072 ORTHO05D006807 6.3e-76 287.7 183 78.7
Haze_24430 Corylus avellana HOM05D001072 ORTHO05D006807 1.8e-75 286.2 187 77.5
QL01p025823 Quercus lobata HOM05D001072 ORTHO05D006807 4.1e-75 285.0 175 84.6
vmacro02906 Vaccinium macrocarpon HOM05D001072 ORTHO05D006807 9.1e-75 283.9 181 80.1
Actinidia32600 Actinidia chinensis HOM05D001072 ORTHO05D006807 2.0e-74 282.7 173 83.2
Gorai.003G151000 Gossypium raimondii HOM05D001072 ORTHO05D006807 2.0e-74 282.7 177 83.6
Rhsim13G0062700 Rhododendron simsii HOM05D001072 ORTHO05D006807 2.0e-74 282.7 174 83.3
Gohir.A03G024800 Gossypium hirsutum HOM05D001072 ORTHO05D006807 2.6e-74 282.3 177 83.1
Gohir.D03G143700 Gossypium hirsutum HOM05D001072 ORTHO05D006807 7.7e-74 280.8 177 83.1
Glyma.02G232900 Glycine max HOM05D001072 ORTHO05D006807 1.7e-73 279.6 184 79.3
LjContig00141g0020287 Lotus japonicus HOM05D001072 ORTHO05D006807 1.7e-73 279.6 175 82.9
Prupe.6G045900 Prunus persica HOM05D001072 ORTHO05D006807 2.2e-73 279.3 174 80.5
A03p12250 Brassica napus HOM05D001072 ORTHO05D006807 1.1e-72 276.9 184 75.5
TPR.G25340 Trifolium pratense HOM05D001072 ORTHO05D006807 1.9e-72 276.2 178 80.3
Manes.18G136800 Manihot esculenta HOM05D001072 ORTHO05D006807 3.2e-72 275.4 175 82.9
C03p14380 Brassica napus HOM05D001072 ORTHO05D006807 5.5e-72 274.6 184 75.0
CiPaw.13G067600 Carya illinoinensis HOM05D001072 ORTHO05D006807 5.5e-72 274.6 174 80.5
Thhalv10012416m.g Eutrema salsugineum HOM05D001072 ORTHO05D006807 5.5e-72 274.6 184 75.0
Ciclev10000015m.g Citrus clementina HOM05D001072 ORTHO05D006807 9.4e-72 273.9 175 80.6
Cc01_g15000 Coffea canephora HOM05D001072 ORTHO05D006807 1.6e-71 273.1 173 80.9
Sp6g20090 Schrenkiella parvula HOM05D001072 ORTHO05D006807 1.6e-71 273.1 184 73.9
MD03G1058100 Malus domestica HOM05D001072 ORTHO05D006807 2.7e-71 272.3 174 78.7
AT5G58410 Arabidopsis thaliana HOM05D001072 ORTHO05D006807 3.6e-71 271.9 183 73.8
BcaB01g04524 Brassica carinata HOM05D001072 ORTHO05D006807 3.6e-71 271.9 175 77.7
CARHR272240 Cardamine hirsuta HOM05D001072 ORTHO05D006807 3.6e-71 271.9 184 72.8
Migut.D00839 Erythranthe guttata HOM05D001072 ORTHO05D006807 4.7e-71 271.6 174 79.9
Phvul.008G250900 Phaseolus vulgaris HOM05D001072 ORTHO05D006807 4.7e-71 271.6 176 79.0
Ca_05680_v3 Cicer arietinum L. HOM05D001072 ORTHO05D006807 1.4e-70 270.0 178 78.7
DCAR_018643 Daucus carota HOM05D001072 ORTHO05D006807 1.8e-70 269.6 174 78.7
Nn2g11057 Nelumbo nucifera HOM05D001072 ORTHO05D006807 1.8e-70 269.6 186 73.1
MSTRG.21246 Avicennia marina HOM05D001072 ORTHO05D006807 2.3e-70 269.2 174 77.6
BcaB08g36177 Brassica carinata HOM05D001072 ORTHO05D006807 2.3e-70 269.2 184 72.8
A10p15850 Brassica napus HOM05D001072 ORTHO05D006807 2.3e-70 269.2 184 72.8
PGSC0003DMG401017675 Solanum tuberosum HOM05D001072 ORTHO05D006807 3.0e-70 268.9 173 78.6
BcaC04g19869 Brassica carinata HOM05D001072 ORTHO05D006807 3.9e-70 268.5 184 72.8
C09p50300 Brassica napus HOM05D001072 ORTHO05D006807 3.9e-70 268.5 184 72.8
Psat2g054080 Pisum sativum HOM05D001072 ORTHO05D006807 3.9e-70 268.5 178 78.7
Lalb_Chr04g0251881 Lupinus albus HOM05D001072 ORTHO05D006807 5.1e-70 268.1 180 76.1
THA.LOC104810689 Tarenaya hassleriana HOM05D001072 ORTHO05D006807 5.1e-70 268.1 185 73.0
BraA03t10536Z Brassica rapa HOM05D001072 ORTHO05D006807 6.7e-70 267.7 197 70.6
MELO3C020494.2 Cucumis melo HOM05D001072 ORTHO05D006807 8.8e-70 267.3 183 74.9
CsaV3_1G036730 Cucumis sativus L. HOM05D001072 ORTHO05D006807 8.8e-70 267.3 183 74.9
AL8G34570 Arabidopsis lyrata HOM05D001072 ORTHO05D006807 2.0e-69 266.2 182 73.1
PSO017G5353 Papaver somniferum HOM05D001072 ORTHO05D006807 2.6e-69 265.8 173 76.9
Atru.chr1.2576 Acer truncatum HOM05D001072 ORTHO05D006807 3.3e-69 265.4 176 80.7
BolC3t13881H Brassica oleracea HOM05D001072 ORTHO05D006807 4.4e-69 265.0 197 69.5
Hund08884 Selenicereus undatus HOM05D001072 ORTHO05D006807 9.7e-69 263.8 183 73.2
Solyc09g055260.4 Solanum lycopersicum HOM05D001072 ORTHO05D006807 9.7e-69 263.8 173 77.5
PSO170G6524 Papaver somniferum HOM05D001072 ORTHO05D006807 1.3e-68 263.5 174 77.0
TWI31G1315 Tripterygium wilfordii HOM05D001072 ORTHO05D006807 1.3e-68 263.5 187 74.9
Carub.0008s1900 Capsella rubella HOM05D001072 ORTHO05D006807 1.7e-68 263.1 184 72.3
AUR62028316 Chenopodium quinoa HOM05D001072 ORTHO05D006807 1.7e-68 263.1 183 72.7
Nitab4.5_0000684g0150 Nicotiana tabacum HOM05D001072 ORTHO05D006807 1.7e-68 263.1 168 78.0
Sopen09g017350 Solanum pennellii HOM05D001072 ORTHO05D006807 1.7e-68 263.1 173 77.5
AUR62025311 Chenopodium quinoa HOM05D001072 ORTHO05D006807 2.2e-68 262.7 183 73.2
FvH4_3g39950 Fragaria vesca HOM05D001072 ORTHO05D006807 2.2e-68 262.7 175 77.1
RcHm_v2.0_Chr5g0071961 Rosa chinensis HOM05D001072 ORTHO05D006807 2.2e-68 262.7 174 77.6
BraA10t43640Z Brassica rapa HOM05D001072 ORTHO05D006807 6.3e-68 261.2 197 68.5
FAN25G0381 Fragaria x ananassa HOM05D001072 ORTHO05D006807 6.3e-68 261.2 175 76.6
EL10Ac8g18974 Beta vulgaris HOM05D001072 ORTHO05D006807 8.2e-68 260.8 183 71.0
PGR119G0697 Punica granatum HOM05D001072 ORTHO05D006807 8.2e-68 260.8 176 78.4
Medtr5g074510 Medicago truncatula HOM05D001072 ORTHO05D006807 1.1e-67 260.4 179 77.1
Potri.019G126000 Populus trichocarpa HOM05D001072 ORTHO05D006807 1.8e-67 259.6 177 78.0
BolC9t57885H Brassica oleracea HOM05D001072 ORTHO05D006807 2.4e-67 259.2 197 68.0
Sed0011357 Sechium edule HOM05D001072 ORTHO05D006807 2.4e-67 259.2 185 73.5
HanXRQChr10g0312111 Helianthus annuus HOM05D001072 ORTHO05D006807 4.1e-67 258.5 177 76.8
CDE04G3416 Ceratophyllum demersum HOM05D001072 ORTHO05D006807 1.2e-66 256.9 173 72.8
SGA_v2.0_scaffold20G09297 Striga asiatica HOM05D001072 ORTHO05D006807 1.2e-66 256.9 187 69.5
Cpa.g.sc2.338 Carica papaya HOM05D001072 ORTHO05D006807 1.5e-66 256.5 166 80.1
FAN16G0450 Fragaria x ananassa HOM05D001072 ORTHO05D006807 7.7e-66 254.2 177 74.6
Lsat_1_v5_gn_8_108741 Lactuca sativa HOM05D001072 ORTHO05D006807 7.7e-66 254.2 174 76.4
Aqoxy4G02167 Aquilegia oxysepala HOM05D001072 ORTHO05D006807 1.7e-65 253.1 172 73.8
ECA236G3191 Erigeron canadensis HOM05D001072 ORTHO05D006807 2.2e-65 252.7 175 76.6
ATR0681G329 Amborella trichopoda HOM05D001072 ORTHO05D006807 3.8e-65 251.9 181 70.7
arahy.Tifrunner.gnm1.ann1.QD7CJP Arachis hypogaea HOM05D001072 ORTHO05D006807 1.9e-64 249.6 180 71.1
Sabra19G0124000 Salix brachista HOM05D001072 ORTHO05D006807 4.2e-64 248.4 177 75.1
Sabra19G0130600 Salix brachista HOM05D001072 ORTHO05D006807 4.2e-64 248.4 177 75.1
arahy.Tifrunner.gnm1.ann1.XX59BG Arachis hypogaea HOM05D001072 ORTHO05D006807 7.2e-64 247.7 181 70.2
FAN11G0037 Fragaria x ananassa HOM05D001072 ORTHO05D006807 5.2e-62 241.5 212 64.2
HPP92_011994 Vanilla planifolia HOM05D001072 ORTHO05D006807 1.8e-59 233.0 174 65.5
VMungo0647G0153 Vigna mungo HOM05D001072 ORTHO05D006807 1.8e-59 233.0 267 53.6
HPP92_012011 Vanilla planifolia HOM05D001072 ORTHO05D006807 5.3e-59 231.5 174 64.9
FAN21G1089 Fragaria x ananassa HOM05D001072 ORTHO05D006807 1.9e-56 223.0 264 51.9
SEGI_04376 Sequoiadendron giganteum HOM05D001072 ORTHO05D006807 5.5e-56 221.5 186 58.1
CSS0014731 Camellia sinensis var. sinensis HOM05D001072 ORTHO05D006807 7.2e-56 221.1 154 76.0
ClCG03G000170 Citrullus lanatus HOM05D001072 ORTHO05D006807 4.7e-55 218.4 183 65.0
MBI03_g13045_MAGBIO Magnolia biondii HOM05D001072 ORTHO05D006807 1.0e-54 217.2 137 80.3
Os01g0977600 Oryza sativa ssp. japonica HOM05D001072 ORTHO05D006807 6.8e-54 214.5 190 62.6
Zm00001eb093280 Zea mays HOM05D001072 ORTHO05D006807 3.1e-51 205.7 180 61.1
Nitab4.5_0000046g0010 Nicotiana tabacum HOM05D001072 ORTHO05D006807 4.1e-51 205.3 134 76.9
Oeu050029.1 Olea europaea HOM05D001072 ORTHO05D006807 9.1e-51 204.1 117 82.9
SMO367G0609 Selaginella moellendorffii HOM05D001072 ORTHO05D006807 1.0e-49 200.7 183 55.2
Mapoly0076s0060 Marchantia polymorpha HOM05D001072 ORTHO05D006807 2.7e-47 192.6 187 54.0
AagrBONN_evm.TU.Sc2ySwM_344.918 Anthoceros agrestis HOM05D001072 ORTHO05D006807 1.8e-46 189.9 187 51.9
Pp3c11_1040 Physcomitrium patens HOM05D001072 ORTHO05D006807 1.3e-44 183.7 173 55.5
Psat0s2465g0160 Pisum sativum HOM05D001072 ORTHO05D006807 2.7e-42 176.0 103 81.6
Psat4g121040 Pisum sativum HOM05D001072 ORTHO05D006807 8.6e-41 171.0 103 77.7
unitig_0.g202 Utricularia gibba HOM05D001072 ORTHO05D006807 2.7e-34 149.4 117 64.1
CBR_g30901 Chara braunii HOM05D001072 ORTHO05D006807 1.8e-30 136.7 171 45.0
Lj2A1095G45 Lonicera japonica HOM05D001072 ORTHO05D006807 2.0e-29 133.3 125 56.8
TAR623G0321 Trochodendron aralioides HOM05D001072 ORTHO05D006807 3.7e-28 129.0 173 49.7
TAR623G1063 Trochodendron aralioides HOM05D001072 ORTHO05D006807 3.7e-28 129.0 173 49.7
Ah.09g228980 Amaranthus hybridus HOM05D001072 ORTHO05D006807 1.4e-27 127.1 103 64.1
Psat3g023200 Pisum sativum HOM05D001072 ORTHO05D006807 2.7e-26 122.9 82 73.2
Cre06.g252100 Chlamydomonas reinhardtii HOM05D001072 ORTHO05D006807 1.9e-24 116.7 226 34.5
Peaxi162Scf00055g00202 Petunia axillaris HOM05D001072 ORTHO05D006807 2.5e-24 116.3 65 84.6
TPR.G25341 Trifolium pratense HOM05D001072 ORTHO05D006807 8.1e-23 111.3 109 57.8
PRCOL_00002801 Prasinoderma coloniale HOM05D001072 ORTHO05D006807 9.2e-19 97.8 162 35.2
MBI03_g13043_MAGBIO Magnolia biondii HOM05D001072 ORTHO05D006807 2.0e-13 80.1 47 76.6
MCO05G029 Micromonas commoda HOM05D001072 ORTHO05D006807 2.2e-12 76.6 160 26.9


User provided reference genes

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