Gene: TPR.G25341
General Information
Structural Information
- Species Trifolium pratense
- Gene Identifier TPR.G25341
- Transcript Identifier TPR.T26204
- Gene Type Coding gene
- Location Tp57577_TGAC_v2_scaf_927 : 23598-27643 : positive
Gene Family Information
- ID HOM05D001072
- #Genes/#Species 571/100
- Phylogenetic origin
- ID ORTHO05D006807
- #Genes/#Species 138/95
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Tp57577_TGAC_v2_mRNA26204.v2
- id Tp57577_TGAC_v2_gene25341.v2
- pacid 35959829
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:1990116 | IEA | InterPro | ribosome-associated ubiquitin-dependent protein catabolic process | |
| GO:0006412 | ISO | PLAZA Homology (enrichment) | translation | HOM05D001072 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0061630 | IEA | InterPro | ubiquitin protein ligase activity | |
| GO:0003723 | ISO | PLAZA Homology (enrichment) | RNA binding | HOM05D001072 |
| GO:0003735 | ISO | PLAZA Homology (enrichment) | structural constituent of ribosome | HOM05D001072 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:1990112 | IEA | InterPro | RQC complex | |
| GO:0005840 | ISO | PLAZA Homology (enrichment) | ribosome | HOM05D001072 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR039795 | E3 ubiquitin-protein ligase listerin |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |