Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006140 Daucus carota HOM05D003791 ORTHO05D004961 0.0e+00 1874.4 933 100.0
Hma1.2p1_0051F.1_g029640 Hydrangea macrophylla HOM05D003791 ORTHO05D004961 0.0e+00 1539.6 918 81.6
GSVIVG01031443001 Vitis vinifera HOM05D003791 ORTHO05D004961 0.0e+00 1536.2 912 80.8
DCAR_018754 Daucus carota HOM05D003791 ORTHO05D004961 0.0e+00 1533.5 943 78.8
TWI79G0622 Tripterygium wilfordii HOM05D003791 ORTHO05D004961 0.0e+00 1524.2 920 80.3
CSS0014729 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 0.0e+00 1523.5 923 80.2
Thecc.09G295700 Theobroma cacao HOM05D003791 ORTHO05D004961 0.0e+00 1522.3 919 80.0
Actinidia07195 Actinidia chinensis HOM05D003791 ORTHO05D004961 0.0e+00 1521.1 921 80.5
Ciclev10027764m.g Citrus clementina HOM05D003791 ORTHO05D004961 0.0e+00 1519.2 919 79.0
Atru.chr3.3491 Acer truncatum HOM05D003791 ORTHO05D004961 0.0e+00 1518.8 919 79.0
COL.COLO4_19230 Corchorus olitorius HOM05D003791 ORTHO05D004961 0.0e+00 1516.1 911 80.5
Rhsim13G0102400 Rhododendron simsii HOM05D003791 ORTHO05D004961 0.0e+00 1512.3 912 79.5
FvH4_3g30370 Fragaria vesca HOM05D003791 ORTHO05D004961 0.0e+00 1509.2 917 77.5
FAN11G2854 Fragaria x ananassa HOM05D003791 ORTHO05D004961 0.0e+00 1509.2 917 77.4
FAN21G3702 Fragaria x ananassa HOM05D003791 ORTHO05D004961 0.0e+00 1505.3 917 77.3
Manes.11G154100 Manihot esculenta HOM05D003791 ORTHO05D004961 0.0e+00 1505.3 919 79.3
Prupe.6G114800 Prunus persica HOM05D003791 ORTHO05D004961 0.0e+00 1504.6 918 78.6
CAN.G1432.22 Capsicum annuum HOM05D003791 ORTHO05D004961 0.0e+00 1503.8 923 78.4
RcHm_v2.0_Chr5g0056311 Rosa chinensis HOM05D003791 ORTHO05D004961 0.0e+00 1503.0 917 77.4
CiPaw.13G143800 Carya illinoinensis HOM05D003791 ORTHO05D004961 0.0e+00 1502.3 923 77.9
Manes.04G011800 Manihot esculenta HOM05D003791 ORTHO05D004961 0.0e+00 1501.9 918 78.8
FAN16G1431 Fragaria x ananassa HOM05D003791 ORTHO05D004961 0.0e+00 1501.5 917 77.3
Gohir.D09G087100 Gossypium hirsutum HOM05D003791 ORTHO05D004961 0.0e+00 1499.6 918 79.4
MD11G1151700 Malus domestica HOM05D003791 ORTHO05D004961 0.0e+00 1499.6 918 78.5
TAR623G0647 Trochodendron aralioides HOM05D003791 ORTHO05D004961 0.0e+00 1499.6 918 78.8
Sopen11g026300 Solanum pennellii HOM05D003791 ORTHO05D004961 0.0e+00 1497.6 926 78.0
Haze_23510 Corylus avellana HOM05D003791 ORTHO05D004961 0.0e+00 1496.9 943 77.1
Gohir.A08G003200 Gossypium hirsutum HOM05D003791 ORTHO05D004961 0.0e+00 1495.7 918 78.8
Cc01_g10100 Coffea canephora HOM05D003791 ORTHO05D004961 0.0e+00 1495.3 918 77.9
Gohir.A09G087400 Gossypium hirsutum HOM05D003791 ORTHO05D004961 0.0e+00 1494.9 919 79.2
Solyc11g066560.3 Solanum lycopersicum HOM05D003791 ORTHO05D004961 0.0e+00 1494.2 926 77.8
Cfa010128 Carpinus fangiana HOM05D003791 ORTHO05D004961 0.0e+00 1493.8 911 78.6
Actinidia24158 Actinidia chinensis HOM05D003791 ORTHO05D004961 0.0e+00 1493.0 920 79.2
Nitab4.5_0004517g0020 Nicotiana tabacum HOM05D003791 ORTHO05D004961 0.0e+00 1490.7 937 77.1
Gohir.D08G013600 Gossypium hirsutum HOM05D003791 ORTHO05D004961 0.0e+00 1489.6 919 78.6
Solyc06g074740.3 Solanum lycopersicum HOM05D003791 ORTHO05D004961 0.0e+00 1489.2 927 77.7
CANSAT64G0962 Cannabis sativa HOM05D003791 ORTHO05D004961 0.0e+00 1487.6 921 77.9
Peaxi162Scf00150g00213 Petunia axillaris HOM05D003791 ORTHO05D004961 0.0e+00 1487.2 924 77.9
Lj3g0020816 Lotus japonicus HOM05D003791 ORTHO05D004961 0.0e+00 1486.9 920 76.2
TPR.G35046 Trifolium pratense HOM05D003791 ORTHO05D004961 0.0e+00 1486.9 921 76.2
Migut.N02533 Erythranthe guttata HOM05D003791 ORTHO05D004961 0.0e+00 1484.5 919 78.0
Gorai.004G007900 Gossypium raimondii HOM05D003791 ORTHO05D004961 0.0e+00 1483.8 918 78.2
Potri.001G212700 Populus trichocarpa HOM05D003791 ORTHO05D004961 0.0e+00 1483.8 919 77.7
Sopen06g031150 Solanum pennellii HOM05D003791 ORTHO05D004961 0.0e+00 1481.8 925 77.5
Glyma.11G191000 Glycine max HOM05D003791 ORTHO05D004961 0.0e+00 1481.5 920 77.2
Eucgr.B03911 Eucalyptus grandis HOM05D003791 ORTHO05D004961 0.0e+00 1479.2 921 77.3
Sabra04G0148600 Salix brachista HOM05D003791 ORTHO05D004961 0.0e+00 1477.2 928 76.9
Glyma.12G083300 Glycine max HOM05D003791 ORTHO05D004961 0.0e+00 1475.7 917 76.6
CiPaw.14G105700 Carya illinoinensis HOM05D003791 ORTHO05D004961 0.0e+00 1475.3 922 76.5
Lj3g0026116 Lotus japonicus HOM05D003791 ORTHO05D004961 0.0e+00 1474.5 924 76.1
Duzib168G1694 Durio zibethinus HOM05D003791 ORTHO05D004961 0.0e+00 1474.1 919 77.5
MD03G1129800 Malus domestica HOM05D003791 ORTHO05D004961 0.0e+00 1472.6 918 76.9
Phvul.011G088100 Phaseolus vulgaris HOM05D003791 ORTHO05D004961 0.0e+00 1467.2 919 76.0
Potri.009G002400 Populus trichocarpa HOM05D003791 ORTHO05D004961 0.0e+00 1467.2 920 76.7
PGR102G1149 Punica granatum HOM05D003791 ORTHO05D004961 0.0e+00 1465.3 921 77.5
VMungo1127G0886 Vigna mungo HOM05D003791 ORTHO05D004961 0.0e+00 1464.5 922 76.2
CAN.G546.67 Capsicum annuum HOM05D003791 ORTHO05D004961 0.0e+00 1463.0 915 77.2
Ca_19327_v3 Cicer arietinum L. HOM05D003791 ORTHO05D004961 0.0e+00 1462.6 921 75.4
CsaV3_1G014360 Cucumis sativus L. HOM05D003791 ORTHO05D004961 0.0e+00 1461.8 921 76.1
MELO3C004827.2 Cucumis melo HOM05D003791 ORTHO05D004961 0.0e+00 1461.0 921 76.0
TAR369G0287 Trochodendron aralioides HOM05D003791 ORTHO05D004961 0.0e+00 1460.7 920 76.3
ECA233G0170 Erigeron canadensis HOM05D003791 ORTHO05D004961 0.0e+00 1460.3 919 76.8
Psat7g191520 Pisum sativum HOM05D003791 ORTHO05D004961 0.0e+00 1459.5 919 75.2
Lalb_Chr22g0350471 Lupinus albus HOM05D003791 ORTHO05D004961 0.0e+00 1456.8 918 75.9
CSS0049530 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 0.0e+00 1452.6 928 76.2
arahy.Tifrunner.gnm1.ann1.53PLGZ Arachis hypogaea HOM05D003791 ORTHO05D004961 0.0e+00 1451.4 925 75.4
Medtr4g056480 Medicago truncatula HOM05D003791 ORTHO05D004961 0.0e+00 1451.4 921 74.9
arahy.Tifrunner.gnm1.ann1.DSMN0K Arachis hypogaea HOM05D003791 ORTHO05D004961 0.0e+00 1451.0 925 75.4
Sed0022437 Sechium edule HOM05D003791 ORTHO05D004961 0.0e+00 1450.6 925 75.8
HanXRQChr13g0403561 Helianthus annuus HOM05D003791 ORTHO05D004961 0.0e+00 1449.9 918 76.3
Gorai.006G103500 Gossypium raimondii HOM05D003791 ORTHO05D004961 0.0e+00 1446.4 919 77.4
Duzib170G1073 Durio zibethinus HOM05D003791 ORTHO05D004961 0.0e+00 1444.1 918 76.0
Oeu035522.1 Olea europaea HOM05D003791 ORTHO05D004961 0.0e+00 1435.6 919 76.9
Nitab4.5_0000173g0320 Nicotiana tabacum HOM05D003791 ORTHO05D004961 0.0e+00 1434.1 916 76.3
Nn2g13909 Nelumbo nucifera HOM05D003791 ORTHO05D004961 0.0e+00 1431.4 918 75.1
Aqoxy1G01033 Aquilegia oxysepala HOM05D003791 ORTHO05D004961 0.0e+00 1429.1 918 74.3
vmacro03244 Vaccinium macrocarpon HOM05D003791 ORTHO05D004961 0.0e+00 1421.0 1145 63.8
SalBow3G1938 Salvia bowleyana HOM05D003791 ORTHO05D004961 0.0e+00 1416.0 928 75.0
THA.LOC104800566 Tarenaya hassleriana HOM05D003791 ORTHO05D004961 0.0e+00 1408.7 920 73.8
Lsat_1_v5_gn_6_42140 Lactuca sativa HOM05D003791 ORTHO05D004961 0.0e+00 1405.6 918 75.1
PSO339G5439 Papaver somniferum HOM05D003791 ORTHO05D004961 0.0e+00 1403.3 922 73.6
Dinv29393 Davidia involucrata HOM05D003791 ORTHO05D004961 0.0e+00 1392.5 829 80.9
PSO063G7392 Papaver somniferum HOM05D003791 ORTHO05D004961 0.0e+00 1392.5 922 72.3
arahy.Tifrunner.gnm1.ann1.BYIB55 Arachis hypogaea HOM05D003791 ORTHO05D004961 0.0e+00 1390.2 920 73.5
Thhalv10006697m.g Eutrema salsugineum HOM05D003791 ORTHO05D004961 0.0e+00 1387.5 937 71.9
Sabra09G0001100 Salix brachista HOM05D003791 ORTHO05D004961 0.0e+00 1387.1 968 71.0
C05p06320 Brassica napus HOM05D003791 ORTHO05D004961 0.0e+00 1384.0 941 72.1
BolC5t29388H Brassica oleracea HOM05D003791 ORTHO05D004961 0.0e+00 1384.0 928 72.7
Sp1g06840 Schrenkiella parvula HOM05D003791 ORTHO05D004961 0.0e+00 1382.9 931 72.5
SGA_v2.0_scaffold83G26445 Striga asiatica HOM05D003791 ORTHO05D004961 0.0e+00 1380.9 842 77.8
Lalb_Chr03g0027821 Lupinus albus HOM05D003791 ORTHO05D004961 0.0e+00 1380.5 919 71.9
Hund00856 Selenicereus undatus HOM05D003791 ORTHO05D004961 0.0e+00 1380.2 920 70.4
Nitab4.5_0003470g0120 Nicotiana tabacum HOM05D003791 ORTHO05D004961 0.0e+00 1377.5 870 76.7
A06p05250 Brassica napus HOM05D003791 ORTHO05D004961 0.0e+00 1376.3 944 71.6
BraA06t23732Z Brassica rapa HOM05D003791 ORTHO05D004961 0.0e+00 1376.3 944 71.6
Carub.0001s0755 Capsella rubella HOM05D003791 ORTHO05D004961 0.0e+00 1372.5 933 71.9
CARHR008020 Cardamine hirsuta HOM05D003791 ORTHO05D004961 0.0e+00 1372.1 925 72.1
unitig_22.g5654 Utricularia gibba HOM05D003791 ORTHO05D004961 0.0e+00 1372.1 941 71.3
AT1G08190 Arabidopsis thaliana HOM05D003791 ORTHO05D004961 0.0e+00 1366.3 939 71.7
AL1G18600 Arabidopsis lyrata HOM05D003791 ORTHO05D004961 0.0e+00 1365.1 937 71.9
Aa31LG11G12710 Aethionema arabicum HOM05D003791 ORTHO05D004961 0.0e+00 1362.4 923 71.1
CDE09G0630 Ceratophyllum demersum HOM05D003791 ORTHO05D004961 0.0e+00 1338.6 923 68.7
ATR0580G402 Amborella trichopoda HOM05D003791 ORTHO05D004961 0.0e+00 1329.7 920 70.1
EL10Ac9g20994 Beta vulgaris HOM05D003791 ORTHO05D004961 0.0e+00 1329.7 917 68.4
Peaxi162Scf00114g00310 Petunia axillaris HOM05D003791 ORTHO05D004961 0.0e+00 1328.5 921 71.1
arahy.Tifrunner.gnm1.ann1.EI6HBJ Arachis hypogaea HOM05D003791 ORTHO05D004961 0.0e+00 1310.8 920 70.2
Os04g0195000 Oryza sativa ssp. japonica HOM05D003791 ORTHO05D004961 0.0e+00 1302.0 920 67.8
SHI06192 Sapria himalayana HOM05D003791 ORTHO05D004961 0.0e+00 1290.8 867 71.5
AUR62024040 Chenopodium quinoa HOM05D003791 ORTHO05D004961 0.0e+00 1286.2 909 66.8
Lj1A216G25 Lonicera japonica HOM05D003791 ORTHO05D004961 0.0e+00 1265.8 786 78.2
Sc21g0003980 Simmondsia chinensis HOM05D003791 ORTHO05D004961 0.0e+00 1257.7 746 79.6
DCAR_015496 Daucus carota HOM05D003791 ORTHO05D004961 0.0e+00 1219.5 940 65.0
SEGI_35272 Sequoiadendron giganteum HOM05D003791 ORTHO05D004961 0.0e+00 1211.4 925 63.7
CSS0001832 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 0.0e+00 1206.8 726 79.9
Dinv12566 Davidia involucrata HOM05D003791 ORTHO05D004961 0.0e+00 1154.0 687 81.5
AUR62040426 Chenopodium quinoa HOM05D003791 ORTHO05D004961 0.0e+00 1125.5 770 69.2
AagrBONN_evm.TU.Sc2ySwM_368.1978 Anthoceros agrestis HOM05D003791 ORTHO05D004961 0.0e+00 1105.9 950 56.6
Mapoly0052s0125 Marchantia polymorpha HOM05D003791 ORTHO05D004961 0.0e+00 1102.0 956 56.9
Pp3c15_14510 Physcomitrium patens HOM05D003791 ORTHO05D004961 0.0e+00 1090.5 932 57.3
Ah.01g004870 Amaranthus hybridus HOM05D003791 ORTHO05D004961 0.0e+00 1082.0 916 59.7
ClCG09G017560 Citrullus lanatus HOM05D003791 ORTHO05D004961 2.8e-294 1015.4 686 72.2
HPP92_012850 Vanilla planifolia HOM05D003791 ORTHO05D004961 2.9e-283 978.8 627 74.2
SMO118G0273 Selaginella moellendorffii HOM05D003791 ORTHO05D004961 4.0e-272 941.8 783 57.5
arahy.Tifrunner.gnm1.ann1.SF2S3L Arachis hypogaea HOM05D003791 ORTHO05D004961 2.7e-260 902.5 628 69.6
HPP92_012843 Vanilla planifolia HOM05D003791 ORTHO05D004961 1.3e-259 900.2 557 76.5
Nn6g35161 Nelumbo nucifera HOM05D003791 ORTHO05D004961 4.2e-253 878.6 561 76.1
QL01p014586 Quercus lobata HOM05D003791 ORTHO05D004961 4.3e-234 815.5 521 75.6
QL03p064651 Quercus lobata HOM05D003791 ORTHO05D004961 9.6e-226 787.7 598 66.6
FAN21G1169 Fragaria x ananassa HOM05D003791 ORTHO05D004961 1.4e-216 757.3 499 72.9
QL03p064641 Quercus lobata HOM05D003791 ORTHO05D004961 5.9e-199 698.7 395 81.8
Nn6g32817 Nelumbo nucifera HOM05D003791 ORTHO05D004961 5.5e-181 639.0 386 78.8
PRCOL_00006500 Prasinoderma coloniale HOM05D003791 ORTHO05D004961 5.4e-176 622.5 1037 37.0
Nn6g35165 Nelumbo nucifera HOM05D003791 ORTHO05D004961 3.8e-174 616.3 361 79.8
Zm00001eb066510 Zea mays HOM05D003791 ORTHO05D004961 1.4e-147 528.1 412 61.7
MCO08G243 Micromonas commoda HOM05D003791 ORTHO05D004961 4.3e-141 506.5 836 37.0
Mapoly0052s0123 Marchantia polymorpha HOM05D003791 ORTHO05D004961 2.4e-139 500.7 415 59.3
Cpa.g.sc47.25 Carica papaya HOM05D003791 ORTHO05D004961 6.7e-118 429.5 480 51.0
TWI75G0171 Tripterygium wilfordii HOM05D003791 ORTHO05D004961 2.1e-111 407.9 253 76.7
Cpa.g.sc47.26 Carica papaya HOM05D003791 ORTHO05D004961 1.8e-107 394.8 223 83.0
Cre03.g209281 Chlamydomonas reinhardtii HOM05D003791 ORTHO05D004961 1.5e-106 391.7 1051 27.7
Zm00001eb043500 Zea mays HOM05D003791 ORTHO05D004961 2.3e-102 377.9 279 64.9
SMO266G0036 Selaginella moellendorffii HOM05D003791 ORTHO05D004961 5.7e-101 373.2 860 31.2
ClCG00G003900 Citrullus lanatus HOM05D003791 ORTHO05D004961 1.0e-97 362.5 249 69.9
Zm00001eb057600 Zea mays HOM05D003791 ORTHO05D004961 8.2e-92 342.8 253 64.4
Zm00001eb364150 Zea mays HOM05D003791 ORTHO05D004961 8.2e-92 342.8 253 64.4
CBR_g63066 Chara braunii HOM05D003791 ORTHO05D000002 8.5e-89 332.8 365 46.3
arahy.Tifrunner.gnm1.ann1.5PQ0NB Arachis hypogaea HOM05D003791 ORTHO05D004961 5.0e-81 307.0 296 55.7
DCAR_031428 Daucus carota HOM05D003791 ORTHO05D004961 1.2e-77 295.8 147 95.9
SMO297G0006 Selaginella moellendorffii HOM05D003791 ORTHO05D004961 9.2e-51 206.5 169 52.1
FAN21G2323 Fragaria x ananassa HOM05D003791 ORTHO05D004961 2.7e-50 204.9 240 49.2
Zm00001eb157910 Zea mays HOM05D003791 ORTHO05D004961 3.6e-47 194.5 149 59.1
Zm00001eb222800 Zea mays HOM05D003791 ORTHO05D004961 3.6e-47 194.5 149 59.1
Ah.09g226470 Amaranthus hybridus HOM05D003791 ORTHO05D019539 2.6e-45 188.3 170 53.5
Zm00001eb291510 Zea mays HOM05D003791 ORTHO05D004961 9.8e-45 186.4 139 60.4
Nn2g15996 Nelumbo nucifera HOM05D003791 ORTHO05D004961 3.5e-42 177.9 118 69.5
GSVIVG01024429001 Vitis vinifera HOM05D003791 ORTHO05D013423 2.5e-40 171.8 103 77.7
Oeu000610.1 Olea europaea HOM05D003791 ORTHO05D004961 3.3e-40 171.4 222 47.3
Zm00001eb291520 Zea mays HOM05D003791 ORTHO05D004961 7.3e-40 170.2 99 79.8
AUR62024999 Chenopodium quinoa HOM05D003791 ORTHO05D019539 5.2e-38 164.1 110 70.9
CBR_g75953 Chara braunii HOM05D003791 ORTHO05D004961 9.9e-37 159.8 141 47.5
AUR62024027 Chenopodium quinoa HOM05D003791 ORTHO05D000022 1.3e-33 149.4 98 74.5
CSS0038043 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 1.1e-32 146.4 78 83.3
Lj1C215T10 Lonicera japonica HOM05D003791 ORTHO05D019539 1.9e-32 145.6 120 60.8
CSS0018078 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 3.3e-32 144.8 78 82.1
CSS0027626 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 5.6e-32 144.1 83 79.5
CSS0039906 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 5.6e-32 144.1 74 87.8
CSS0036642 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 1.6e-31 142.5 78 82.1
Cfa022812 Carpinus fangiana HOM05D003791 ORTHO05D123815 1.4e-30 139.4 723 22.1
Ah.10g024760 Amaranthus hybridus HOM05D001024 ORTHO05D000878 4.0e-30 137.9 140 48.6
CSS0017290 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 5.2e-30 137.5 74 82.4
DCAR_024781 Daucus carota HOM05D003791 ORTHO05D004961 5.2e-30 137.5 88 75.0
Ah.13g066400 Amaranthus hybridus HOM05D003791 ORTHO05D019539 2.0e-29 135.6 115 53.0
Nn2g15995 Nelumbo nucifera HOM05D003791 ORTHO05D004961 1.1e-27 129.8 65 90.8
AUR62040427 Chenopodium quinoa HOM05D003791 ORTHO05D019539 1.2e-26 126.3 125 48.0
GSVIVG01004781001 Vitis vinifera HOM05D003791 ORTHO05D013423 1.9e-24 119.0 78 71.8
TWI75G0356 Tripterygium wilfordii HOM05D003791 ORTHO05D004961 3.2e-19 101.7 128 46.1
RcHm_v2.0_Chr5g0056291 Rosa chinensis HOM05D003791 ORTHO05D004961 1.1e-16 93.2 87 55.2
CSS0019611 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D019539 1.4e-14 86.3 132 47.0
GSVIVG01014936001 Vitis vinifera HOM05D003919 ORTHO05D004906 1.6e-10 72.8 56 64.3
PSO339G1674 Papaver somniferum HOM05D003791 ORTHO05D004961 2.3e-09 68.9 46 60.9
HanXRQChr15g0465621 Helianthus annuus HOM05D003791 ORTHO05D019539 1.9e-08 65.9 66 53.0
AagrBONN_evm.TU.Sc2ySwM_368.1888 Anthoceros agrestis HOM05D004575 ORTHO05D004251 4.3e-08 64.7 42 66.7
Pp3c9_21930 Physcomitrium patens HOM05D003791 ORTHO05D308914 2.4e-06 58.9 48 52.1


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