Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_005496 Daucus carota HOM05D006139 ORTHO05D007681 5.6e-127 457.6 230 100.0
Lj4A728T41 Lonicera japonica HOM05D006139 ORTHO05D007681 2.2e-94 349.4 238 73.1
Potri.011G107400 Populus trichocarpa HOM05D006139 ORTHO05D007681 1.1e-93 347.1 232 73.3
Hma1.2p1_0412F.1_g147150 Hydrangea macrophylla HOM05D006139 ORTHO05D007681 2.4e-93 345.9 232 72.0
CSS0045945 Camellia sinensis var. sinensis HOM05D006139 ORTHO05D007681 2.6e-92 342.4 232 72.4
GSVIVG01031668001 Vitis vinifera HOM05D006139 ORTHO05D007681 1.3e-91 340.1 232 73.7
Haze_11079 Corylus avellana HOM05D006139 ORTHO05D007681 3.8e-91 338.6 232 70.7
Atru.chr2.2053 Acer truncatum HOM05D006139 ORTHO05D007681 1.1e-90 337.0 232 72.0
PGSC0003DMG400014069 Solanum tuberosum HOM05D006139 ORTHO05D007681 2.5e-90 335.9 230 73.9
Manes.03G099000 Manihot esculenta HOM05D006139 ORTHO05D007681 4.2e-90 335.1 232 69.8
Aqoxy2G03950 Aquilegia oxysepala HOM05D006139 ORTHO05D007681 9.4e-90 334.0 233 71.7
Sopen09g036170 Solanum pennellii HOM05D006139 ORTHO05D007681 2.1e-89 332.8 230 73.0
QL10p044141 Quercus lobata HOM05D006139 ORTHO05D007681 8.0e-89 330.9 265 63.0
Rhsim07G0086500 Rhododendron simsii HOM05D006139 ORTHO05D007681 8.0e-89 330.9 242 69.4
Nitab4.5_0001526g0130 Nicotiana tabacum HOM05D006139 ORTHO05D007681 2.3e-88 329.3 230 72.6
Prupe.1G178000 Prunus persica HOM05D006139 ORTHO05D007681 6.7e-88 327.8 232 69.4
MELO3C017678.2 Cucumis melo HOM05D006139 ORTHO05D007681 8.8e-88 327.4 232 71.6
ECA246G3778 Erigeron canadensis HOM05D006139 ORTHO05D007681 8.8e-88 327.4 230 70.9
Nn3g20967 Nelumbo nucifera HOM05D006139 ORTHO05D007681 8.8e-88 327.4 233 70.0
CsaV3_4G003770 Cucumis sativus L. HOM05D006139 ORTHO05D007681 1.1e-87 327.0 232 71.1
Migut.N00440 Erythranthe guttata HOM05D006139 ORTHO05D007681 1.5e-87 326.6 232 69.8
CiPaw.01G108300 Carya illinoinensis HOM05D006139 ORTHO05D007681 2.0e-87 326.2 232 68.5
Solyc09g098230.3 Solanum lycopersicum HOM05D006139 ORTHO05D007681 2.0e-87 326.2 230 71.3
Sabra11G0095200 Salix brachista HOM05D006139 ORTHO05D007681 5.7e-87 324.7 232 70.3
SGA_v2.0_scaffold109G31142 Striga asiatica HOM05D006139 ORTHO05D007681 7.4e-87 324.3 232 68.5
vmacro13984 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 7.4e-87 324.3 252 65.9
Ciclev10019318m.g Citrus clementina HOM05D006139 ORTHO05D007681 2.2e-86 322.8 232 69.0
Lsat_1_v5_gn_3_24941 Lactuca sativa HOM05D006139 ORTHO05D007681 2.2e-86 322.8 231 68.4
Cc03_g10570 Coffea canephora HOM05D006139 ORTHO05D007681 2.8e-86 322.4 232 69.8
Sed0017452 Sechium edule HOM05D006139 ORTHO05D007681 3.1e-85 318.9 232 68.5
Lalb_Chr06g0164661 Lupinus albus HOM05D006139 ORTHO05D007681 5.3e-85 318.2 232 67.2
RcHm_v2.0_Chr4g0409801 Rosa chinensis HOM05D006139 ORTHO05D007681 9.1e-85 317.4 232 67.7
arahy.Tifrunner.gnm1.ann1.46LBLY Arachis hypogaea HOM05D006139 ORTHO05D007681 1.6e-84 316.6 232 68.1
MSTRG.17865 Avicennia marina HOM05D006139 ORTHO05D007681 1.6e-84 316.6 231 67.5
CANSAT11G1108 Cannabis sativa HOM05D006139 ORTHO05D007681 2.0e-84 316.2 232 68.1
Sc22g0003230 Simmondsia chinensis HOM05D006139 ORTHO05D007681 3.5e-84 315.5 232 68.1
Eucgr.F03241 Eucalyptus grandis HOM05D006139 ORTHO05D007681 4.5e-84 315.1 232 66.4
Lj5g0023092 Lotus japonicus HOM05D006139 ORTHO05D007681 4.5e-84 315.1 232 67.2
arahy.Tifrunner.gnm1.ann1.JAL8JD Arachis hypogaea HOM05D006139 ORTHO05D007681 7.7e-84 314.3 239 66.5
MD13G1278700 Malus domestica HOM05D006139 ORTHO05D007681 7.7e-84 314.3 233 67.8
Thecc.07G123700 Theobroma cacao HOM05D006139 ORTHO05D007681 1.7e-83 313.2 232 65.5
FvH4_4g12150 Fragaria vesca HOM05D006139 ORTHO05D007681 1.1e-82 310.5 232 65.9
FAN12G2778 Fragaria x ananassa HOM05D006139 ORTHO05D007681 1.1e-82 310.5 232 65.9
AUR62003718 Chenopodium quinoa HOM05D006139 ORTHO05D007681 4.2e-82 308.5 237 64.6
TPR.G8907 Trifolium pratense HOM05D006139 ORTHO05D007681 5.5e-82 308.1 228 67.1
Psat6g243280 Pisum sativum HOM05D006139 ORTHO05D007681 9.4e-82 307.4 232 66.4
Duzib213G0841 Durio zibethinus HOM05D006139 ORTHO05D007681 2.1e-81 306.2 232 65.9
TPR.G8879 Trifolium pratense HOM05D006139 ORTHO05D007681 2.1e-81 306.2 232 65.9
ATR0609G005 Amborella trichopoda HOM05D006139 ORTHO05D007681 4.7e-81 305.1 233 64.4
Medtr1g116980 Medicago truncatula HOM05D006139 ORTHO05D007681 4.7e-81 305.1 232 65.1
Glyma.20G248800 Glycine max HOM05D006139 ORTHO05D007681 6.1e-81 304.7 232 65.1
Peaxi162Scf00286g00443 Petunia axillaris HOM05D006139 ORTHO05D007681 1.0e-80 303.9 230 67.8
PSO675G6876 Papaver somniferum HOM05D006139 ORTHO05D007681 1.4e-80 303.5 230 64.3
PSO017G2886 Papaver somniferum HOM05D006139 ORTHO05D007681 1.8e-80 303.1 232 66.4
TWI38G2388 Tripterygium wilfordii HOM05D006139 ORTHO05D007681 1.8e-80 303.1 232 63.4
CDE02G2779 Ceratophyllum demersum HOM05D006139 ORTHO05D007681 2.3e-80 302.8 234 65.4
VMungo0720G1636 Vigna mungo HOM05D006139 ORTHO05D007681 2.3e-80 302.8 232 64.7
Zm00001eb116810 Zea mays HOM05D006139 ORTHO05D007681 8.8e-80 300.8 234 62.8
HPP92_015930 Vanilla planifolia HOM05D006139 ORTHO05D007681 2.8e-78 295.8 232 65.5
TAR365G1167 Trochodendron aralioides HOM05D006139 ORTHO05D007681 4.8e-78 295.0 206 68.4
CARHR017480 Cardamine hirsuta HOM05D006139 ORTHO05D007681 8.2e-78 294.3 230 65.2
Sp1g15110 Schrenkiella parvula HOM05D006139 ORTHO05D007681 8.2e-78 294.3 230 64.8
Thhalv10007085m.g Eutrema salsugineum HOM05D006139 ORTHO05D007681 1.4e-77 293.5 230 65.2
C05p15280 Brassica napus HOM05D006139 ORTHO05D007681 2.4e-77 292.7 230 66.1
BcaC05g25552 Brassica carinata HOM05D006139 ORTHO05D007681 4.1e-77 292.0 230 65.7
Carub.0001s1670 Capsella rubella HOM05D006139 ORTHO05D007681 1.2e-76 290.4 228 64.9
AT1G16970 Arabidopsis thaliana HOM05D006139 ORTHO05D007681 2.7e-76 289.3 230 64.8
Phvul.007G001600 Phaseolus vulgaris HOM05D006139 ORTHO05D007681 2.7e-76 289.3 220 65.5
Gohir.A01G052100 Gossypium hirsutum HOM05D006139 ORTHO05D007681 5.9e-76 288.1 231 62.3
A06p12870 Brassica napus HOM05D006139 ORTHO05D007681 7.7e-76 287.7 230 64.8
BcaB02g06659 Brassica carinata HOM05D006139 ORTHO05D007681 2.9e-75 285.8 230 64.8
Gorai.002G052100 Gossypium raimondii HOM05D006139 ORTHO05D007681 1.6e-73 280.0 231 60.6
PGR031G2404 Punica granatum HOM05D006139 ORTHO05D007681 4.0e-72 275.4 232 59.9
THA.LOC104812308 Tarenaya hassleriana HOM05D006139 ORTHO05D007681 6.8e-72 274.6 229 60.3
Nitab4.5_0001687g0050 Nicotiana tabacum HOM05D006139 ORTHO05D007681 1.8e-69 266.5 186 73.1
Mapoly0113s0020 Marchantia polymorpha HOM05D006139 ORTHO05D007681 5.4e-69 265.0 235 56.6
Cpa.g.sc77.50 Carica papaya HOM05D006139 ORTHO05D007681 2.7e-68 262.7 194 68.6
Hund19684 Selenicereus undatus HOM05D006139 ORTHO05D007681 2.9e-67 259.2 234 60.3
COL.COLO4_17513 Corchorus olitorius HOM05D006139 ORTHO05D007681 4.2e-66 255.4 228 58.8
MBI07_g00628_MAGBIO Magnolia biondii HOM05D006139 ORTHO05D007681 7.2e-66 254.6 232 56.5
ClCG07G016640 Citrullus lanatus HOM05D006139 ORTHO05D007681 4.7e-65 251.9 231 59.7
BolC5t30234H Brassica oleracea HOM05D006139 ORTHO05D007681 2.6e-63 246.1 233 58.8
BraA06t24447Z Brassica rapa HOM05D006139 ORTHO05D007681 4.4e-63 245.4 230 58.7
AUR62018029 Chenopodium quinoa HOM05D006139 ORTHO05D007681 2.4e-61 239.6 253 52.6
FAN12G0395 Fragaria x ananassa HOM05D006139 ORTHO05D007681 5.4e-61 238.4 232 55.6
AagrBONN_evm.TU.Sc2ySwM_228.1556 Anthoceros agrestis HOM05D006139 ORTHO05D007681 9.2e-61 237.7 234 52.1
FAN07G2792 Fragaria x ananassa HOM05D006139 ORTHO05D007681 1.2e-60 237.3 232 55.2
FAN17G0552 Fragaria x ananassa HOM05D006139 ORTHO05D007681 2.3e-59 233.0 232 54.7
SMO361G0513 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 4.3e-58 228.8 232 50.4
Gohir.D01G041500 Gossypium hirsutum HOM05D006139 ORTHO05D007681 9.5e-58 227.6 192 59.4
SMO361G0769 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 2.1e-57 226.5 232 50.0
Ah.03g143030 Amaranthus hybridus HOM05D006139 ORTHO05D007681 2.9e-54 216.1 180 62.8
unitig_578.g15954 Utricularia gibba HOM05D006139 ORTHO05D004041 8.3e-54 214.5 164 64.0
Aa31LG7G1410 Aethionema arabicum HOM05D006139 ORTHO05D007681 1.2e-52 210.7 230 52.2
FAN22G0061 Fragaria x ananassa HOM05D006139 ORTHO05D007681 3.3e-50 202.6 167 62.3
CAN.G710.40 Capsicum annuum HOM05D006139 ORTHO05D007681 2.6e-47 193.0 229 51.1
CBR_g19434 Chara braunii HOM05D006139 ORTHO05D007681 2.6e-47 193.0 229 44.1
Ca_11425_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 6.0e-44 181.8 135 68.9
Pp3c18_7140 Physcomitrium patens HOM05D006139 ORTHO05D007681 6.6e-43 178.3 234 44.0
arahy.Tifrunner.gnm1.ann1.6RHH59 Arachis hypogaea HOM05D006139 ORTHO05D007681 2.3e-40 169.9 131 64.9
Dinv44237 Davidia involucrata HOM05D006139 ORTHO05D007681 4.4e-39 165.6 97 79.4
CANSAT78G0600 Cannabis sativa HOM05D006139 ORTHO05D007681 3.1e-32 142.9 118 58.5
Ca_11424_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 1.7e-27 127.1 97 62.9
Cre13.g607500 Chlamydomonas reinhardtii HOM05D006139 ORTHO05D007681 3.2e-21 106.3 249 33.3
HanXRQChr13g0406711 Helianthus annuus HOM05D006139 ORTHO05D007681 1.9e-18 97.1 53 79.2
BolC4t22161H Brassica oleracea HOM05D006139 ORTHO05D007681 2.5e-18 96.7 73 67.1
MCO14G338 Micromonas commoda HOM05D006139 ORTHO05D007681 9.0e-16 88.2 197 32.5
Potri.006G132501 Populus trichocarpa HOM05D006139 ORTHO05D007681 2.7e-12 76.6 78 56.4
Cfa021664 Carpinus fangiana HOM05D006139 ORTHO05D007681 2.1e-09 67.0 241 28.2
Dinv25612 Davidia involucrata HOM05D000447 ORTHO05D007681 2.4e-08 63.5 38 81.6


User provided reference genes

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