Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc140.34 Carica papaya HOM05D005583 ORTHO05D006507 0.0e+00 1680.2 869 100.0
Duzib147G0322 Durio zibethinus HOM05D005583 ORTHO05D006507 3.9e-144 516.5 1068 37.8
Atru.chr6.2177 Acer truncatum HOM05D005583 ORTHO05D006507 1.7e-136 491.1 1018 39.0
CiPaw.04G023600 Carya illinoinensis HOM05D005583 ORTHO05D006507 7.1e-130 469.2 1072 35.5
Cfa007452 Carpinus fangiana HOM05D005583 ORTHO05D006507 5.6e-127 459.5 1184 34.0
Haze_14649 Corylus avellana HOM05D005583 ORTHO05D006507 3.6e-126 456.8 1183 33.9
Gohir.D07G225712 Gossypium hirsutum HOM05D005583 ORTHO05D006507 8.1e-126 455.7 1177 34.3
QL02p077165 Quercus lobata HOM05D005583 ORTHO05D006507 1.4e-125 454.9 1134 34.6
Hma1.2p1_0697F.1_g204850 Hydrangea macrophylla HOM05D005583 ORTHO05D006507 2.4e-125 454.1 1004 36.7
Gorai.001G260400 Gossypium raimondii HOM05D005583 ORTHO05D006507 5.2e-125 453.0 1134 35.1
Ciclev10014025m.g Citrus clementina HOM05D005583 ORTHO05D006507 6.4e-123 446.0 1223 33.8
MD17G1038000 Malus domestica HOM05D005583 ORTHO05D006507 8.4e-123 445.7 1000 36.3
TAR629G0978 Trochodendron aralioides HOM05D005583 ORTHO05D006507 1.2e-121 441.8 1055 34.7
COL.COLO4_04368 Corchorus olitorius HOM05D005583 ORTHO05D006507 2.7e-121 440.7 1220 33.3
Dinv35039 Davidia involucrata HOM05D005583 ORTHO05D006507 5.6e-119 433.0 1161 33.3
TWI56G1339 Tripterygium wilfordii HOM05D005583 ORTHO05D006507 1.8e-117 427.9 1017 33.9
Actinidia36072 Actinidia chinensis HOM05D005583 ORTHO05D006507 2.0e-116 424.5 1192 32.8
Prupe.3G281300 Prunus persica HOM05D005583 ORTHO05D006507 1.1e-114 418.7 1035 34.5
Potri.017G070500 Populus trichocarpa HOM05D005583 ORTHO05D006507 9.3e-114 415.6 1229 31.4
CANSAT64G0115 Cannabis sativa HOM05D005583 ORTHO05D006507 1.6e-113 414.8 1053 33.8
GSVIVG01032508001 Vitis vinifera HOM05D005583 ORTHO05D006507 1.6e-113 414.8 1099 34.5
RcHm_v2.0_Chr2g0170851 Rosa chinensis HOM05D005583 ORTHO05D006507 4.6e-113 413.3 992 34.3
FAN14G4719 Fragaria x ananassa HOM05D005583 ORTHO05D006507 7.4e-111 406.0 1095 33.4
CSS0039879 Camellia sinensis var. sinensis HOM05D005583 ORTHO05D006507 9.6e-111 405.6 1198 32.5
FvH4_6g50430 Fragaria vesca HOM05D005583 ORTHO05D006507 9.6e-111 405.6 1099 33.2
Nitab4.5_0001709g0090 Nicotiana tabacum HOM05D005583 ORTHO05D006507 1.3e-110 405.2 1144 32.6
Manes.15G181100 Manihot esculenta HOM05D005583 ORTHO05D006507 1.6e-110 404.8 1183 33.0
Glyma.01G077200 Glycine max HOM05D005583 ORTHO05D006507 2.6e-108 397.5 1094 33.4
Nitab4.5_0001727g0030 Nicotiana tabacum HOM05D005583 ORTHO05D006507 1.2e-105 388.7 1154 32.3
Nn4g22860 Nelumbo nucifera HOM05D005583 ORTHO05D006507 1.6e-105 388.3 1205 30.6
TPR.G30816 Trifolium pratense HOM05D005583 ORTHO05D006507 2.1e-105 387.9 1018 33.2
ClCG10G014410 Citrullus lanatus HOM05D005583 ORTHO05D006507 2.7e-105 387.5 1122 33.2
Cc07_g02460 Coffea canephora HOM05D005583 ORTHO05D006507 1.0e-104 385.6 1103 33.1
FAN09G0355 Fragaria x ananassa HOM05D005583 ORTHO05D006507 1.0e-104 385.6 956 34.6
Medtr7g034405 Medicago truncatula HOM05D005583 ORTHO05D006507 1.8e-104 384.8 1004 34.2
Lj7A589G58 Lonicera japonica HOM05D005583 ORTHO05D006507 2.3e-104 384.4 1140 32.1
PGSC0003DMG400006911 Solanum tuberosum HOM05D005583 ORTHO05D006507 8.7e-104 382.5 1058 32.8
PGR142G3038 Punica granatum HOM05D005583 ORTHO05D006507 2.5e-103 380.9 1089 32.8
CsaV3_3G042180 Cucumis sativus L. HOM05D005583 ORTHO05D006507 5.6e-103 379.8 1115 32.6
Hund12473 Selenicereus undatus HOM05D005583 ORTHO05D006507 7.4e-103 379.4 1160 31.8
CSS0006408 Camellia sinensis var. sinensis HOM05D005583 ORTHO05D006507 2.1e-102 377.9 1226 31.4
MBI15_g24176_MAGBIO Magnolia biondii HOM05D005583 ORTHO05D006507 1.4e-101 375.2 1087 32.0
Psat3g171760 Pisum sativum HOM05D005583 ORTHO05D006507 1.4e-101 375.2 963 33.5
CAN.G983.2 Capsicum annuum HOM05D005583 ORTHO05D006507 4.0e-101 373.6 1149 31.4
Sabra17G0050500 Salix brachista HOM05D005583 ORTHO05D006507 5.3e-101 373.2 1233 30.3
Lalb_Chr10g0093441 Lupinus albus HOM05D005583 ORTHO05D006507 9.0e-101 372.5 1081 32.5
Ca_14482_v3 Cicer arietinum L. HOM05D005583 ORTHO05D006507 7.6e-100 369.4 1049 32.4
MELO3C009939.2 Cucumis melo HOM05D005583 ORTHO05D006507 1.0e-99 369.0 1115 32.2
arahy.Tifrunner.gnm1.ann1.8IP107 Arachis hypogaea HOM05D005583 ORTHO05D006507 4.2e-98 363.6 1146 32.0
Sc06g0001630 Simmondsia chinensis HOM05D005583 ORTHO05D006507 5.5e-98 363.2 1047 32.1
Lj1g0019005 Lotus japonicus HOM05D005583 ORTHO05D006507 9.3e-98 362.5 1104 31.6
Sed0016811 Sechium edule HOM05D005583 ORTHO05D006507 9.3e-98 362.5 954 33.2
Sopen02g016780 Solanum pennellii HOM05D005583 ORTHO05D006507 2.1e-97 361.3 1066 32.3
HanXRQChr14g0450181 Helianthus annuus HOM05D005583 ORTHO05D006507 3.5e-97 360.5 1123 31.2
EL10Ac1g00599 Beta vulgaris HOM05D005583 ORTHO05D006507 7.9e-97 359.4 1024 32.3
Migut.H00145 Erythranthe guttata HOM05D005583 ORTHO05D006507 1.3e-96 358.6 944 33.5
MSTRG.3182 Avicennia marina HOM05D005583 ORTHO05D006507 1.8e-96 358.2 1137 32.0
Solyc02g067670.4 Solanum lycopersicum HOM05D005583 ORTHO05D006507 5.1e-96 356.7 1154 31.7
arahy.Tifrunner.gnm1.ann1.YT8U7M Arachis hypogaea HOM05D005583 ORTHO05D006507 1.5e-95 355.1 1141 31.5
A06p40700 Brassica napus HOM05D005583 ORTHO05D006507 4.3e-95 353.6 933 33.5
THA.LOC104825294 Tarenaya hassleriana HOM05D005583 ORTHO05D006507 1.3e-94 352.1 994 32.2
Peaxi162Scf00368g00115 Petunia axillaris HOM05D005583 ORTHO05D006507 3.7e-94 350.5 1173 29.8
BolC7t44234H Brassica oleracea HOM05D005583 ORTHO05D006507 1.8e-93 348.2 954 32.9
C07p37240 Brassica napus HOM05D005583 ORTHO05D006507 2.4e-93 347.8 925 33.1
BraA06t26991Z Brassica rapa HOM05D005583 ORTHO05D006507 3.1e-93 347.4 940 33.3
ECA238G4583 Erigeron canadensis HOM05D005583 ORTHO05D006507 5.3e-93 346.7 939 32.1
Rhsim10G0025300 Rhododendron simsii HOM05D005583 ORTHO05D006507 1.5e-92 345.1 1104 31.3
Eucgr.I01829 Eucalyptus grandis HOM05D005583 ORTHO05D006507 1.3e-91 342.0 1173 29.8
Aqoxy3G03052 Aquilegia oxysepala HOM05D005583 ORTHO05D006507 6.5e-91 339.7 1058 31.1
BcaC06g30938 Brassica carinata HOM05D005583 ORTHO05D006507 6.5e-91 339.7 1194 30.7
Gohir.A07G218700 Gossypium hirsutum HOM05D005583 ORTHO05D006507 1.4e-90 338.6 975 31.8
Sp2g17030 Schrenkiella parvula HOM05D005583 ORTHO05D006507 3.9e-88 330.5 1186 29.5
VMungo1383G3393 Vigna mungo HOM05D005583 ORTHO05D006507 8.7e-88 329.3 1096 30.4
Lsat_1_v5_gn_2_92580 Lactuca sativa HOM05D005583 ORTHO05D006507 1.1e-87 328.9 939 31.8
DCAR_011222 Daucus carota HOM05D005583 ORTHO05D006507 2.5e-87 327.8 1127 30.3
AL5G17540 Arabidopsis lyrata HOM05D005583 ORTHO05D006507 3.3e-87 327.4 1222 28.9
Aa31LG2G4780 Aethionema arabicum HOM05D005583 ORTHO05D006507 5.7e-87 326.6 981 30.5
PSO063G3250 Papaver somniferum HOM05D005583 ORTHO05D006507 1.6e-86 325.1 1018 30.7
PSO832G0708 Papaver somniferum HOM05D005583 ORTHO05D006507 1.1e-85 322.4 1039 30.8
Thhalv10003517m.g Eutrema salsugineum HOM05D005583 ORTHO05D006507 1.8e-85 321.6 1225 29.5
AT3G28030 Arabidopsis thaliana HOM05D005583 ORTHO05D006507 3.1e-85 320.9 1231 29.1
SalBow1G3935 Salvia bowleyana HOM05D005583 ORTHO05D006507 6.9e-85 319.7 1049 29.7
Hma1.2p1_0697F.1_g204860 Hydrangea macrophylla HOM05D005583 ORTHO05D006507 2.6e-84 317.8 856 33.3
vmacro05807 Vaccinium macrocarpon HOM05D005583 ORTHO05D006507 5.9e-84 316.6 1162 29.9
BcaC06g33760 Brassica carinata HOM05D005583 ORTHO05D006507 2.2e-83 314.7 954 31.2
CARHR149650 Cardamine hirsuta HOM05D005583 ORTHO05D006507 2.2e-83 314.7 982 30.1
Zm00001eb007570 Zea mays HOM05D005583 ORTHO05D006507 1.4e-82 312.0 1142 29.0
Os03g0205400 Oryza sativa ssp. japonica HOM05D005583 ORTHO05D006507 1.9e-82 311.6 1030 30.9
Carub.0005s0655 Capsella rubella HOM05D005583 ORTHO05D006507 1.8e-80 305.1 1230 29.1
CDE10G1103 Ceratophyllum demersum HOM05D005583 ORTHO05D006507 3.1e-77 294.3 977 29.4
AUR62035940 Chenopodium quinoa HOM05D005583 ORTHO05D006507 1.5e-76 292.0 1097 31.2
Thecc.04G006200 Theobroma cacao HOM05D005583 ORTHO05D006507 2.5e-74 284.6 399 48.6
ATR0629G036 Amborella trichopoda HOM05D005583 ORTHO05D006507 1.6e-73 282.0 1035 29.2
SEGI_39705 Sequoiadendron giganteum HOM05D005583 ORTHO05D006507 2.8e-70 271.2 1073 28.2
SGA_v2.0_scaffold135G34849 Striga asiatica HOM05D005583 ORTHO05D006507 8.0e-57 226.5 317 44.2
unitig_21.g20499 Utricularia gibba HOM05D005583 ORTHO05D006507 6.8e-56 223.4 966 29.3
Ah.10g033560 Amaranthus hybridus HOM05D005583 ORTHO05D006507 8.3e-54 216.5 1046 27.2
Phvul.008G152600 Phaseolus vulgaris HOM05D005583 ORTHO05D006507 6.5e-51 206.8 425 38.6
C07p37280 Brassica napus HOM05D005583 ORTHO05D006507 1.6e-49 202.2 164 64.6
Mapoly0177s0011 Marchantia polymorpha HOM05D005583 ORTHO05D006507 3.1e-45 188.0 235 44.3
AagrBONN_evm.TU.Sc2ySwM_228.1548 Anthoceros agrestis HOM05D005583 ORTHO05D006507 5.4e-45 187.2 222 47.3
Pp3c11_24040 Physcomitrium patens HOM05D005583 ORTHO05D006507 5.6e-42 177.2 236 41.1
HPP92_006939 Vanilla planifolia HOM05D005583 ORTHO05D006507 7.3e-42 176.8 523 33.8
CBR_g74695 Chara braunii HOM05D005583 ORTHO05D006507 1.2e-36 159.5 312 35.9
SHI22361 Sapria himalayana HOM05D005583 ORTHO05D006507 2.4e-29 135.2 151 48.3
Cre10.g429050 Chlamydomonas reinhardtii HOM05D005583 ORTHO05D006507 9.2e-29 133.3 195 36.9
PGR142G0990 Punica granatum HOM05D005583 ORTHO05D006507 2.1e-25 122.1 82 70.7
SHI22359 Sapria himalayana HOM05D005583 ORTHO05D006507 2.0e-23 115.5 378 32.5
HPP92_029122 Vanilla planifolia HOM05D005583 ORTHO05D006507 7.3e-18 97.1 56 85.7
MCO01G030 Micromonas commoda HOM05D005583 ORTHO05D006507 1.1e-16 93.2 208 32.7
Duzib264G0905 Durio zibethinus HOM05D005583 ORTHO05D006507 4.4e-15 87.8 150 41.3
TPR.G15717 Trifolium pratense HOM05D005583 ORTHO05D006507 2.9e-14 85.1 62 75.8
PRCOL_00006730 Prasinoderma coloniale HOM05D005583 ORTHO05D006507 2.5e-10 72.0 242 26.4
Cfa026862 Carpinus fangiana HOM05D005583 ORTHO05D006507 3.8e-06 58.2 188 28.2
SHI22363 Sapria himalayana HOM05D005583 ORTHO05D006507 8.4e-06 57.0 113 39.8


User provided reference genes

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