Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c37843 Carica papaya HOM05D005384 ORTHO05D006477 8.1e-126 453.8 229 100.0
RcHm_v2.0_Chr1g0329501 Rosa chinensis HOM05D005384 ORTHO05D006477 1.3e-54 217.2 153 66.0
Haze_14319 Corylus avellana HOM05D005384 ORTHO05D006477 4.8e-54 215.3 135 74.1
FAN10G2966 Fragaria x ananassa HOM05D005384 ORTHO05D006477 1.8e-53 213.4 153 63.4
CiPaw.03G076200 Carya illinoinensis HOM05D005384 ORTHO05D006477 5.4e-53 211.8 154 63.6
FAN03G3298 Fragaria x ananassa HOM05D005384 ORTHO05D006477 5.4e-53 211.8 153 63.4
Manes.02G081900 Manihot esculenta HOM05D005384 ORTHO05D006477 5.4e-53 211.8 149 67.1
FvH4_7g04410 Fragaria vesca HOM05D005384 ORTHO05D006477 7.0e-53 211.5 155 64.5
FAN06G1991 Fragaria x ananassa HOM05D005384 ORTHO05D006477 7.0e-53 211.5 155 64.5
FAN01G0265 Fragaria x ananassa HOM05D005384 ORTHO05D006477 1.0e-51 207.6 153 62.1
CANSAT25G0269 Cannabis sativa HOM05D005384 ORTHO05D006477 5.0e-51 205.3 154 63.0
MD00G1152000 Malus domestica HOM05D005384 ORTHO05D006477 5.5e-50 201.8 134 73.1
GSVIVG01013204001 Vitis vinifera HOM05D005384 ORTHO05D006477 9.5e-50 201.1 155 63.9
CSS0000239 Camellia sinensis var. sinensis HOM05D005384 ORTHO05D006477 3.6e-49 199.1 120 73.3
Ciclev10010959m.g Citrus clementina HOM05D005384 ORTHO05D006477 8.0e-49 198.0 149 63.8
Prupe.2G049800 Prunus persica HOM05D005384 ORTHO05D006477 1.8e-48 196.8 161 60.9
Dinv07851 Davidia involucrata HOM05D005384 ORTHO05D006477 4.0e-48 195.7 157 60.5
Sed0018353 Sechium edule HOM05D005384 ORTHO05D006477 2.6e-47 193.0 150 60.7
Thecc.04G058100 Theobroma cacao HOM05D005384 ORTHO05D006477 2.6e-47 193.0 151 66.9
MD02G1270000 Malus domestica HOM05D005384 ORTHO05D006477 4.4e-47 192.2 135 68.9
Sabra04G0054400 Salix brachista HOM05D005384 ORTHO05D006477 1.7e-46 190.3 151 63.6
arahy.Tifrunner.gnm1.ann1.EB4ABC Arachis hypogaea HOM05D005384 ORTHO05D006477 2.2e-46 189.9 163 56.4
Sabra17G0116500 Salix brachista HOM05D005384 ORTHO05D006477 1.1e-45 187.6 135 66.7
vmacro14142 Vaccinium macrocarpon HOM05D005384 ORTHO05D006477 1.1e-45 187.6 117 72.6
Sabra17G0115200 Salix brachista HOM05D005384 ORTHO05D006477 1.4e-45 187.2 155 60.6
Rhsim07G0122100 Rhododendron simsii HOM05D005384 ORTHO05D006477 3.2e-45 186.0 116 72.4
TPR.G28960 Trifolium pratense HOM05D005384 ORTHO05D006477 3.2e-45 186.0 135 63.7
Dinv05843 Davidia involucrata HOM05D005384 ORTHO05D006477 5.4e-45 185.3 120 70.8
Sabra17G0113100 Salix brachista HOM05D005384 ORTHO05D006477 7.0e-45 184.9 134 67.2
MELO3C025104.2 Cucumis melo HOM05D005384 ORTHO05D006477 1.2e-44 184.1 150 59.3
CsaV3_5G020310 Cucumis sativus L. HOM05D005384 ORTHO05D006477 1.2e-44 184.1 150 59.3
Medtr8g070990 Medicago truncatula HOM05D005384 ORTHO05D006477 2.7e-44 183.0 149 58.4
QL02p064091 Quercus lobata HOM05D005384 ORTHO05D006477 4.5e-44 182.2 154 59.1
ClCG01G008440 Citrullus lanatus HOM05D005384 ORTHO05D006477 5.9e-44 181.8 150 59.3
Glyma.08G266700 Glycine max HOM05D005384 ORTHO05D006477 5.9e-44 181.8 149 57.0
Gohir.D12G051100 Gossypium hirsutum HOM05D005384 ORTHO05D006477 5.9e-44 181.8 136 66.9
Gorai.008G054400 Gossypium raimondii HOM05D005384 ORTHO05D006477 5.9e-44 181.8 154 66.9
Atru.chr1.2109 Acer truncatum HOM05D005384 ORTHO05D006477 7.8e-44 181.4 149 60.4
arahy.Tifrunner.gnm1.ann1.R6E3N5 Arachis hypogaea HOM05D005384 ORTHO05D006477 1.3e-43 180.6 149 55.7
COL.COLO4_24446 Corchorus olitorius HOM05D005384 ORTHO05D006477 1.3e-43 180.6 124 70.2
Gohir.A12G052600 Gossypium hirsutum HOM05D005384 ORTHO05D006477 6.6e-43 178.3 154 66.2
Potri.004G081800 Populus trichocarpa HOM05D005384 ORTHO05D006477 6.6e-43 178.3 152 61.2
Potri.017G138500 Populus trichocarpa HOM05D005384 ORTHO05D006477 6.6e-43 178.3 115 73.0
TAR636G3654 Trochodendron aralioides HOM05D005384 ORTHO05D006477 1.1e-42 177.6 116 69.8
Glyma.16G102300 Glycine max HOM05D005384 ORTHO05D006477 2.8e-41 172.9 149 54.4
Actinidia10880 Actinidia chinensis HOM05D005384 ORTHO05D006477 3.6e-41 172.6 116 68.1
Duzib133G1182 Durio zibethinus HOM05D005384 ORTHO05D006477 4.7e-41 172.2 125 65.6
Lalb_Chr16g0391981 Lupinus albus HOM05D005384 ORTHO05D006477 8.0e-41 171.4 149 59.1
Nitab4.5_0009567g0040 Nicotiana tabacum HOM05D005384 ORTHO05D006477 1.0e-40 171.0 149 56.4
Lj3C397G6 Lonicera japonica HOM05D005384 ORTHO05D006477 1.8e-40 170.2 121 66.1
Lj4g0003244 Lotus japonicus HOM05D005384 ORTHO05D006477 1.5e-39 167.2 149 54.4
Actinidia22110 Actinidia chinensis HOM05D005384 ORTHO05D006477 4.4e-39 165.6 120 65.0
PGR042G2720 Punica granatum HOM05D005384 ORTHO05D006477 9.8e-39 164.5 155 53.5
TAR629G1600 Trochodendron aralioides HOM05D005384 ORTHO05D006477 2.9e-38 162.9 116 66.4
Aqoxy2G03702_Aqoxy2G03703 Aquilegia oxysepala HOM05D005384 ORTHO05D006477 4.9e-38 162.2 118 65.3
Cc04_g13050 Coffea canephora HOM05D005384 ORTHO05D006477 4.9e-38 162.2 151 55.0
Aqoxy3G02532 Aquilegia oxysepala HOM05D005384 ORTHO05D006477 2.4e-37 159.8 118 63.6
Migut.E00282 Erythranthe guttata HOM05D005384 ORTHO05D006477 2.0e-36 156.8 130 59.2
VMungo0251G2756 Vigna mungo HOM05D005384 ORTHO05D006477 2.0e-36 156.8 127 57.5
MSTRG.2272 Avicennia marina HOM05D005384 ORTHO05D006477 3.5e-36 156.0 106 70.8
CAN.G572.37 Capsicum annuum HOM05D005384 ORTHO05D006477 4.6e-36 155.6 108 66.7
Eucgr.J01644 Eucalyptus grandis HOM05D005384 ORTHO05D006477 1.0e-35 154.5 150 55.3
EL10Ac8g19736 Beta vulgaris HOM05D005384 ORTHO05D006477 1.3e-35 154.1 117 65.0
DCAR_016228 Daucus carota HOM05D005384 ORTHO05D006477 3.0e-35 152.9 154 50.6
AUR62027521 Chenopodium quinoa HOM05D005384 ORTHO05D006477 5.0e-35 152.1 117 65.8
Peaxi162Scf00084g00818 Petunia axillaris HOM05D005384 ORTHO05D006477 5.0e-35 152.1 127 57.5
Solyc08g077310.3 Solanum lycopersicum HOM05D005384 ORTHO05D006477 5.0e-35 152.1 109 64.2
Oeu024119.2 Olea europaea HOM05D005384 ORTHO05D006477 6.6e-35 151.8 132 57.6
Sopen08g025890 Solanum pennellii HOM05D005384 ORTHO05D006477 6.6e-35 151.8 109 64.2
ECA246G0264 Erigeron canadensis HOM05D005384 ORTHO05D006477 1.1e-34 151.0 133 54.9
CSS0046614 Camellia sinensis var. sinensis HOM05D005384 ORTHO05D006477 2.5e-34 149.8 93 71.0
Gohir.A08G038300 Gossypium hirsutum HOM05D005384 ORTHO05D006477 2.5e-34 149.8 149 53.7
Nitab4.5_0002055g0100 Nicotiana tabacum HOM05D005384 ORTHO05D006477 2.5e-34 149.8 125 56.8
Hund21526 Selenicereus undatus HOM05D005384 ORTHO05D006477 3.3e-34 149.4 102 68.6
AUR62030216 Chenopodium quinoa HOM05D005384 ORTHO05D006477 1.2e-33 147.5 134 57.5
SGA_v2.0_scaffold14G06795 Striga asiatica HOM05D005384 ORTHO05D006477 1.2e-33 147.5 107 64.5
PSO782G4681 Papaver somniferum HOM05D005384 ORTHO05D006477 1.1e-32 144.4 120 58.3
PSO063G3637 Papaver somniferum HOM05D005384 ORTHO05D006477 1.4e-32 144.1 119 58.8
Lsat_1_v5_gn_3_16520 Lactuca sativa HOM05D005384 ORTHO05D006477 4.0e-32 142.5 129 52.7
Gorai.004G048000 Gossypium raimondii HOM05D005384 ORTHO05D006477 1.2e-31 141.0 131 57.3
Oeu054547.2 Olea europaea HOM05D005384 ORTHO05D006477 2.2e-30 136.7 109 58.7
CDE12G0199 Ceratophyllum demersum HOM05D005384 ORTHO05D006477 3.5e-28 129.4 134 47.0
CDE06G0914 Ceratophyllum demersum HOM05D005384 ORTHO05D006477 2.3e-27 126.7 132 50.0
SEGI_21581 Sequoiadendron giganteum HOM05D005384 ORTHO05D006477 2.3e-27 126.7 120 57.5
Lalb_Chr05g0228951 Lupinus albus HOM05D005384 ORTHO05D006477 2.5e-26 123.2 112 50.0
Ah.14g086470 Amaranthus hybridus HOM05D005384 ORTHO05D006477 5.6e-26 122.1 117 53.8
THA.LOC104801042 Tarenaya hassleriana HOM05D005384 ORTHO05D006477 7.3e-26 121.7 151 49.0
unitig_21.g20863 Utricularia gibba HOM05D005384 ORTHO05D006477 3.6e-25 119.4 93 59.1
Phvul.003G273500 Phaseolus vulgaris HOM05D005384 ORTHO05D006477 1.8e-24 117.1 150 42.7
HanXRQChr17g0535751 Helianthus annuus HOM05D005384 ORTHO05D006477 5.4e-21 105.5 130 46.2
Zm00001eb361710 Zea mays HOM05D005384 ORTHO05D006477 5.4e-21 105.5 155 40.0
AL5G35270 Arabidopsis lyrata HOM05D005384 ORTHO05D006477 1.7e-19 100.5 132 46.2
Aa31LG10G6030 Aethionema arabicum HOM05D005384 ORTHO05D006477 5.1e-19 99.0 125 48.0
Carub.0005s2082 Capsella rubella HOM05D005384 ORTHO05D006477 3.3e-18 96.3 134 45.5
Thhalv10010093m.g Eutrema salsugineum HOM05D005384 ORTHO05D006477 7.3e-18 95.1 134 44.8
Zm00001eb306360 Zea mays HOM05D005384 ORTHO05D006477 3.6e-17 92.8 143 37.8
CARHR164150 Cardamine hirsuta HOM05D005384 ORTHO05D006477 5.2e-16 89.0 122 45.1
Lj2A247G82 Lonicera japonica HOM05D005384 ORTHO05D006477 5.2e-16 89.0 139 40.3
Sp5g08170 Schrenkiella parvula HOM05D005384 ORTHO05D006477 6.8e-16 88.6 134 43.3
Os02g0167500 Oryza sativa ssp. japonica HOM05D005384 ORTHO05D006477 7.6e-15 85.1 106 44.3
HPP92_022595 Vanilla planifolia HOM05D005384 ORTHO05D006477 2.9e-14 83.2 107 43.0
Mapoly0005s0121 Marchantia polymorpha HOM05D005384 ORTHO05D006477 1.1e-13 81.3 118 40.7
PSO063G4288 Papaver somniferum HOM05D002729 ORTHO05D305335 1.1e-13 81.3 157 33.1
PSO170G3342 Papaver somniferum HOM05D002729 ORTHO05D305508 7.1e-13 78.6 157 32.5
BcaNung06989 Brassica carinata HOM05D005384 ORTHO05D006477 8.7e-11 71.6 134 38.8
BolC8t50551H Brassica oleracea HOM05D005384 ORTHO05D006477 8.7e-11 71.6 134 38.8
BraA09t40184Z Brassica rapa HOM05D005384 ORTHO05D006477 1.3e-09 67.8 134 38.1
PSO170G6210 Papaver somniferum HOM05D005384 ORTHO05D006477 2.4e-08 63.5 87 40.2
ATR0743G115 Amborella trichopoda HOM05D005384 ORTHO05D006477 9.0e-08 61.6 89 41.6


User provided reference genes

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