Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G191400 Carya illinoinensis HOM05D003752 ORTHO05D004537 2.3e-243 845.5 561 100.0
Cfa017397 Carpinus fangiana HOM05D003752 ORTHO05D004537 1.4e-203 713.4 453 81.2
QL07p048095 Quercus lobata HOM05D003752 ORTHO05D004537 3.8e-201 705.3 453 79.9
Haze_02427 Corylus avellana HOM05D003752 ORTHO05D004537 1.2e-199 700.3 454 81.9
CANSAT78G1620 Cannabis sativa HOM05D003752 ORTHO05D004537 2.1e-191 672.9 452 77.2
TAR369G0444 Trochodendron aralioides HOM05D003752 ORTHO05D004537 1.5e-189 666.8 453 76.2
TAR625G1316 Trochodendron aralioides HOM05D003752 ORTHO05D004537 1.9e-189 666.4 453 75.9
TAR623G0355 Trochodendron aralioides HOM05D003752 ORTHO05D004537 5.7e-189 664.8 452 76.1
Manes.14G164400 Manihot esculenta HOM05D003752 ORTHO05D004537 1.3e-188 663.7 447 77.2
Manes.06G013600 Manihot esculenta HOM05D003752 ORTHO05D004537 1.6e-188 663.3 447 77.4
Sed0008799 Sechium edule HOM05D003752 ORTHO05D004537 1.1e-187 660.6 460 75.2
Dinv01586 Davidia involucrata HOM05D003752 ORTHO05D004537 3.1e-187 659.1 446 76.9
Dinv16988 Davidia involucrata HOM05D003752 ORTHO05D004537 3.1e-187 659.1 446 76.9
Dinv42937 Davidia involucrata HOM05D003752 ORTHO05D004537 3.1e-187 659.1 446 76.9
Dinv43163 Davidia involucrata HOM05D003752 ORTHO05D004537 3.1e-187 659.1 446 76.9
QL05p081022 Quercus lobata HOM05D003752 ORTHO05D004537 4.1e-187 658.7 446 76.9
THA.LOC104803283 Tarenaya hassleriana HOM05D003752 ORTHO05D004537 6.5e-185 651.4 454 74.2
Atru.chr1.1259 Acer truncatum HOM05D003752 ORTHO05D004537 8.5e-185 651.0 453 74.0
Sed0007232 Sechium edule HOM05D003752 ORTHO05D004537 8.5e-185 651.0 452 75.9
Gohir.A09G119600 Gossypium hirsutum HOM05D003752 ORTHO05D004537 1.9e-184 649.8 451 75.2
EL10Ac7g16005 Beta vulgaris HOM05D003752 ORTHO05D004537 2.5e-184 649.4 460 73.0
CANSAT11G0989 Cannabis sativa HOM05D003752 ORTHO05D004537 2.5e-184 649.4 454 75.8
Sabra16G0047400 Salix brachista HOM05D003752 ORTHO05D004537 2.5e-184 649.4 454 75.1
PGR042G2871 Punica granatum HOM05D003752 ORTHO05D004537 3.2e-184 649.0 452 75.7
PGR142G3112 Punica granatum HOM05D003752 ORTHO05D004537 5.5e-184 648.3 453 75.3
Dinv03595 Davidia involucrata HOM05D003752 ORTHO05D004537 7.2e-184 647.9 458 74.2
THA.LOC104824422 Tarenaya hassleriana HOM05D003752 ORTHO05D004537 3.6e-183 645.6 443 74.5
THA.LOC104816817 Tarenaya hassleriana HOM05D003752 ORTHO05D004537 4.6e-183 645.2 456 73.0
Duzib128G1024 Durio zibethinus HOM05D003752 ORTHO05D004537 7.9e-183 644.4 448 75.2
TWI74G0240 Tripterygium wilfordii HOM05D003752 ORTHO05D004537 1.0e-182 644.0 445 75.3
Nitab4.5_0003602g0040 Nicotiana tabacum HOM05D003752 ORTHO05D004537 1.8e-182 643.3 455 73.8
COL.COLO4_34258 Corchorus olitorius HOM05D003752 ORTHO05D004537 2.3e-182 642.9 446 75.1
Sabra16G0044000 Salix brachista HOM05D003752 ORTHO05D004537 2.3e-182 642.9 453 74.4
Oeu018008.1 Olea europaea HOM05D003752 ORTHO05D004537 3.0e-182 642.5 446 73.1
TWI53G1524 Tripterygium wilfordii HOM05D003752 ORTHO05D004537 3.9e-182 642.1 445 75.5
PSO339G1844 Papaver somniferum HOM05D003752 ORTHO05D004537 5.1e-182 641.7 451 74.5
PSO384G2115 Papaver somniferum HOM05D003752 ORTHO05D004537 5.1e-182 641.7 451 74.5
Thecc.05G143200 Theobroma cacao HOM05D003752 ORTHO05D004537 8.8e-182 641.0 448 75.4
Gohir.D09G115800 Gossypium hirsutum HOM05D003752 ORTHO05D004537 1.1e-181 640.6 451 74.5
Gorai.006G134100 Gossypium raimondii HOM05D003752 ORTHO05D004537 1.1e-181 640.6 451 74.5
MSTRG.6451 Avicennia marina HOM05D003752 ORTHO05D004537 2.6e-181 639.4 462 72.9
ECA238G3530 Erigeron canadensis HOM05D003752 ORTHO05D004537 5.7e-181 638.3 443 74.5
Potri.006G044100 Populus trichocarpa HOM05D003752 ORTHO05D004537 9.7e-181 637.5 451 74.1
Prupe.5G050000 Prunus persica HOM05D003752 ORTHO05D004537 9.7e-181 637.5 445 74.4
SGA_v2.0_scaffold69G23094 Striga asiatica HOM05D003752 ORTHO05D004537 9.7e-181 637.5 453 73.5
Potri.016G041200 Populus trichocarpa HOM05D003752 ORTHO05D004537 2.2e-180 636.3 451 74.9
Peaxi162Scf00036g00225 Petunia axillaris HOM05D003752 ORTHO05D004537 2.8e-180 636.0 445 73.9
MSTRG.26108 Avicennia marina HOM05D003752 ORTHO05D004537 3.7e-180 635.6 446 73.5
MSTRG.26109 Avicennia marina HOM05D003752 ORTHO05D004537 3.7e-180 635.6 446 73.5
MBI11_g44896_MAGBIO Magnolia biondii HOM05D003752 ORTHO05D004537 3.7e-180 635.6 449 73.1
Lj6g0020967 Lotus japonicus HOM05D003752 ORTHO05D004537 4.8e-180 635.2 442 74.4
MBI11_g33762_MAGBIO Magnolia biondii HOM05D003752 ORTHO05D004537 6.3e-180 634.8 449 73.3
Glyma.15G056100 Glycine max HOM05D003752 ORTHO05D004537 8.2e-180 634.4 411 77.6
CAN.G809.54 Capsicum annuum HOM05D003752 ORTHO05D004537 1.1e-179 634.0 446 73.8
Migut.J01786 Erythranthe guttata HOM05D003752 ORTHO05D004537 1.1e-179 634.0 439 75.2
arahy.Tifrunner.gnm1.ann1.VI8ZWX Arachis hypogaea HOM05D003752 ORTHO05D004537 1.4e-179 633.6 403 78.9
Carub.0005s2396 Capsella rubella HOM05D003752 ORTHO05D004537 1.4e-179 633.6 452 72.1
MELO3C002022.2 Cucumis melo HOM05D003752 ORTHO05D004537 1.4e-179 633.6 420 77.6
Oeu008124.1 Olea europaea HOM05D003752 ORTHO05D004537 1.4e-179 633.6 450 73.1
HanXRQChr14g0450101 Helianthus annuus HOM05D003752 ORTHO05D004537 1.8e-179 633.3 443 73.8
Lalb_Chr20g0122851 Lupinus albus HOM05D003752 ORTHO05D004537 1.8e-179 633.3 400 80.2
Phvul.006G203800 Phaseolus vulgaris HOM05D003752 ORTHO05D004537 6.9e-179 631.3 440 74.1
Lsat_1_v5_gn_2_87640 Lactuca sativa HOM05D003752 ORTHO05D004537 9.1e-179 630.9 450 73.3
vmacro03080 Vaccinium macrocarpon HOM05D003752 ORTHO05D004537 1.2e-178 630.6 416 77.9
CsaV3_1G005920 Cucumis sativus L. HOM05D003752 ORTHO05D004537 1.5e-178 630.2 425 76.2
Aqoxy2G02099 Aquilegia oxysepala HOM05D003752 ORTHO05D004537 2.0e-178 629.8 450 72.9
Glyma.08G176900 Glycine max HOM05D003752 ORTHO05D004537 2.0e-178 629.8 448 72.3
Duzib106G0564 Durio zibethinus HOM05D003752 ORTHO05D004537 2.6e-178 629.4 448 73.0
SGA_v2.0_scaffold105G30451 Striga asiatica HOM05D003752 ORTHO05D004537 3.4e-178 629.0 452 72.1
TPR.G21030 Trifolium pratense HOM05D003752 ORTHO05D004537 4.5e-178 628.6 402 78.4
DCAR_014174 Daucus carota HOM05D003752 ORTHO05D004537 5.9e-178 628.2 419 75.4
Prupe.1G572500 Prunus persica HOM05D003752 ORTHO05D004537 5.9e-178 628.2 409 77.5
SalBow6G1976 Salvia bowleyana HOM05D003752 ORTHO05D004537 7.7e-178 627.9 451 71.8
Sc09g0009000 Simmondsia chinensis HOM05D003752 ORTHO05D004537 7.7e-178 627.9 443 73.6
Sabra06G0030400 Salix brachista HOM05D003752 ORTHO05D004537 1.0e-177 627.5 404 79.0
ATR0582G074 Amborella trichopoda HOM05D003752 ORTHO05D004537 1.3e-177 627.1 437 73.2
Ciclev10004588m.g Citrus clementina HOM05D003752 ORTHO05D004537 1.7e-177 626.7 454 72.0
Nitab4.5_0003902g0040 Nicotiana tabacum HOM05D003752 ORTHO05D004537 1.7e-177 626.7 452 72.1
CARHR167330 Cardamine hirsuta HOM05D003752 ORTHO05D004537 2.9e-177 625.9 452 71.0
Nn3g18377 Nelumbo nucifera HOM05D003752 ORTHO05D004537 3.8e-177 625.5 507 67.5
Rhsim11G0022000 Rhododendron simsii HOM05D003752 ORTHO05D004537 6.5e-177 624.8 404 78.2
VMungo0540G0784 Vigna mungo HOM05D003752 ORTHO05D004537 8.5e-177 624.4 407 77.6
A07p23280 Brassica napus HOM05D003752 ORTHO05D004537 1.1e-176 624.0 419 74.9
MBI11_g39266_MAGBIO Magnolia biondii HOM05D003752 ORTHO05D004537 1.1e-176 624.0 413 76.5
BolC6t37580H Brassica oleracea HOM05D003752 ORTHO05D004537 1.4e-176 623.6 411 75.9
Lsat_1_v5_gn_4_170400 Lactuca sativa HOM05D003752 ORTHO05D004537 1.4e-176 623.6 443 73.4
BcaC08g44828 Brassica carinata HOM05D003752 ORTHO05D004537 1.9e-176 623.2 411 75.9
PGSC0003DMG400007315 Solanum tuberosum HOM05D003752 ORTHO05D004537 1.9e-176 623.2 450 72.0
C06p24280 Brassica napus HOM05D003752 ORTHO05D004537 3.2e-176 622.5 409 76.3
Oeu033774.1 Olea europaea HOM05D003752 ORTHO05D004537 3.2e-176 622.5 446 71.5
Solyc02g081810.4 Solanum lycopersicum HOM05D003752 ORTHO05D004537 3.2e-176 622.5 447 72.9
BraA07t29994Z Brassica rapa HOM05D003752 ORTHO05D004537 4.2e-176 622.1 419 74.7
ClCG04G011850 Citrullus lanatus HOM05D003752 ORTHO05D004537 4.2e-176 622.1 414 76.8
Aa31LG10G12050 Aethionema arabicum HOM05D003752 ORTHO05D004537 5.5e-176 621.7 454 69.8
Sopen02g026410 Solanum pennellii HOM05D003752 ORTHO05D004537 5.5e-176 621.7 444 72.7
AL5G38630 Arabidopsis lyrata HOM05D003752 ORTHO05D004537 9.4e-176 620.9 443 71.8
AT3G57150 Arabidopsis thaliana HOM05D003752 ORTHO05D004537 9.4e-176 620.9 445 71.2
MD06G1043100 Malus domestica HOM05D003752 ORTHO05D004537 9.4e-176 620.9 407 77.9
PSO339G6529 Papaver somniferum HOM05D003752 ORTHO05D004537 1.2e-175 620.5 416 75.5
MD16G1267700 Malus domestica HOM05D003752 ORTHO05D004537 2.7e-175 619.4 388 80.4
BcaB02g07617 Brassica carinata HOM05D003752 ORTHO05D004537 3.6e-175 619.0 403 76.7
RcHm_v2.0_Chr7g0207911 Rosa chinensis HOM05D003752 ORTHO05D004537 4.7e-175 618.6 408 77.5
Actinidia23948 Actinidia chinensis HOM05D003752 ORTHO05D004537 7.9e-175 617.8 404 77.7
ECA232G3218 Erigeron canadensis HOM05D003752 ORTHO05D004537 1.0e-174 617.5 443 72.5
BcaC03g16360 Brassica carinata HOM05D003752 ORTHO05D004537 1.8e-174 616.7 418 74.6
C02p41830 Brassica napus HOM05D003752 ORTHO05D004537 1.8e-174 616.7 418 74.6
BcaB05g23842 Brassica carinata HOM05D003752 ORTHO05D004537 2.3e-174 616.3 405 76.5
Medtr4g074160 Medicago truncatula HOM05D003752 ORTHO05D004537 2.3e-174 616.3 443 72.0
Ca_03047_v3 Cicer arietinum L. HOM05D003752 ORTHO05D004537 5.2e-174 615.1 408 75.7
SHI24589 Sapria himalayana HOM05D003752 ORTHO05D004537 2.6e-173 612.8 449 70.8
DCAR_020218 Daucus carota HOM05D003752 ORTHO05D004537 3.3e-173 612.5 450 70.4
A02p26300 Brassica napus HOM05D003752 ORTHO05D004537 5.7e-173 611.7 415 74.5
BraA02t07631Z Brassica rapa HOM05D003752 ORTHO05D004537 5.7e-173 611.7 415 74.5
Thhalv10028535m.g Eutrema salsugineum HOM05D003752 ORTHO05D004537 7.4e-173 611.3 408 74.5
Thhalv10029296m.g Eutrema salsugineum HOM05D003752 ORTHO05D004537 7.4e-173 611.3 408 74.5
FvH4_5g20900 Fragaria vesca HOM05D003752 ORTHO05D004537 7.4e-173 611.3 406 76.6
FAN08G2370 Fragaria x ananassa HOM05D003752 ORTHO05D004537 1.3e-172 610.5 397 77.6
FAN18G0564 Fragaria x ananassa HOM05D003752 ORTHO05D004537 1.3e-172 610.5 397 77.6
unitig_22.g6030 Utricularia gibba HOM05D003752 ORTHO05D004537 4.8e-172 608.6 461 70.1
HPP92_013499 Vanilla planifolia HOM05D003752 ORTHO05D004537 4.8e-172 608.6 408 75.5
HPP92_001952 Vanilla planifolia HOM05D003752 ORTHO05D004537 6.3e-172 608.2 413 73.8
FAN13G2688 Fragaria x ananassa HOM05D003752 ORTHO05D004537 1.8e-171 606.7 451 71.6
FAN04G1343 Fragaria x ananassa HOM05D003752 ORTHO05D004537 7.0e-171 604.7 397 76.8
Eucgr.E03348 Eucalyptus grandis HOM05D003752 ORTHO05D004537 2.0e-170 603.2 431 73.1
MD16G1267900 Malus domestica HOM05D003752 ORTHO05D004537 1.3e-169 600.5 385 79.0
Ah.01g021060 Amaranthus hybridus HOM05D003752 ORTHO05D004537 2.9e-169 599.4 446 69.7
CSS0049967 Camellia sinensis var. sinensis HOM05D003752 ORTHO05D004537 2.9e-169 599.4 447 70.9
SEGI_15035 Sequoiadendron giganteum HOM05D003752 ORTHO05D004537 1.9e-168 596.7 399 73.4
SEGI_22907 Sequoiadendron giganteum HOM05D003752 ORTHO05D004537 9.4e-168 594.3 407 72.5
SEGI_34651 Sequoiadendron giganteum HOM05D003752 ORTHO05D004537 9.4e-168 594.3 407 72.5
Psat7g173920 Pisum sativum HOM05D003752 ORTHO05D004537 2.7e-167 592.8 399 75.2
Os07g0636000 Oryza sativa ssp. japonica HOM05D003752 ORTHO05D004537 2.3e-166 589.7 437 67.7
Zm00001eb328640 Zea mays HOM05D003752 ORTHO05D004537 4.8e-164 582.0 438 67.8
Zm00001eb127780 Zea mays HOM05D003752 ORTHO05D004537 8.2e-164 581.3 430 68.6
Zm00001eb333520 Zea mays HOM05D003752 ORTHO05D004537 8.2e-164 581.3 404 71.3
CSS0033883 Camellia sinensis var. sinensis HOM05D003752 ORTHO05D004537 1.1e-163 580.9 416 73.3
Os03g0370500 Oryza sativa ssp. japonica HOM05D003752 ORTHO05D004537 1.8e-163 580.1 400 71.0
Mapoly0138s0004 Marchantia polymorpha HOM05D003752 ORTHO05D004537 3.8e-161 572.4 451 65.2
AUR62001800 Chenopodium quinoa HOM05D003752 ORTHO05D004537 4.7e-159 565.5 455 66.2
Pp3c22_190 Physcomitrium patens HOM05D003752 ORTHO05D004537 1.8e-158 563.5 416 68.3
Pp3c22_210 Physcomitrium patens HOM05D003752 ORTHO05D004537 1.8e-158 563.5 416 68.3
AUR62020969 Chenopodium quinoa HOM05D003752 ORTHO05D004537 1.7e-156 557.0 443 66.8
SMO356G0031 Selaginella moellendorffii HOM05D003752 ORTHO05D004537 2.2e-156 556.6 418 66.3
AagrBONN_evm.TU.Sc2ySwM_117.2275 Anthoceros agrestis HOM05D003752 ORTHO05D004537 8.3e-156 554.7 397 68.8
CBR_g3460 Chara braunii HOM05D003752 ORTHO05D004537 4.2e-152 542.3 418 65.3
CSS0045812 Camellia sinensis var. sinensis HOM05D003752 ORTHO05D004537 2.1e-151 540.0 447 65.5
CSS0047163 Camellia sinensis var. sinensis HOM05D003752 ORTHO05D004537 1.5e-149 533.9 425 68.2
Haze_20773 Corylus avellana HOM05D003752 ORTHO05D004537 3.5e-146 522.7 274 94.2
Lj2A1060T44 Lonicera japonica HOM05D003752 ORTHO05D004537 7.7e-146 521.5 460 62.4
GSVIVG01034188001 Vitis vinifera HOM05D003752 ORTHO05D004537 3.8e-145 519.2 415 68.9
Cc05_g03890 Coffea canephora HOM05D003752 ORTHO05D004537 8.6e-145 518.1 415 68.9
Cre03.g172950 Chlamydomonas reinhardtii HOM05D003752 ORTHO05D004537 8.0e-143 511.5 412 61.9
PRCOL_00003441 Prasinoderma coloniale HOM05D003752 ORTHO05D004537 1.7e-140 503.8 385 64.2
MCO13G432 Micromonas commoda HOM05D003752 ORTHO05D004537 3.7e-140 502.7 435 60.9
CDE02G1601 Ceratophyllum demersum HOM05D003752 ORTHO05D004537 4.9e-132 475.7 453 58.5
AUR62027298 Chenopodium quinoa HOM05D003752 ORTHO05D004537 6.0e-130 468.8 356 69.1
MBI11_g22235_MAGBIO Magnolia biondii HOM05D003752 ORTHO05D004537 1.1e-120 438.0 410 60.0
Cfa023391 Carpinus fangiana HOM05D003752 ORTHO05D004537 4.6e-106 389.4 380 52.6
Haze_26222 Corylus avellana HOM05D003752 ORTHO05D004537 1.3e-103 381.3 355 54.6
HanXRQChr16g0500001 Helianthus annuus HOM05D003752 ORTHO05D004537 1.4e-99 367.9 296 65.2
HPP92_026052 Vanilla planifolia HOM05D003752 ORTHO05D004537 4.0e-94 349.7 198 85.9
Lj1P155T24 Lonicera japonica HOM05D003752 ORTHO05D004537 5.5e-91 339.3 280 65.0
Lalb_Chr15g0090361 Lupinus albus HOM05D003752 ORTHO05D004537 4.9e-84 316.2 180 85.6
CSS0023462 Camellia sinensis var. sinensis HOM05D003752 ORTHO05D004537 1.7e-76 291.2 266 60.9
unitig_8.g3514 Utricularia gibba HOM05D003752 ORTHO05D004537 2.2e-76 290.8 267 60.3
unitig_8.g3515 Utricularia gibba HOM05D003752 ORTHO05D004537 2.0e-69 267.7 145 90.3
BolC2t10201H Brassica oleracea HOM05D003752 ORTHO05D004537 1.1e-62 245.4 141 86.5
Sp6g05120 Schrenkiella parvula HOM05D003752 ORTHO05D004537 1.7e-60 238.0 197 61.9
SpUn1622_0010 Schrenkiella parvula HOM05D003752 ORTHO05D004537 9.4e-59 232.3 196 60.7
Os04g0576300 Oryza sativa ssp. japonica HOM05D003752 ORTHO05D004537 4.5e-53 213.4 163 69.3
ATR0048G023 Amborella trichopoda HOM05D003752 ORTHO05D004537 7.2e-51 206.1 191 58.1
Os11g0598700 Oryza sativa ssp. japonica HOM05D003752 ORTHO05D004537 3.6e-50 203.8 163 67.5
VMungo1127G2230 Vigna mungo HOM05D003752 ORTHO05D004537 1.3e-36 158.7 85 85.9
Cpa.g.c44419 Carica papaya HOM05D003752 ORTHO05D004537 1.7e-36 158.3 93 80.6
Aqoxy427s001 Aquilegia oxysepala HOM05D003752 ORTHO05D004537 6.3e-31 139.8 112 67.0
Cpa.g.sc211.29 Carica papaya HOM05D003752 ORTHO05D004537 5.2e-25 120.2 99 65.7
BolC2t10206H Brassica oleracea HOM05D003752 ORTHO05D033805 1.6e-13 82.0 48 72.9
GSVIVG01017513001 Vitis vinifera HOM05D003752 ORTHO05D004537 1.3e-12 79.0 53 66.0
Prupe.3G100900 Prunus persica HOM05D003752 ORTHO05D033805 5.4e-06 57.0 27 88.9


User provided reference genes

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