Gene: ATR0048G023

General Information

Structural Information

  • Species Amborella trichopoda
  • Gene Identifier ATR0048G023
  • Transcript Identifier ATR0048G023.1
  • Gene Type Coding gene
  • Location AmTr_v1.0_scaffold00148 : 460991-462000 : negative

Gene Family Information

  • ID HOM05D003752
  • #Genes/#Species 183/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id evm_27.TU.AmTr_v1.0_scaffold00148.26.v1.0
  • pacid 31556763

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
IEA
InterProRNA processing
GO:0001522
IEA
InterPropseudouridine synthesis
GO:0009451
IEA
InterProRNA modification

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0009982
IEA
InterPropseudouridine synthase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004802 tRNA pseudouridine synthase B family
IPR020103 Pseudouridine synthase, catalytic domain superfamily
IPR012960 Dyskerin-like
IPR036974 PUA domain superfamily
IPR002501 Pseudouridine synthase II, N-terminal
Mapman id Description
17.1.1.2.2.1.1 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.pseudouridylation.H/ACA small nucleolar ribonucleoprotein (snoRNP) rRNA pseudouridylation complex.pseudouridine synthase component Nap57/CBF5