Gene: CSS0047163

General Information

Structural Information

  • Species Camellia sinensis var. sinensis
  • Gene Identifier CSS0047163
  • Transcript Identifier CSS0047163.1
  • Gene Type Coding gene
  • Location Chr4 : 144457244-144458989 : positive

Gene Family Information

  • ID HOM05D003752
  • #Genes/#Species 183/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid CSS0047163.1

Descriptions

  • Description PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Vitis vinifera]
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
IEA
InterProRNA processing
GO:0001522
IEA
InterPropseudouridine synthesis
GO:0009451
IEA
InterProRNA modification

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0009982
IEA
InterPropseudouridine synthase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT3G57150
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G57150
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT3G57150

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002501 Pseudouridine synthase II, N-terminal
IPR004521 Uncharacterised domain CHP00451
IPR036974 PUA domain superfamily
IPR015947 PUA-like superfamily
IPR004802 tRNA pseudouridine synthase B family
IPR020103 Pseudouridine synthase, catalytic domain superfamily
IPR012960 Dyskerin-like
IPR032819 tRNA pseudouridylate synthase B, C-terminal
IPR002478 PUA domain
Mapman id Description
17.1.1.2.2.1.1 Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.post-transcriptional rRNA modification.pseudouridylation.H/ACA small nucleolar ribonucleoprotein (snoRNP) rRNA pseudouridylation complex.pseudouridine synthase component Nap57/CBF5