Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa023617 Carpinus fangiana HOM05D001829 ORTHO05D123530 1.5e-258 896.0 557 100.0
unitig_8.g4545 Utricularia gibba HOM05D001829 ORTHO05D003548 2.9e-12 77.8 184 28.8
Nitab4.5_0000667g0010 Nicotiana tabacum HOM05D001829 ORTHO05D003548 5.0e-12 77.0 193 31.1
Nitab4.5_0022329g0010 Nicotiana tabacum HOM05D001829 ORTHO05D003548 5.0e-12 77.0 193 31.1
PSO170G5852 Papaver somniferum HOM05D001829 ORTHO05D003548 2.5e-11 74.7 186 31.2
Sed0001549 Sechium edule HOM05D001829 ORTHO05D003548 2.5e-11 74.7 196 28.6
PSO017G6510 Papaver somniferum HOM05D001829 ORTHO05D003548 4.2e-11 73.9 186 31.2
CBR_g36287 Chara braunii HOM05D001829 ORTHO05D003548 5.5e-11 73.6 186 28.5
MBI03_g01214_MAGBIO Magnolia biondii HOM05D001829 ORTHO05D003548 9.5e-11 72.8 176 30.1
Os04g0440100 Oryza sativa ssp. japonica HOM05D001829 ORTHO05D003548 9.5e-11 72.8 201 29.4
PGR042G1417 Punica granatum HOM05D001829 ORTHO05D003548 1.2e-10 72.4 195 29.7
CiPaw.03G018900 Carya illinoinensis HOM05D001829 ORTHO05D003548 2.1e-10 71.6 187 28.3
Ciclev10019695m.g Citrus clementina HOM05D001829 ORTHO05D003548 2.1e-10 71.6 198 29.8
Sc20g0003300 Simmondsia chinensis HOM05D001829 ORTHO05D003548 2.1e-10 71.6 192 29.2
Solyc01g103420.4 Solanum lycopersicum HOM05D001829 ORTHO05D003548 2.8e-10 71.2 191 29.8
Sopen01g045770 Solanum pennellii HOM05D001829 ORTHO05D003548 2.8e-10 71.2 191 29.8
MD15G1403800 Malus domestica HOM05D001829 ORTHO05D003548 3.6e-10 70.9 177 30.5
Medtr2g005600 Medicago truncatula HOM05D001829 ORTHO05D003548 4.7e-10 70.5 175 30.9
TAR381G0284 Trochodendron aralioides HOM05D001829 ORTHO05D003548 4.7e-10 70.5 196 29.6
Haze_10033 Corylus avellana HOM05D001829 ORTHO05D003548 8.0e-10 69.7 197 29.9
Glyma.04G257000 Glycine max HOM05D001829 ORTHO05D003548 8.0e-10 69.7 179 29.6
MD08G1216600 Malus domestica HOM05D001829 ORTHO05D003548 8.0e-10 69.7 176 29.5
Potri.003G005700 Populus trichocarpa HOM05D001829 ORTHO05D003548 8.0e-10 69.7 194 29.4
VMungo1080G1494 Vigna mungo HOM05D001829 ORTHO05D003548 8.0e-10 69.7 180 30.0
Actinidia26178 Actinidia chinensis HOM05D001829 ORTHO05D003548 1.0e-09 69.3 198 27.8
BcaB03g13685 Brassica carinata HOM05D001829 ORTHO05D003548 1.4e-09 68.9 202 28.2
Hma1.2p1_0633F.1_g192740 Hydrangea macrophylla HOM05D001829 ORTHO05D003548 1.8e-09 68.6 177 29.4
Sed0004336 Sechium edule HOM05D001829 ORTHO05D003548 1.8e-09 68.6 186 28.5
SEGI_14492 Sequoiadendron giganteum HOM05D001829 ORTHO05D003548 1.8e-09 68.6 197 27.9
TWI59G0266 Tripterygium wilfordii HOM05D001829 ORTHO05D003548 1.8e-09 68.6 190 27.9
BolC5t32519H Brassica oleracea HOM05D001829 ORTHO05D003548 2.3e-09 68.2 199 28.1
ECA236G4953 Erigeron canadensis HOM05D001829 ORTHO05D003548 2.3e-09 68.2 174 27.6
Lalb_Chr18g0061071 Lupinus albus HOM05D001829 ORTHO05D003548 2.3e-09 68.2 190 29.5
QL02p100929 Quercus lobata HOM05D001829 ORTHO05D003548 2.3e-09 68.2 198 28.8
Ca_00041_v3 Cicer arietinum L. HOM05D001829 ORTHO05D003548 3.0e-09 67.8 192 28.1
Migut.B00752 Erythranthe guttata HOM05D001829 ORTHO05D003548 4.0e-09 67.4 183 27.9
Phvul.005G000800 Phaseolus vulgaris HOM05D001829 ORTHO05D003548 4.0e-09 67.4 179 29.1
ATR1136G031 Amborella trichopoda HOM05D001829 ORTHO05D003548 5.2e-09 67.0 192 28.6
AT1G33980 Arabidopsis thaliana HOM05D001829 ORTHO05D003548 5.2e-09 67.0 198 28.8
Lsat_1_v5_gn_7_76760 Lactuca sativa HOM05D001829 ORTHO05D003548 5.2e-09 67.0 177 28.8
AL1G48420 Arabidopsis lyrata HOM05D001829 ORTHO05D003548 6.8e-09 66.6 189 28.6
BcaC05g27789 Brassica carinata HOM05D001829 ORTHO05D003548 6.8e-09 66.6 199 27.6
A05p24170 Brassica napus HOM05D001829 ORTHO05D003548 6.8e-09 66.6 199 28.1
C05p37840 Brassica napus HOM05D001829 ORTHO05D003548 6.8e-09 66.6 199 27.6
BraA05t21296Z Brassica rapa HOM05D001829 ORTHO05D003548 6.8e-09 66.6 199 28.1
Carub.0001s3206 Capsella rubella HOM05D001829 ORTHO05D003548 6.8e-09 66.6 196 28.6
CiPaw.06G175000 Carya illinoinensis HOM05D001829 ORTHO05D003548 6.8e-09 66.6 176 27.3
Cc02_g23320 Coffea canephora HOM05D001829 ORTHO05D003548 6.8e-09 66.6 192 27.1
Prupe.1G581100 Prunus persica HOM05D001829 ORTHO05D003548 6.8e-09 66.6 194 28.9
RcHm_v2.0_Chr7g0229091 Rosa chinensis HOM05D001829 ORTHO05D003548 6.8e-09 66.6 180 27.8
SalBow7G4033 Salvia bowleyana HOM05D001829 ORTHO05D003548 6.8e-09 66.6 181 28.2
SEGI_13151 Sequoiadendron giganteum HOM05D001829 ORTHO05D003548 6.8e-09 66.6 184 26.6
Aqoxy5G00852 Aquilegia oxysepala HOM05D001829 ORTHO05D003548 8.8e-09 66.2 189 28.0
COL.COLO4_17710 Corchorus olitorius HOM05D001829 ORTHO05D003548 8.8e-09 66.2 194 27.3
FvH4_5g32510 Fragaria vesca HOM05D001829 ORTHO05D003548 8.8e-09 66.2 176 28.4
Lalb_Chr15g0090791 Lupinus albus HOM05D001829 ORTHO05D003548 8.8e-09 66.2 204 28.9
AUR62022364 Chenopodium quinoa HOM05D001829 ORTHO05D003548 1.2e-08 65.9 196 27.6
MD15G1438000 Malus domestica HOM05D001829 ORTHO05D003548 1.2e-08 65.9 194 29.4
Peaxi162Scf00011g01537 Petunia axillaris HOM05D001829 ORTHO05D003548 1.2e-08 65.9 190 28.4
Hund17550 Selenicereus undatus HOM05D001829 ORTHO05D003548 1.2e-08 65.9 197 27.4
Thecc.02G016800 Theobroma cacao HOM05D001829 ORTHO05D003548 1.2e-08 65.9 182 27.5
arahy.Tifrunner.gnm1.ann1.UF24CP Arachis hypogaea HOM05D001829 ORTHO05D003548 1.5e-08 65.5 198 29.3
Thhalv10007455m.g Eutrema salsugineum HOM05D001829 ORTHO05D003548 1.5e-08 65.5 175 28.6
Prupe.1G550000 Prunus persica HOM05D001829 ORTHO05D003548 1.5e-08 65.5 175 27.4
unitig_578.g15958 Utricularia gibba HOM05D001829 ORTHO05D003548 1.5e-08 65.5 161 28.6
CAN.G855.15 Capsicum annuum HOM05D001829 ORTHO05D003548 2.0e-08 65.1 191 27.7
Dinv19424 Davidia involucrata HOM05D001829 ORTHO05D003548 2.0e-08 65.1 177 28.2
Eucgr.I02778 Eucalyptus grandis HOM05D001829 ORTHO05D003548 2.0e-08 65.1 193 26.9
Gohir.A12G044600 Gossypium hirsutum HOM05D001829 ORTHO05D003548 2.0e-08 65.1 194 26.8
arahy.Tifrunner.gnm1.ann1.AXP3WA Arachis hypogaea HOM05D001829 ORTHO05D003548 2.6e-08 64.7 205 27.8
BcaC08g43827 Brassica carinata HOM05D001829 ORTHO05D003548 2.6e-08 64.7 196 28.6
A08p08420 Brassica napus HOM05D001829 ORTHO05D003548 2.6e-08 64.7 203 27.6
C06p12110 Brassica napus HOM05D001829 ORTHO05D003548 2.6e-08 64.7 196 28.6
BolC6t36349H Brassica oleracea HOM05D001829 ORTHO05D003548 2.6e-08 64.7 196 28.6
CiPaw.05G003800 Carya illinoinensis HOM05D001829 ORTHO05D003548 2.6e-08 64.7 202 26.7
Gohir.D12G043600 Gossypium hirsutum HOM05D001829 ORTHO05D003548 2.6e-08 64.7 194 26.8
Gorai.008G045900 Gossypium raimondii HOM05D001829 ORTHO05D003548 2.6e-08 64.7 194 26.8
Nitab4.5_0000787g0020 Nicotiana tabacum HOM05D001829 ORTHO05D003548 2.6e-08 64.7 202 27.2
Sopen10g009260 Solanum pennellii HOM05D001829 ORTHO05D003548 2.6e-08 64.7 192 28.1
arahy.Tifrunner.gnm1.ann1.1V6YFN Arachis hypogaea HOM05D001829 ORTHO05D003548 3.4e-08 64.3 205 27.8
Psat1g000720 Pisum sativum HOM05D001829 ORTHO05D003548 3.4e-08 64.3 179 27.9
SGA_v2.0_scaffold42G15901 Striga asiatica HOM05D001829 ORTHO05D003548 3.4e-08 64.3 195 27.2
THA.LOC104815973 Tarenaya hassleriana HOM05D001829 ORTHO05D003548 3.4e-08 64.3 198 26.8
Atru.chr6.543 Acer truncatum HOM05D001829 ORTHO05D003548 4.4e-08 63.9 205 27.8
Glyma.06G324500 Glycine max HOM05D001829 ORTHO05D003548 4.4e-08 63.9 185 28.1
MD08G1243800 Malus domestica HOM05D001829 ORTHO05D003548 4.4e-08 63.9 194 28.9
Nn5g27503 Nelumbo nucifera HOM05D001829 ORTHO05D003548 4.4e-08 63.9 196 28.1
Psat1g222920 Pisum sativum HOM05D001829 ORTHO05D003548 4.4e-08 63.9 203 28.1
Potri.004G225800 Populus trichocarpa HOM05D001829 ORTHO05D003548 4.4e-08 63.9 194 27.3
Solyc10g044450.3 Solanum lycopersicum HOM05D001829 ORTHO05D003548 4.4e-08 63.9 181 28.2
TAR628G0621 Trochodendron aralioides HOM05D001829 ORTHO05D003548 4.4e-08 63.9 194 27.8
AUR62034338 Chenopodium quinoa HOM05D001829 ORTHO05D003548 5.7e-08 63.5 196 26.5
HanXRQChr06g0182771 Helianthus annuus HOM05D001829 ORTHO05D003548 5.7e-08 63.5 182 26.9
Nitab4.5_0005169g0060 Nicotiana tabacum HOM05D001829 ORTHO05D003548 5.7e-08 63.5 201 26.4
Sabra03G0002900 Salix brachista HOM05D001829 ORTHO05D007093 5.7e-08 63.5 194 27.3
Glyma.16G002300 Glycine max HOM05D001829 ORTHO05D003548 7.5e-08 63.2 198 28.8
Ah.05g168630 Amaranthus hybridus HOM05D001829 ORTHO05D001489 9.8e-08 62.8 177 27.1
CDE05G1946 Ceratophyllum demersum HOM05D001829 ORTHO05D003548 9.8e-08 62.8 196 27.6
Sp1g29240 Schrenkiella parvula HOM05D001829 ORTHO05D003548 9.8e-08 62.8 196 28.1
TPR.G29252 Trifolium pratense HOM05D001829 ORTHO05D003548 9.8e-08 62.8 197 27.4
vmacro01706 Vaccinium macrocarpon HOM05D001829 ORTHO05D003548 9.8e-08 62.8 177 27.1
Dinv29604 Davidia involucrata HOM05D001829 ORTHO05D003548 1.3e-07 62.4 193 28.0
Hma1.2p1_0884F.1_g232370 Hydrangea macrophylla HOM05D001829 ORTHO05D003548 1.3e-07 62.4 194 27.8
TPR.G25505 Trifolium pratense HOM05D001829 ORTHO05D003548 1.3e-07 62.4 199 27.6
AagrBONN_evm.TU.Sc2ySwM_228.4400 Anthoceros agrestis HOM05D001829 ORTHO05D003548 1.7e-07 62.0 196 28.1
BcaB04g17913 Brassica carinata HOM05D001829 ORTHO05D003548 1.7e-07 62.0 203 27.1
Duzib248G0405 Durio zibethinus HOM05D001829 ORTHO05D003548 1.7e-07 62.0 194 27.3
Phvul.006G219800 Phaseolus vulgaris HOM05D001829 ORTHO05D003548 1.7e-07 62.0 198 27.8
Actinidia38991 Actinidia chinensis HOM05D001829 ORTHO05D003548 2.2e-07 61.6 213 26.3
EL10Ac1g01660 Beta vulgaris HOM05D001829 ORTHO05D003548 2.2e-07 61.6 179 25.1
Lj6g0013339 Lotus japonicus HOM05D001829 ORTHO05D003548 2.2e-07 61.6 193 30.1
TWI14G0679 Tripterygium wilfordii HOM05D001829 ORTHO05D003548 2.2e-07 61.6 186 27.4
Ciclev10000901m.g Citrus clementina HOM05D001829 ORTHO05D003548 2.8e-07 61.2 176 26.1
HanXRQChr09g0249081 Helianthus annuus HOM05D001829 ORTHO05D003548 2.8e-07 61.2 176 26.7
Lsat_1_v5_gn_9_119700 Lactuca sativa HOM05D001829 ORTHO05D003548 2.8e-07 61.2 176 27.3
Zm00001eb082220 Zea mays HOM05D001829 ORTHO05D003548 2.8e-07 61.2 197 25.9
THA.LOC104806760 Tarenaya hassleriana HOM05D001829 ORTHO05D003548 3.7e-07 60.8 198 26.3
VMungo0540G0490 Vigna mungo HOM05D001829 ORTHO05D003548 3.7e-07 60.8 182 29.1
Aa31LG6G8200 Aethionema arabicum HOM05D001829 ORTHO05D003548 4.9e-07 60.5 199 26.6
COL.COLO4_30473 Corchorus olitorius HOM05D001829 ORTHO05D003548 4.9e-07 60.5 197 28.9
Mapoly0005s0048 Marchantia polymorpha HOM05D001829 ORTHO05D003548 4.9e-07 60.5 201 25.9
Zm00001eb422950 Zea mays HOM05D001829 ORTHO05D003548 4.9e-07 60.5 181 26.5
Actinidia00172 Actinidia chinensis HOM05D001829 ORTHO05D003548 6.3e-07 60.1 177 27.1
CANSAT54G1136 Cannabis sativa HOM05D001829 ORTHO05D003548 6.3e-07 60.1 200 28.0
Manes.07G025700 Manihot esculenta HOM05D001829 ORTHO05D003548 6.3e-07 60.1 181 26.5
Sabra01G0171500 Salix brachista HOM05D001829 ORTHO05D003548 6.3e-07 60.1 194 26.8
CDE05G3483 Ceratophyllum demersum HOM05D001829 ORTHO05D003548 8.3e-07 59.7 196 26.5
Lj9A298T75 Lonicera japonica HOM05D001829 ORTHO05D003548 8.3e-07 59.7 177 25.4
Peaxi162Scf00152g01538 Petunia axillaris HOM05D001829 ORTHO05D003548 8.3e-07 59.7 181 26.0
HanXRQChr03g0067961 Helianthus annuus HOM05D001829 ORTHO05D003548 1.1e-06 59.3 176 26.7
Pp3c12_4230 Physcomitrium patens HOM05D001829 ORTHO05D003548 1.1e-06 59.3 210 26.7
SHI42179 Sapria himalayana HOM05D001829 ORTHO05D003548 1.1e-06 59.3 176 30.1
Migut.N00848 Erythranthe guttata HOM05D001829 ORTHO05D003548 1.4e-06 58.9 192 25.5
Pp3c4_15540 Physcomitrium patens HOM05D001829 ORTHO05D003548 1.4e-06 58.9 190 27.4
Cre12.g488100 Chlamydomonas reinhardtii HOM05D001829 ORTHO05D003548 1.8e-06 58.5 141 27.0
DCAR_029162 Daucus carota HOM05D001829 ORTHO05D003548 3.1e-06 57.8 203 26.6
Lj5C270G4 Lonicera japonica HOM05D001829 ORTHO05D001339 3.1e-06 57.8 175 26.3
TPR.G20672 Trifolium pratense HOM05D001829 ORTHO05D003548 4.1e-06 57.4 209 25.8
GSVIVG01023232001 Vitis vinifera HOM05D001829 ORTHO05D003548 4.1e-06 57.4 198 26.3
Medtr3g005510 Medicago truncatula HOM05D001829 ORTHO05D003548 5.4e-06 57.0 199 25.1
Oeu043625.3 Olea europaea HOM05D001829 ORTHO05D003548 5.4e-06 57.0 217 27.2


User provided reference genes

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