Gene: CiPaw.05G003800

General Information

Structural Information

  • Species Carya illinoinensis
  • Gene Identifier CiPaw.05G003800
  • Transcript Identifier CiPaw.05G003800.1
  • Gene Type Coding gene
  • Location Chr05 : 726378-733145 : positive

Gene Family Information

  • ID HOM05D001829
  • #Genes/#Species 358/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id CiPaw.05G003800.v1.1
  • pacid 45809895
  • locus Caril.05G003700

Descriptions

  • Description K14328 - regulator of nonsense transcripts 3 (UPF3, RENT3)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000184
IEA
InterPronuclear-transcribed mRNA catabolic process, nonsense-mediated decay

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005120 UPF3 domain
IPR035979 RNA-binding domain superfamily
IPR039722 Nonsense-mediated mRNA decay protein 3
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Mapman id Description
17.3.2.5 Protein biosynthesis.mRNA quality control.NMD Nonsense-Mediated Decay.co-effector protein (UPF3)