Gene: vmacro01706
General Information
Structural Information
- Species Vaccinium macrocarpon
- Gene Identifier vmacro01706
- Transcript Identifier vmacro01706-RA
- Gene Type Coding gene
- Location chr1_Vaccinium_macrocarpon_Stevens_v1 : 8970140-8976818 : negative
Gene Family Information
- ID HOM05D001829
- #Genes/#Species 358/100
- Phylogenetic origin
- ID ORTHO05D003548
- #Genes/#Species 216/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- id vmacro01706_Vaccinium_macrocarpon_Stevens_v1
Descriptions
- Description Similar to UPF3: Regulator of nonsense transcripts UPF3 (Arabidopsis thaliana OX=3702)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000184 | IEA | InterPro | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 17.3.2.5 | Protein biosynthesis.mRNA quality control.NMD Nonsense-Mediated Decay.co-effector protein (UPF3) |