Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc10_g16460 Coffea canephora HOM05D004842 ORTHO05D005929 3.9e-245 851.3 515 100.0
CSS0028462 Camellia sinensis var. sinensis HOM05D004842 ORTHO05D005929 3.1e-234 815.1 513 94.0
Dinv33198 Davidia involucrata HOM05D004842 ORTHO05D005929 9.1e-234 813.5 513 94.2
Lj9C410G7 Lonicera japonica HOM05D004842 ORTHO05D005929 2.5e-231 805.4 513 94.2
GSVIVG01007685001 Vitis vinifera HOM05D004842 ORTHO05D005929 3.2e-231 805.1 515 93.2
Hma1.2p1_0150F.1_g066770 Hydrangea macrophylla HOM05D004842 ORTHO05D005929 4.2e-231 804.7 513 88.3
PGSC0003DMG400005186 Solanum tuberosum HOM05D004842 ORTHO05D005929 1.2e-230 803.1 515 92.0
Actinidia01552 Actinidia chinensis HOM05D004842 ORTHO05D005929 2.1e-230 802.4 513 92.6
Sopen06g023340 Solanum pennellii HOM05D004842 ORTHO05D005929 2.1e-230 802.4 515 92.0
Nn1g01353 Nelumbo nucifera HOM05D004842 ORTHO05D005929 6.1e-230 800.8 513 93.0
Solyc06g064830.3 Solanum lycopersicum HOM05D004842 ORTHO05D005929 6.1e-230 800.8 515 91.8
Hund07225 Selenicereus undatus HOM05D004842 ORTHO05D005929 2.6e-228 795.4 513 93.0
CDE03G0432 Ceratophyllum demersum HOM05D004842 ORTHO05D005929 5.7e-228 794.3 513 92.0
MSTRG.1576 Avicennia marina HOM05D004842 ORTHO05D005929 1.7e-227 792.7 515 91.1
TAR374G0778 Trochodendron aralioides HOM05D004842 ORTHO05D005929 1.7e-227 792.7 513 90.6
DCAR_005757 Daucus carota HOM05D004842 ORTHO05D005929 4.8e-227 791.2 513 92.2
CDE04G2825 Ceratophyllum demersum HOM05D004842 ORTHO05D005929 6.3e-227 790.8 513 91.8
Aqoxy7G00451 Aquilegia oxysepala HOM05D004842 ORTHO05D005929 1.1e-226 790.0 511 92.0
Phvul.002G251300 Phaseolus vulgaris HOM05D004842 ORTHO05D005929 1.1e-226 790.0 513 92.0
AUR62006879 Chenopodium quinoa HOM05D004842 ORTHO05D005929 1.4e-226 789.6 513 87.1
HanXRQChr15g0492161 Helianthus annuus HOM05D004842 ORTHO05D005929 1.8e-226 789.3 513 90.1
Glyma.08G128700 Glycine max HOM05D004842 ORTHO05D005929 3.1e-226 788.5 513 92.0
CANSAT25G2510 Cannabis sativa HOM05D004842 ORTHO05D005929 5.3e-226 787.7 513 90.6
Cfa008117 Carpinus fangiana HOM05D004842 ORTHO05D005929 5.3e-226 787.7 513 91.2
CiPaw.03G017600 Carya illinoinensis HOM05D004842 ORTHO05D005929 7.0e-226 787.3 513 92.0
Ca_21945_v3 Cicer arietinum L. HOM05D004842 ORTHO05D005929 9.1e-226 786.9 513 92.0
HanXRQChr04g0123031 Helianthus annuus HOM05D004842 ORTHO05D005929 2.0e-225 785.8 513 90.1
CsaV3_2G033060 Cucumis sativus L. HOM05D004842 ORTHO05D005929 3.4e-225 785.0 513 86.7
Lsat_1_v5_gn_0_10701 Lactuca sativa HOM05D004842 ORTHO05D005929 3.4e-225 785.0 513 91.2
Nitab4.5_0006477g0030 Nicotiana tabacum HOM05D004842 ORTHO05D005929 4.5e-225 784.6 504 92.9
Cpa.g.sc20.22 Carica papaya HOM05D004842 ORTHO05D005929 5.9e-225 784.3 512 90.0
MSTRG.25488 Avicennia marina HOM05D004842 ORTHO05D005929 7.7e-225 783.9 515 91.8
Lalb_Chr11g0075451 Lupinus albus HOM05D004842 ORTHO05D005929 1.7e-224 782.7 515 91.1
Atru.chr13.2273 Acer truncatum HOM05D004842 ORTHO05D005929 5.0e-224 781.2 512 91.6
Eucgr.E01768 Eucalyptus grandis HOM05D004842 ORTHO05D005929 8.5e-224 780.4 514 91.8
PGR031G3502 Punica granatum HOM05D004842 ORTHO05D005929 8.5e-224 780.4 514 86.2
SalBow8G3404 Salvia bowleyana HOM05D004842 ORTHO05D005929 8.5e-224 780.4 538 87.9
Potri.011G156900 Populus trichocarpa HOM05D004842 ORTHO05D005929 1.1e-223 780.0 511 90.4
Migut.C01340 Erythranthe guttata HOM05D004842 ORTHO05D005929 1.4e-223 779.6 515 91.5
ECA232G0634 Erigeron canadensis HOM05D004842 ORTHO05D005929 1.9e-223 779.2 513 89.1
Gohir.A13G118200 Gossypium hirsutum HOM05D004842 ORTHO05D005929 1.9e-223 779.2 510 87.8
Gohir.D13G122000 Gossypium hirsutum HOM05D004842 ORTHO05D005929 1.9e-223 779.2 510 90.8
Gorai.013G136700 Gossypium raimondii HOM05D004842 ORTHO05D005929 1.9e-223 779.2 510 91.2
MD08G1215900 Malus domestica HOM05D004842 ORTHO05D005929 2.5e-223 778.9 513 89.3
Sabra11G0143100 Salix brachista HOM05D004842 ORTHO05D005929 2.5e-223 778.9 511 90.4
Duzib177G0537 Durio zibethinus HOM05D004842 ORTHO05D005929 4.2e-223 778.1 510 87.1
Lj6g0012354 Lotus japonicus HOM05D004842 ORTHO05D005929 4.2e-223 778.1 513 90.8
TWI14G0987 Tripterygium wilfordii HOM05D004842 ORTHO05D005929 4.2e-223 778.1 512 91.2
Thecc.08G195800 Theobroma cacao HOM05D004842 ORTHO05D005929 5.5e-223 777.7 510 87.1
Psat5g178560 Pisum sativum HOM05D004842 ORTHO05D005929 9.4e-223 776.9 513 91.0
HPP92_002632 Vanilla planifolia HOM05D004842 ORTHO05D005929 1.6e-222 776.2 513 89.9
Medtr3g052220 Medicago truncatula HOM05D004842 ORTHO05D005929 8.0e-222 773.9 513 88.7
VMungo0251G2201 Vigna mungo HOM05D004842 ORTHO05D005929 8.0e-222 773.9 504 91.7
ATR0757G167 Amborella trichopoda HOM05D004842 ORTHO05D005929 1.4e-221 773.1 513 91.0
Sed0014706 Sechium edule HOM05D004842 ORTHO05D005929 1.8e-221 772.7 513 86.2
ClCG11G008790 Citrullus lanatus HOM05D004842 ORTHO05D005929 3.0e-221 771.9 509 85.7
SGA_v2.0_scaffold24G10617 Striga asiatica HOM05D004842 ORTHO05D005929 3.9e-221 771.5 527 80.1
SGA_v2.0_scaffold118G32576 Striga asiatica HOM05D004842 ORTHO05D005929 8.8e-221 770.4 504 91.5
THA.LOC104813908 Tarenaya hassleriana HOM05D004842 ORTHO05D005929 1.1e-220 770.0 512 90.6
PSO478G2485 Papaver somniferum HOM05D004842 ORTHO05D005929 3.3e-220 768.5 513 90.1
PSO782G1233 Papaver somniferum HOM05D004842 ORTHO05D005929 4.4e-220 768.1 513 89.9
Prupe.1G547900 Prunus persica HOM05D004842 ORTHO05D005929 4.4e-220 768.1 513 88.9
Glyma.05G170500 Glycine max HOM05D004842 ORTHO05D005929 5.7e-220 767.7 513 90.8
Rhsim12G0003800 Rhododendron simsii HOM05D004842 ORTHO05D005929 1.3e-219 766.5 504 88.7
Os01g0322800 Oryza sativa ssp. japonica HOM05D004842 ORTHO05D005929 1.7e-219 766.1 514 88.1
Thhalv10018372m.g Eutrema salsugineum HOM05D004842 ORTHO05D005929 1.8e-218 762.7 515 87.4
Aa31LG7G3010 Aethionema arabicum HOM05D004842 ORTHO05D005929 2.4e-218 762.3 511 89.6
Ciclev10010841m.g Citrus clementina HOM05D004842 ORTHO05D005929 2.4e-218 762.3 512 91.0
COL.COLO4_26800 Corchorus olitorius HOM05D004842 ORTHO05D005929 1.2e-217 760.0 535 83.0
MD15G1400300 Malus domestica HOM05D004842 ORTHO05D005929 7.7e-217 757.3 513 89.7
Sp5g28910 Schrenkiella parvula HOM05D004842 ORTHO05D005929 7.7e-217 757.3 511 84.3
SHI07326 Sapria himalayana HOM05D004842 ORTHO05D005929 6.5e-216 754.2 515 87.6
FvH4_5g32860 Fragaria vesca HOM05D004842 ORTHO05D005929 3.2e-215 751.9 513 84.6
FAN18G3613 Fragaria x ananassa HOM05D004842 ORTHO05D005929 3.2e-215 751.9 513 84.6
QL09p004408 Quercus lobata HOM05D004842 ORTHO05D005929 4.2e-215 751.5 512 83.8
RcHm_v2.0_Chr7g0230731 Rosa chinensis HOM05D004842 ORTHO05D005929 5.5e-215 751.1 513 84.4
BcaB03g15725 Brassica carinata HOM05D004842 ORTHO05D005929 3.6e-214 748.4 511 83.2
MBI04_g37683_MAGBIO Magnolia biondii HOM05D004842 ORTHO05D005929 1.8e-213 746.1 515 86.8
Nitab4.5_0001799g0050 Nicotiana tabacum HOM05D004842 ORTHO05D005929 6.7e-213 744.2 511 90.0
arahy.Tifrunner.gnm1.ann1.907RVD Arachis hypogaea HOM05D004842 ORTHO05D005929 8.8e-213 743.8 513 88.5
CARHR066790 Cardamine hirsuta HOM05D004842 ORTHO05D005929 1.5e-212 743.0 511 81.8
Mapoly0044s0021 Marchantia polymorpha HOM05D004842 ORTHO05D005929 2.6e-212 742.3 513 86.5
Nitab4.5_0006564g0010 Nicotiana tabacum HOM05D004842 ORTHO05D005929 2.6e-212 742.3 485 92.0
Carub.0002s2047 Capsella rubella HOM05D004842 ORTHO05D005929 4.4e-212 741.5 511 85.1
A07p39580 Brassica napus HOM05D004842 ORTHO05D005929 3.7e-211 738.4 511 85.7
FAN04G0777 Fragaria x ananassa HOM05D004842 ORTHO05D005929 3.7e-211 738.4 541 80.4
BcaB03g15078 Brassica carinata HOM05D004842 ORTHO05D005929 4.8e-211 738.0 511 85.7
C06p47870 Brassica napus HOM05D004842 ORTHO05D005929 3.1e-210 735.3 509 85.7
BolC6t39822H Brassica oleracea HOM05D004842 ORTHO05D005929 3.1e-210 735.3 509 85.7
AL2G33520 Arabidopsis lyrata HOM05D004842 ORTHO05D005929 4.1e-210 734.9 500 86.4
Dinv07060 Davidia involucrata HOM05D004842 ORTHO05D005929 2.9e-208 728.8 513 76.6
FAN08G0446 Fragaria x ananassa HOM05D004842 ORTHO05D005929 2.5e-207 725.7 513 83.0
AUR62000532 Chenopodium quinoa HOM05D004842 ORTHO05D005929 7.5e-204 714.1 513 77.8
AT1G73720 Arabidopsis thaliana HOM05D004842 ORTHO05D005929 2.4e-202 709.1 511 85.3
BraA07t31507Z Brassica rapa HOM05D004842 ORTHO05D005929 2.4e-202 709.1 520 82.7
AagrBONN_evm.TU.Sc2ySwM_369.510 Anthoceros agrestis HOM05D004842 ORTHO05D005929 7.0e-202 707.6 556 78.2
arahy.Tifrunner.gnm1.ann1.VU3SB5 Arachis hypogaea HOM05D004842 ORTHO05D005929 1.2e-201 706.8 534 80.1
Peaxi162Scf00688g00227 Petunia axillaris HOM05D004842 ORTHO05D005929 2.3e-200 702.6 484 88.8
Pp3c7_2610 Physcomitrium patens HOM05D004842 ORTHO05D005929 2.9e-200 702.2 513 82.5
Pp3c11_23660 Physcomitrium patens HOM05D004842 ORTHO05D005929 1.1e-199 700.3 513 80.1
unitig_748.g7731 Utricularia gibba HOM05D004842 ORTHO05D005929 5.5e-199 698.0 553 72.3
TAR375G0910 Trochodendron aralioides HOM05D004842 ORTHO05D005929 1.0e-197 693.7 463 93.3
CBR_g5735 Chara braunii HOM05D004842 ORTHO05D005929 3.0e-197 692.2 513 82.1
Sc20g0002260 Simmondsia chinensis HOM05D004842 ORTHO05D005929 2.2e-195 686.0 467 91.0
Nitab4.5_0000748g0110 Nicotiana tabacum HOM05D004842 ORTHO05D005929 2.7e-193 679.1 515 84.7
CANSAT21G1785 Cannabis sativa HOM05D004842 ORTHO05D005929 1.7e-192 676.4 524 80.9
SMO119G0417 Selaginella moellendorffii HOM05D004842 ORTHO05D005929 4.4e-188 661.8 511 72.6
vmacro00929 Vaccinium macrocarpon HOM05D004842 ORTHO05D005929 4.3e-183 645.2 435 88.0
Manes.01G021200 Manihot esculenta HOM05D004842 ORTHO05D005929 2.6e-180 636.0 430 92.3
COL.COLO4_24626 Corchorus olitorius HOM05D004842 ORTHO05D005929 9.2e-178 627.5 428 89.5
BcaC08g46793 Brassica carinata HOM05D004842 ORTHO05D005929 2.3e-160 569.7 511 71.4
SEGI_07677 Sequoiadendron giganteum HOM05D004842 ORTHO05D005929 6.9e-157 558.1 414 85.0
Cre01.g020400 Chlamydomonas reinhardtii HOM05D004842 ORTHO05D005929 1.9e-154 550.1 511 68.9
EL10Ac4g09640 Beta vulgaris HOM05D004842 ORTHO05D005929 3.0e-144 516.2 270 94.1
TPR.G33753 Trifolium pratense HOM05D004842 ORTHO05D005929 1.7e-131 473.8 253 92.1
Hma1.2p1_1698F.1_g298123 Hydrangea macrophylla HOM05D004842 ORTHO05D005929 2.8e-126 456.4 322 85.4
Zm00001eb130810 Zea mays HOM05D004842 ORTHO05D005929 3.2e-122 443.0 312 79.8
EL10Ac4g09644 Beta vulgaris HOM05D004842 ORTHO05D005929 8.2e-118 428.3 386 62.4
arahy.Tifrunner.gnm1.ann1.6AWP8P Arachis hypogaea HOM05D004842 ORTHO05D005929 2.7e-105 386.7 209 93.3
arahy.Tifrunner.gnm1.ann1.UIX0GM Arachis hypogaea HOM05D004842 ORTHO05D005929 6.1e-105 385.6 209 92.8
Lj9C233G3 Lonicera japonica HOM05D004842 ORTHO05D005929 9.7e-95 351.7 365 75.1
Actinidia15960 Actinidia chinensis HOM05D004842 ORTHO05D005929 1.8e-77 294.3 257 80.2
PRCOL_00002301 Prasinoderma coloniale HOM05D004842 ORTHO05D005929 5.9e-76 289.3 522 49.6
EL10Ac4g09638 Beta vulgaris HOM05D004842 ORTHO05D005929 3.5e-68 263.5 175 88.0
Haze_13915 Corylus avellana HOM05D004842 ORTHO05D005929 6.4e-62 242.7 133 92.5
C06p33880 Brassica napus HOM05D004842 ORTHO05D005929 1.4e-61 241.5 526 34.8
PSO384G0554 Papaver somniferum HOM05D004842 ORTHO05D005929 4.4e-47 193.4 99 87.9
Haze_27333 Corylus avellana HOM05D004842 ORTHO05D005929 3.6e-41 173.7 254 39.8
Ca_03946_v3 Cicer arietinum L. HOM05D004842 ORTHO05D005929 1.1e-40 172.2 150 61.3
Cpa.g.c40110 Carica papaya HOM05D004842 ORTHO05D005929 2.9e-38 164.1 80 93.8
SEGI_19922 Sequoiadendron giganteum HOM05D004842 ORTHO05D005929 2.1e-33 147.9 79 91.1
Sabra16G0312200 Salix brachista HOM05D004842 ORTHO05D005929 4.8e-33 146.7 178 50.6
BolC2t07949H Brassica oleracea HOM05D004842 ORTHO05D005929 1.5e-31 141.7 137 62.0
RcHm_v2.0_Chr6g0269341 Rosa chinensis HOM05D004842 ORTHO05D005929 2.2e-30 137.9 107 70.1
AL6G46370 Arabidopsis lyrata HOM05D004842 ORTHO05D005929 1.4e-29 135.2 299 30.8
BolC3t17856H Brassica oleracea HOM05D004842 ORTHO05D005929 8.7e-27 125.9 70 85.7
BolC5t34511H Brassica oleracea HOM05D004842 ORTHO05D005929 2.8e-25 120.9 69 85.5
C05p58610 Brassica napus HOM05D004842 ORTHO05D009094 3.1e-24 117.5 64 85.9
BolC4t22950H Brassica oleracea HOM05D004842 ORTHO05D005929 3.1e-24 117.5 64 85.9
BolC6t38501H Brassica oleracea HOM05D004842 ORTHO05D005929 6.0e-20 103.2 56 80.4
Duzib211G0352 Durio zibethinus HOM05D004842 ORTHO05D005929 7.9e-20 102.8 56 80.4
Glyma.04G106300 Glycine max HOM05D004842 ORTHO05D005929 5.7e-18 96.7 73 64.4
Glyma.04G149500 Glycine max HOM05D004842 ORTHO05D005929 5.7e-18 96.7 73 64.4
TPR.G15252 Trifolium pratense HOM05D004842 ORTHO05D005929 2.1e-17 94.7 47 89.4
Actinidia15959 Actinidia chinensis HOM05D004842 ORTHO05D005929 1.1e-16 92.4 47 97.9
ECA238G3245 Erigeron canadensis HOM05D000757 ORTHO05D000622 5.0e-14 83.6 41 85.4
ECA248G1356 Erigeron canadensis HOM05D006056 ORTHO05D007136 9.3e-13 79.3 41 80.5
Sed0018019 Sechium edule HOM05D004842 ORTHO05D005929 1.2e-12 79.0 105 44.8
Cfa012955 Carpinus fangiana HOM05D002874 ORTHO05D003250 1.8e-11 75.1 36 88.9
Actinidia15961 Actinidia chinensis HOM05D004842 ORTHO05D005929 2.3e-11 74.7 122 36.9
TPR.G33759 Trifolium pratense HOM05D004842 ORTHO05D005929 6.7e-11 73.2 134 74.6
C04p47590 Brassica napus HOM05D007212 ORTHO05D009094 2.2e-06 58.2 35 77.1
Lsat_1_v5_gn_3_52840 Lactuca sativa HOM05D004842 ORTHO05D005929 2.9e-06 57.8 35 71.4
Actinidia23032 Actinidia chinensis HOM05D004842 ORTHO05D008384 3.8e-06 57.4 74 51.4


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