Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_23570_v3 Cicer arietinum L. HOM05D006570 ORTHO05D008193 3.4e-264 914.4 465 100.0
Ca_23579_v3 Cicer arietinum L. HOM05D006570 ORTHO05D008193 3.4e-264 914.4 465 100.0
TPR.G5123 Trifolium pratense HOM05D006570 ORTHO05D008193 2.8e-226 788.5 466 86.9
Medtr8g028105 Medicago truncatula HOM05D006570 ORTHO05D008193 3.6e-221 771.5 464 86.0
Lj3g0023743 Lotus japonicus HOM05D006570 ORTHO05D008193 3.7e-210 734.9 456 80.5
Glyma.07G059700 Glycine max HOM05D006570 ORTHO05D008193 2.1e-205 719.2 443 82.6
Phvul.010G109900 Phaseolus vulgaris HOM05D006570 ORTHO05D008193 7.7e-200 700.7 464 77.2
Psat4g158840 Pisum sativum HOM05D006570 ORTHO05D008193 7.5e-195 684.1 394 88.8
VMungo0331G0798 Vigna mungo HOM05D006570 ORTHO05D008193 2.4e-193 679.1 471 75.8
arahy.Tifrunner.gnm1.ann1.L2UBUE Arachis hypogaea HOM05D006570 ORTHO05D008193 1.7e-186 656.4 481 71.3
arahy.Tifrunner.gnm1.ann1.N5JW36 Arachis hypogaea HOM05D006570 ORTHO05D008193 1.7e-186 656.4 479 72.0
Lalb_Chr10g0100201 Lupinus albus HOM05D006570 ORTHO05D008193 1.2e-184 650.2 444 73.6
Cfa006298 Carpinus fangiana HOM05D006570 ORTHO05D008193 1.1e-172 610.5 435 69.2
Haze_04512 Corylus avellana HOM05D006570 ORTHO05D008193 2.9e-170 602.4 429 69.2
CiPaw.07G077200 Carya illinoinensis HOM05D006570 ORTHO05D008193 1.5e-166 590.1 432 68.3
Atru.chr6.3468 Acer truncatum HOM05D006570 ORTHO05D008193 5.6e-166 588.2 431 68.4
Ciclev10015195m.g Citrus clementina HOM05D006570 ORTHO05D008193 1.2e-165 587.0 460 64.6
Potri.014G198000 Populus trichocarpa HOM05D006570 ORTHO05D008193 1.2e-163 580.5 437 66.1
Dinv28772 Davidia involucrata HOM05D006570 ORTHO05D008193 1.4e-161 573.5 436 66.1
FvH4_3g28500 Fragaria vesca HOM05D006570 ORTHO05D008193 2.4e-161 572.8 460 65.0
CANSAT01G0840 Cannabis sativa HOM05D006570 ORTHO05D008193 5.1e-159 565.1 437 63.6
Lj2A1109T67 Lonicera japonica HOM05D006570 ORTHO05D008193 1.5e-158 563.5 427 65.8
Prupe.6G214800 Prunus persica HOM05D006570 ORTHO05D008193 4.3e-158 562.0 416 67.1
FAN21G3910 Fragaria x ananassa HOM05D006570 ORTHO05D008193 2.8e-157 559.3 459 63.6
TWI18G1431 Tripterygium wilfordii HOM05D006570 ORTHO05D008193 1.4e-156 557.0 460 62.6
RcHm_v2.0_Chr5g0052821 Rosa chinensis HOM05D006570 ORTHO05D008193 1.8e-156 556.6 466 62.9
Duzib133G0843 Durio zibethinus HOM05D006570 ORTHO05D008193 3.1e-156 555.8 454 63.0
Gohir.D07G093500 Gossypium hirsutum HOM05D006570 ORTHO05D008193 3.1e-156 555.8 454 63.0
Gorai.001G100200 Gossypium raimondii HOM05D006570 ORTHO05D008193 3.1e-156 555.8 454 63.0
Manes.13G058200 Manihot esculenta HOM05D006570 ORTHO05D008193 6.8e-156 554.7 457 61.1
Thecc.01G203700 Theobroma cacao HOM05D006570 ORTHO05D008193 3.4e-155 552.4 461 63.1
TAR362G0032 Trochodendron aralioides HOM05D006570 ORTHO05D008193 3.8e-154 548.9 455 62.9
Sabra14G0132400 Salix brachista HOM05D006570 ORTHO05D008193 1.1e-153 547.4 549 55.2
Actinidia11648 Actinidia chinensis HOM05D006570 ORTHO05D008193 1.4e-153 547.0 428 64.0
CsaV3_6G007600 Cucumis sativus L. HOM05D006570 ORTHO05D008193 1.4e-153 547.0 438 63.2
Oeu020442.2 Olea europaea HOM05D006570 ORTHO05D008193 5.4e-153 545.0 439 64.0
Hma1.2p1_0834F.1_g225720 Hydrangea macrophylla HOM05D006570 ORTHO05D008193 9.3e-153 544.3 402 67.7
Cpa.g.sc8.9 Carica papaya HOM05D006570 ORTHO05D008193 4.6e-152 542.0 467 61.5
Gohir.A07G088500 Gossypium hirsutum HOM05D006570 ORTHO05D008193 1.3e-151 540.4 454 62.3
MD15G1141300 Malus domestica HOM05D006570 ORTHO05D008193 5.1e-151 538.5 429 64.6
vmacro02851 Vaccinium macrocarpon HOM05D006570 ORTHO05D008193 5.1e-151 538.5 428 65.0
COL.COLO4_19720 Corchorus olitorius HOM05D006570 ORTHO05D008193 1.2e-147 527.3 407 66.1
SalBow2G2795 Salvia bowleyana HOM05D006570 ORTHO05D008193 2.0e-147 526.6 444 59.9
SalBow6G3933 Salvia bowleyana HOM05D006570 ORTHO05D008193 3.4e-147 525.8 444 59.7
Solyc09g018850.3 Solanum lycopersicum HOM05D006570 ORTHO05D008193 3.4e-147 525.8 415 63.6
Sopen09g012610 Solanum pennellii HOM05D006570 ORTHO05D008193 3.4e-147 525.8 415 63.6
Ah.11g050650 Amaranthus hybridus HOM05D006570 ORTHO05D008193 1.7e-146 523.5 451 59.4
ClCG06G001630 Citrullus lanatus HOM05D006570 ORTHO05D008193 2.9e-146 522.7 441 61.5
Migut.D00755 Erythranthe guttata HOM05D006570 ORTHO05D008193 9.3e-145 517.7 442 60.6
PGSC0003DMG400020287 Solanum tuberosum HOM05D006570 ORTHO05D008193 2.7e-144 516.2 442 60.2
Aa31sc565G50 Aethionema arabicum HOM05D006570 ORTHO05D008193 3.5e-144 515.8 443 60.7
PGR083G1749 Punica granatum HOM05D006570 ORTHO05D008193 1.7e-143 513.5 455 60.4
GSVIVG01004124001 Vitis vinifera HOM05D006570 ORTHO05D008193 1.7e-143 513.5 470 58.7
AL9U11910 Arabidopsis lyrata HOM05D006570 ORTHO05D008193 3.9e-143 512.3 412 62.1
Carub.0007s3008 Capsella rubella HOM05D006570 ORTHO05D008193 3.9e-143 512.3 412 62.6
PSO170G2695 Papaver somniferum HOM05D006570 ORTHO05D008193 8.7e-143 511.1 458 57.4
Cc01_g15710 Coffea canephora HOM05D006570 ORTHO05D008193 1.5e-142 510.4 464 58.4
Aqoxy7G03970 Aquilegia oxysepala HOM05D006570 ORTHO05D008193 1.9e-142 510.0 479 56.6
MBI10_g46813_MAGBIO Magnolia biondii HOM05D006570 ORTHO05D008193 5.6e-142 508.4 459 59.5
AT4G12740 Arabidopsis thaliana HOM05D006570 ORTHO05D008193 3.6e-141 505.8 414 61.6
ECA236G3480 Erigeron canadensis HOM05D006570 ORTHO05D008193 3.6e-141 505.8 414 60.9
EL10Ac5g10565 Beta vulgaris HOM05D006570 ORTHO05D008193 4.8e-141 505.4 421 60.3
Aqoxy1G01428 Aquilegia oxysepala HOM05D006570 ORTHO05D008193 1.4e-140 503.8 478 56.1
Peaxi162Scf12724g00014 Petunia axillaris HOM05D006570 ORTHO05D008193 1.4e-140 503.8 440 59.1
BcaC02g09469 Brassica carinata HOM05D006570 ORTHO05D008193 1.8e-140 503.4 416 61.1
BcaB03g16147 Brassica carinata HOM05D006570 ORTHO05D008193 2.4e-140 503.1 433 59.8
Nitab4.5_0005967g0010 Nicotiana tabacum HOM05D006570 ORTHO05D008193 3.1e-140 502.7 415 60.5
Sp7g09050 Schrenkiella parvula HOM05D006570 ORTHO05D008193 9.0e-140 501.1 425 59.8
C04p43140 Brassica napus HOM05D006570 ORTHO05D008193 1.2e-139 500.7 416 60.8
A04p09180 Brassica napus HOM05D006570 ORTHO05D008193 4.5e-139 498.8 435 59.5
THA.LOC104815379 Tarenaya hassleriana HOM05D006570 ORTHO05D008193 7.6e-139 498.0 446 59.0
Thhalv10024575m.g Eutrema salsugineum HOM05D006570 ORTHO05D008193 1.3e-138 497.3 416 61.1
Nitab4.5_0009028g0030 Nicotiana tabacum HOM05D006570 ORTHO05D008193 4.2e-137 492.3 439 58.8
Sc05g0001500 Simmondsia chinensis HOM05D006570 ORTHO05D008193 4.2e-137 492.3 489 53.0
HanXRQChr16g0508391 Helianthus annuus HOM05D006570 ORTHO05D008193 2.7e-136 489.6 456 56.1
ATR0743G076 Amborella trichopoda HOM05D006570 ORTHO05D008193 3.5e-136 489.2 417 60.4
CARHR218120 Cardamine hirsuta HOM05D006570 ORTHO05D008193 4.6e-136 488.8 445 57.3
CDE09G0147 Ceratophyllum demersum HOM05D006570 ORTHO05D008193 6.7e-135 485.0 442 58.4
AUR62008045 Chenopodium quinoa HOM05D006570 ORTHO05D008193 6.7e-135 485.0 468 55.1
AUR62032342 Chenopodium quinoa HOM05D006570 ORTHO05D008193 6.7e-135 485.0 468 55.1
Hund09495 Selenicereus undatus HOM05D006570 ORTHO05D008193 6.7e-135 485.0 380 62.6
AUR62028620 Chenopodium quinoa HOM05D006570 ORTHO05D008193 2.5e-134 483.0 468 54.3
MELO3C022371.2 Cucumis melo HOM05D006570 ORTHO05D008193 1.3e-133 480.7 425 59.8
DCAR_012712 Daucus carota HOM05D006570 ORTHO05D008193 3.7e-133 479.2 408 60.0
BolC4t25891H Brassica oleracea HOM05D006570 ORTHO05D008193 6.2e-133 478.4 424 58.5
HPP92_007590 Vanilla planifolia HOM05D006570 ORTHO05D008193 1.1e-132 477.6 457 55.8
BraA04t16613Z Brassica rapa HOM05D006570 ORTHO05D008193 9.0e-132 474.6 450 56.2
Rhsim13G0056200 Rhododendron simsii HOM05D006570 ORTHO05D008193 2.2e-130 469.9 392 61.0
Os12g0211400 Oryza sativa ssp. japonica HOM05D006570 ORTHO05D008193 1.2e-128 464.2 420 57.1
CAN.G3.13 Capsicum annuum HOM05D006570 ORTHO05D008193 4.6e-128 462.2 380 60.3
Zm00001eb411200 Zea mays HOM05D006570 ORTHO05D008193 6.7e-127 458.4 474 52.7
SHI10196 Sapria himalayana HOM05D006570 ORTHO05D008193 8.7e-127 458.0 462 53.9
Hma1.2p1_0834F.1_g225710 Hydrangea macrophylla HOM05D006570 ORTHO05D008193 1.8e-124 450.3 367 62.7
Lsat_1_v5_gn_8_98640 Lactuca sativa HOM05D006570 ORTHO05D008193 7.9e-120 434.9 426 56.6
SEGI_12299 Sequoiadendron giganteum HOM05D006570 ORTHO05D008193 6.7e-119 431.8 446 52.2
FAN25G2405 Fragaria x ananassa HOM05D006570 ORTHO05D008193 6.3e-117 425.2 530 47.7
Os12g0212100 Oryza sativa ssp. japonica HOM05D006570 ORTHO05D008193 3.8e-114 416.0 355 59.7
Hma1.2p1_1756F.1_g301050 Hydrangea macrophylla HOM05D006570 ORTHO05D008193 1.4e-108 397.5 319 62.7
Pp3c18_200 Physcomitrium patens HOM05D006570 ORTHO05D008193 2.9e-106 389.8 497 45.1
unitig_90.g27554 Utricularia gibba HOM05D006570 ORTHO05D008193 8.5e-106 388.3 431 50.3
Eucgr.H00676 Eucalyptus grandis HOM05D006570 ORTHO05D008193 2.0e-102 377.1 299 63.9
Actinidia23139 Actinidia chinensis HOM05D006570 ORTHO05D008193 5.7e-102 375.6 438 48.2
Mapoly0043s0062 Marchantia polymorpha HOM05D006570 ORTHO05D008193 6.5e-98 362.1 560 39.8
MBI10_g40441_MAGBIO Magnolia biondii HOM05D006570 ORTHO05D008193 1.6e-96 357.5 316 58.2
QL01p050877 Quercus lobata HOM05D006570 ORTHO05D008193 1.2e-83 314.7 262 62.6
SMO202G0040 Selaginella moellendorffii HOM05D006570 ORTHO05D008193 3.6e-80 303.1 295 54.2
FAN11G0847 Fragaria x ananassa HOM05D006570 ORTHO05D008193 4.7e-80 302.8 246 61.4
MCO12G048 Micromonas commoda HOM05D006570 ORTHO05D008193 2.6e-70 270.4 464 39.4
PRCOL_00001086 Prasinoderma coloniale HOM05D006570 ORTHO05D008193 1.3e-69 268.1 351 44.4
Cre02.g082000 Chlamydomonas reinhardtii HOM05D006570 ORTHO05D008193 9.5e-57 225.3 287 45.3
CSS0008113 Camellia sinensis var. sinensis HOM05D006570 ORTHO05D008193 6.4e-53 212.6 126 78.6
CSS0032158 Camellia sinensis var. sinensis HOM05D006570 ORTHO05D008193 6.4e-53 212.6 126 78.6
GSVIVG01038286001 Vitis vinifera HOM05D006570 ORTHO05D008193 2.7e-51 207.2 188 54.8
Glyma.16G028601 Glycine max HOM05D006570 ORTHO05D008193 3.0e-42 177.2 109 81.7
Ca_29093_v3 Cicer arietinum L. HOM05D006570 ORTHO05D008193 5.1e-42 176.4 285 38.9
QL01p050896 Quercus lobata HOM05D006570 ORTHO05D008193 1.6e-40 171.4 115 73.9
DCAR_012713 Daucus carota HOM05D006570 ORTHO05D008193 1.2e-38 165.2 135 61.5
CDE02G1275 Ceratophyllum demersum HOM05D006570 ORTHO05D008193 2.4e-31 141.0 137 54.7
QL05p014267 Quercus lobata HOM05D006570 ORTHO05D008193 2.4e-31 141.0 190 44.2
QL05p014599 Quercus lobata HOM05D006570 ORTHO05D008193 9.9e-30 135.6 128 58.6
CBR_g38520 Chara braunii HOM05D000019 ORTHO05D000048 2.0e-22 111.3 74 71.6
PGR142G0081 Punica granatum HOM05D006570 ORTHO05D008193 1.3e-18 98.6 130 45.4
CBR_g38518 Chara braunii HOM05D000019 ORTHO05D000048 2.7e-11 74.3 140 34.3
Sed0019525 Sechium edule HOM05D004358 ORTHO05D004960 6.3e-08 63.2 163 31.9
Nitab4.5_0001787g0060 Nicotiana tabacum HOM05D004358 ORTHO05D004960 1.4e-07 62.0 207 28.0
Hund03151 Selenicereus undatus HOM05D004358 ORTHO05D004960 1.4e-07 62.0 154 30.5
A03p17630 Brassica napus HOM05D004358 ORTHO05D004960 2.4e-07 61.2 194 27.3
BraA03t11028Z Brassica rapa HOM05D004358 ORTHO05D004960 2.4e-07 61.2 194 27.3
SGA_v2.0_scaffold181G39728 Striga asiatica HOM05D004358 ORTHO05D004960 2.4e-07 61.2 155 30.3
Medtr4g067060 Medicago truncatula HOM05D004358 ORTHO05D004960 3.1e-07 60.8 187 27.3
Sp4g13930 Schrenkiella parvula HOM05D004358 ORTHO05D004960 3.1e-07 60.8 194 26.8
BcaB01g04044 Brassica carinata HOM05D004358 ORTHO05D004960 4.1e-07 60.5 194 26.8
Peaxi162Scf00058g01717 Petunia axillaris HOM05D004358 ORTHO05D004960 4.1e-07 60.5 207 27.1
RcHm_v2.0_Chr4g0407021 Rosa chinensis HOM05D004358 ORTHO05D004960 4.1e-07 60.5 193 28.5
PGSC0003DMG401006099 Solanum tuberosum HOM05D004358 ORTHO05D004960 4.1e-07 60.5 167 30.5
TPR.G34203 Trifolium pratense HOM05D004358 ORTHO05D004960 5.3e-07 60.1 204 26.0
Aa31LG5G5430 Aethionema arabicum HOM05D004358 ORTHO05D004960 6.9e-07 59.7 194 26.8
Psat7g213960 Pisum sativum HOM05D004358 ORTHO05D004960 6.9e-07 59.7 193 26.4
unitig_8.g4603 Utricularia gibba HOM05D004358 ORTHO05D004960 6.9e-07 59.7 193 26.9
BcaC01g05950 Brassica carinata HOM05D004358 ORTHO05D004960 9.0e-07 59.3 194 26.8
C03p20720 Brassica napus HOM05D004358 ORTHO05D004960 9.0e-07 59.3 194 26.8
BolC3t14451H Brassica oleracea HOM05D004358 ORTHO05D004960 9.0e-07 59.3 194 26.8
Lsat_1_v5_gn_8_80540 Lactuca sativa HOM05D004358 ORTHO05D004960 9.0e-07 59.3 190 28.4
Manes.04G041200 Manihot esculenta HOM05D004358 ORTHO05D004960 1.2e-06 58.9 193 27.5
Haze_01520 Corylus avellana HOM05D004358 ORTHO05D004960 1.5e-06 58.5 158 27.8
FAN12G1706 Fragaria x ananassa HOM05D004358 ORTHO05D004960 1.5e-06 58.5 192 26.6
Aqoxy7G00192 Aquilegia oxysepala HOM05D004358 ORTHO05D004960 2.0e-06 58.2 234 23.9
FvH4_4g10690 Fragaria vesca HOM05D004358 ORTHO05D004960 2.0e-06 58.2 192 26.6
FAN12G4165 Fragaria x ananassa HOM05D004358 ORTHO05D004960 2.0e-06 58.2 192 26.6
Os12g0211301 Oryza sativa ssp. japonica HOM05D006570 ORTHO05D008193 2.0e-06 58.2 101 34.7
Prupe.1G191600 Prunus persica HOM05D004358 ORTHO05D004960 2.0e-06 58.2 193 26.4
SMO347G0587 Selaginella moellendorffii HOM05D004358 ORTHO05D004960 2.0e-06 58.2 204 26.5
Sopen09g031880 Solanum pennellii HOM05D004358 ORTHO05D004960 2.0e-06 58.2 210 27.6
AT1G05900 Arabidopsis thaliana HOM05D004358 ORTHO05D004960 2.6e-06 57.8 176 26.1
CAN.G749.19 Capsicum annuum HOM05D004358 ORTHO05D004960 2.6e-06 57.8 152 29.6
Cfa015153 Carpinus fangiana HOM05D004358 ORTHO05D004960 2.6e-06 57.8 193 26.9
Duzib151G0384 Durio zibethinus HOM05D004358 ORTHO05D004960 2.6e-06 57.8 187 26.7
AL1G15860 Arabidopsis lyrata HOM05D004358 ORTHO05D004960 3.4e-06 57.4 176 26.1
AL4G26720 Arabidopsis lyrata HOM05D004358 ORTHO05D004960 3.4e-06 57.4 194 26.8
Carub.0001s0527 Capsella rubella HOM05D004358 ORTHO05D004960 3.4e-06 57.4 193 25.4
MELO3C017721.2 Cucumis melo HOM05D004358 ORTHO05D004960 3.4e-06 57.4 158 29.1
Zm00001eb406830 Zea mays HOM05D004358 ORTHO05D004960 3.4e-06 57.4 196 26.5
Ca_20780_v3 Cicer arietinum L. HOM05D004358 ORTHO05D004960 4.5e-06 57.0 206 26.7
Thhalv10016815m.g Eutrema salsugineum HOM05D004358 ORTHO05D004960 4.5e-06 57.0 154 29.2
MSTRG.6615 Avicennia marina HOM05D004358 ORTHO05D004960 7.6e-06 56.2 193 26.4
COL.COLO4_02723 Corchorus olitorius HOM05D004358 ORTHO05D004960 7.6e-06 56.2 192 26.6
CsaV3_4G003300 Cucumis sativus L. HOM05D004358 ORTHO05D004960 7.6e-06 56.2 158 28.5
ECA236G3148 Erigeron canadensis HOM05D004358 ORTHO05D004960 7.6e-06 56.2 162 28.4
MD04G1007400 Malus domestica HOM05D004358 ORTHO05D004960 7.6e-06 56.2 187 27.3
ClCG07G015600 Citrullus lanatus HOM05D004358 ORTHO05D004960 1.0e-05 55.8 158 28.5
Eucgr.H00376 Eucalyptus grandis HOM05D004358 ORTHO05D004960 1.0e-05 55.8 151 30.5
Thhalv10007955m.g Eutrema salsugineum HOM05D004358 ORTHO05D004960 1.0e-05 55.8 155 27.7
Mapoly0058s0068 Marchantia polymorpha HOM05D004358 ORTHO05D004960 1.0e-05 55.8 193 27.5


User provided reference genes

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