Gene: TPR.G5123

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G5123
  • Transcript Identifier TPR.T5300
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_LG3 : 24205529-24209872 : positive

Gene Family Information

  • ID HOM05D006570
  • #Genes/#Species 122/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA5300.v2
  • id Tp57577_TGAC_v2_gene5123.v2
  • pacid 35988866

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006284
IEA
InterProbase-excision repair
GO:0006281
IEA
InterProDNA repair

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016798
IEA
InterProhydrolase activity, acting on glycosyl bonds
GO:0003824
IEA
InterProcatalytic activity
GO:0003677
ISO
PLAZA Homology (enrichment)DNA binding HOM05D006570

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR023170 Helix-hairpin-helix, base-excision DNA repair, C-terminal
IPR029119 MutY, C-terminal
IPR003265 HhH-GPD domain
IPR044298 Adenine/Thymine-DNA glycosylase
IPR011257 DNA glycosylase
IPR015797 NUDIX hydrolase-like domain superfamily
Mapman id Description
35.1 not assigned.annotated