Gene: Thecc.01G203700
General Information
Structural Information
- Species Theobroma cacao
- Gene Identifier Thecc.01G203700
- Transcript Identifier Thecc.01G203700.1
- Gene Type Coding gene
- Location Chromosome_1 : 14775195-14778101 : negative
Gene Family Information
- ID HOM05D006570
- #Genes/#Species 122/94
- Phylogenetic origin
- ID ORTHO05D008193
- #Genes/#Species 122/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Thecc.01G203700.v2.1
- pacid 42018047
- ancestorIdentifier Thecc1EG002530.CGDv1.1
- ancestorIdentifier Thecc1EG002530t1.CGDv1.1
Descriptions
- Description HhH-GPD base excision DNA repair family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006284 | IEA | InterPro | base-excision repair | |
| GO:0006281 | IEA | InterPro | DNA repair |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0019104 | IEA | InterPro | DNA N-glycosylase activity | |
| GO:0016798 | IEA | InterPro | hydrolase activity, acting on glycosyl bonds | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003824 | IEA | InterPro | catalytic activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003265 | HhH-GPD domain |
| IPR023170 | Helix-hairpin-helix, base-excision DNA repair, C-terminal |
| IPR005760 | A/G-specific adenine glycosylase MutY |
| IPR044298 | Adenine/Thymine-DNA glycosylase |
| IPR000445 | Helix-hairpin-helix motif |
| IPR029119 | MutY, C-terminal |
| IPR015797 | NUDIX hydrolase-like domain superfamily |
| IPR011257 | DNA glycosylase |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |