Gene: Sopen09g012610

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen09g012610
  • Transcript Identifier Sopen09g012610.2
  • Gene Type Coding gene
  • Location Spenn-ch09 : 23377454-23380496 : positive

Gene Family Information

  • ID HOM05D006570
  • #Genes/#Species 122/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen09g012610.2

Descriptions

  • Description HhH-GPD base excision DNA repair family protein | FUNCTIONS IN: hydrolase activity, catalytic activity | INVOLVED IN: DNA repair, base-excision repair | EXPRESSED IN: 10 plant structures | EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage | CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like , DNA glycosylase , NUDIX hydrolase domain , HhH-GPD domain
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006284
IEA
InterProbase-excision repair
GO:0006281
IEA
InterProDNA repair

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016798
IEA
InterProhydrolase activity, acting on glycosyl bonds
GO:0003677
IEA
InterProDNA binding
GO:0019104
IEA
InterProDNA N-glycosylase activity
GO:0003824
IEA
InterProcatalytic activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044298 Adenine/Thymine-DNA glycosylase
IPR003265 HhH-GPD domain
IPR000445 Helix-hairpin-helix motif
IPR023170 Helix-hairpin-helix, base-excision DNA repair, C-terminal
IPR005760 A/G-specific adenine glycosylase MutY
IPR015797 NUDIX hydrolase-like domain superfamily
IPR029119 MutY, C-terminal
IPR011257 DNA glycosylase
Mapman id Description
35.1 not assigned.annotated