Gene: Solyc09g018850.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc09g018850.3
  • Transcript Identifier Solyc09g018850.3.1
  • Gene Type Coding gene
  • Location SL4.0ch09 : 17715926-17718904 : positive

Gene Family Information

  • ID HOM05D006570
  • #Genes/#Species 122/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc09g018850.3.1
  • uniprot A0A3Q7IWD1
  • gene_id Solyc09g018850

Descriptions

  • Description A/G-specific adenine DNA glycosylase (AHRD V3.3 *** A0A2G3BL05_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008152
IEA
GOA Databasemetabolic process
GO:0006298
IBA
GOA Databasemismatch repair
GO:0006284
IBA
IEA
GOA Databasebase-excision repair
GO:0006284
IEA
InterProbase-excision repair
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006281
IEA
InterProDNA repair

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032357
IBA
GOA Databaseoxidized purine DNA binding
GO:0035485
IBA
GOA Databaseadenine/guanine mispair binding
GO:0034039
IBA
GOA Database8-oxo-7,8-dihydroguanine DNA N-glycosylase activity
GO:0000701
IBA
IEA
GOA Databasepurine-specific mismatch base pair DNA N-glycosylase activity
GO:0019104
IEA
GOA DatabaseDNA N-glycosylase activity
GO:0019104
IEA
InterProDNA N-glycosylase activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0016798
IEA
GOA Databasehydrolase activity, acting on glycosyl bonds
GO:0016798
IEA
InterProhydrolase activity, acting on glycosyl bonds
GO:0051536
IEA
GOA Databaseiron-sulfur cluster binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0051539
IEA
GOA Database4 iron, 4 sulfur cluster binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011257 DNA glycosylase
IPR003265 HhH-GPD domain
IPR005760 A/G-specific adenine glycosylase MutY
IPR015797 NUDIX hydrolase-like domain superfamily
IPR029119 MutY, C-terminal
IPR000445 Helix-hairpin-helix motif
IPR044298 Adenine/Thymine-DNA glycosylase
IPR023170 Helix-hairpin-helix, base-excision DNA repair, C-terminal
Mapman id Description
35.1 not assigned.annotated