Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_11424_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 6.4e-61 237.3 123 100.0
Psat6g243280 Pisum sativum HOM05D006139 ORTHO05D007681 1.3e-48 196.4 106 94.3
TPR.G8879 Trifolium pratense HOM05D006139 ORTHO05D007681 4.8e-48 194.5 107 91.6
Medtr1g116980 Medicago truncatula HOM05D006139 ORTHO05D007681 8.1e-48 193.7 107 93.5
VMungo0720G1636 Vigna mungo HOM05D006139 ORTHO05D007681 1.5e-46 189.5 107 91.6
Lj5g0023092 Lotus japonicus HOM05D006139 ORTHO05D007681 8.4e-45 183.7 106 89.6
Glyma.20G248800 Glycine max HOM05D006139 ORTHO05D007681 7.1e-44 180.6 107 86.9
Lalb_Chr06g0164661 Lupinus albus HOM05D006139 ORTHO05D007681 3.5e-43 178.3 106 84.0
Phvul.007G001600 Phaseolus vulgaris HOM05D006139 ORTHO05D007681 1.5e-41 172.9 107 85.0
arahy.Tifrunner.gnm1.ann1.46LBLY Arachis hypogaea HOM05D006139 ORTHO05D007681 2.5e-41 172.2 108 80.6
arahy.Tifrunner.gnm1.ann1.JAL8JD Arachis hypogaea HOM05D006139 ORTHO05D007681 2.1e-40 169.1 115 77.4
TPR.G8907 Trifolium pratense HOM05D006139 ORTHO05D007681 6.2e-40 167.5 91 94.5
Potri.011G107400 Populus trichocarpa HOM05D006139 ORTHO05D007681 2.6e-38 162.2 107 74.8
Haze_11079 Corylus avellana HOM05D006139 ORTHO05D007681 6.4e-37 157.5 106 73.6
Ciclev10019318m.g Citrus clementina HOM05D006139 ORTHO05D007681 1.4e-36 156.4 105 69.5
CiPaw.01G108300 Carya illinoinensis HOM05D006139 ORTHO05D007681 3.2e-36 155.2 105 75.2
Lsat_1_v5_gn_3_24941 Lactuca sativa HOM05D006139 ORTHO05D007681 7.1e-36 154.1 106 72.6
Lj4A728T41 Lonicera japonica HOM05D006139 ORTHO05D007681 7.1e-36 154.1 111 66.7
ECA246G3778 Erigeron canadensis HOM05D006139 ORTHO05D007681 9.3e-36 153.7 106 70.8
TAR365G1167 Trochodendron aralioides HOM05D006139 ORTHO05D007681 2.1e-35 152.5 106 69.8
Manes.03G099000 Manihot esculenta HOM05D006139 ORTHO05D007681 2.7e-35 152.1 106 68.9
CSS0045945 Camellia sinensis var. sinensis HOM05D006139 ORTHO05D007681 4.6e-35 151.4 106 69.8
MD13G1278700 Malus domestica HOM05D006139 ORTHO05D007681 6.0e-35 151.0 105 71.4
RcHm_v2.0_Chr4g0409801 Rosa chinensis HOM05D006139 ORTHO05D007681 6.0e-35 151.0 105 72.4
Sed0017452 Sechium edule HOM05D006139 ORTHO05D007681 6.0e-35 151.0 105 68.6
Sopen09g036170 Solanum pennellii HOM05D006139 ORTHO05D007681 6.0e-35 151.0 105 66.7
FvH4_4g12150 Fragaria vesca HOM05D006139 ORTHO05D007681 7.9e-35 150.6 107 69.2
FAN12G2778 Fragaria x ananassa HOM05D006139 ORTHO05D007681 7.9e-35 150.6 107 69.2
PGSC0003DMG400014069 Solanum tuberosum HOM05D006139 ORTHO05D007681 1.0e-34 150.2 105 65.7
Sabra11G0095200 Salix brachista HOM05D006139 ORTHO05D007681 1.3e-34 149.8 107 72.0
GSVIVG01031668001 Vitis vinifera HOM05D006139 ORTHO05D007681 1.3e-34 149.8 106 68.9
MELO3C017678.2 Cucumis melo HOM05D006139 ORTHO05D007681 1.8e-34 149.4 105 67.6
Dinv44237 Davidia involucrata HOM05D006139 ORTHO05D007681 1.8e-34 149.4 106 67.0
CsaV3_4G003770 Cucumis sativus L. HOM05D006139 ORTHO05D007681 2.3e-34 149.1 105 67.6
Eucgr.F03241 Eucalyptus grandis HOM05D006139 ORTHO05D007681 3.9e-34 148.3 105 70.5
Prupe.1G178000 Prunus persica HOM05D006139 ORTHO05D007681 3.9e-34 148.3 106 69.8
Cc03_g10570 Coffea canephora HOM05D006139 ORTHO05D007681 5.1e-34 147.9 106 65.1
TWI38G2388 Tripterygium wilfordii HOM05D006139 ORTHO05D007681 1.1e-33 146.7 105 70.5
Atru.chr2.2053 Acer truncatum HOM05D006139 ORTHO05D007681 1.9e-33 146.0 104 66.3
Duzib213G0841 Durio zibethinus HOM05D006139 ORTHO05D007681 1.9e-33 146.0 106 67.9
Nn3g20967 Nelumbo nucifera HOM05D006139 ORTHO05D007681 1.9e-33 146.0 105 68.6
Solyc09g098230.3 Solanum lycopersicum HOM05D006139 ORTHO05D007681 2.5e-33 145.6 105 64.8
Cpa.g.sc77.50 Carica papaya HOM05D006139 ORTHO05D007681 4.3e-33 144.8 105 70.5
PSO017G2886 Papaver somniferum HOM05D006139 ORTHO05D007681 7.4e-33 144.1 104 66.3
Sc22g0003230 Simmondsia chinensis HOM05D006139 ORTHO05D007681 9.6e-33 143.7 105 67.6
Thecc.07G123700 Theobroma cacao HOM05D006139 ORTHO05D007681 9.6e-33 143.7 106 67.9
Hma1.2p1_0412F.1_g147150 Hydrangea macrophylla HOM05D006139 ORTHO05D007681 1.3e-32 143.3 106 64.2
CANSAT11G1108 Cannabis sativa HOM05D006139 ORTHO05D007681 2.8e-32 142.1 105 65.7
Aqoxy2G03950 Aquilegia oxysepala HOM05D006139 ORTHO05D007681 4.8e-32 141.4 106 67.0
Gohir.D01G041500 Gossypium hirsutum HOM05D006139 ORTHO05D007681 6.2e-32 141.0 106 65.1
Migut.N00440 Erythranthe guttata HOM05D006139 ORTHO05D007681 1.1e-31 140.2 105 63.8
Nitab4.5_0001526g0130 Nicotiana tabacum HOM05D006139 ORTHO05D007681 1.1e-31 140.2 105 62.9
Gohir.A01G052100 Gossypium hirsutum HOM05D006139 ORTHO05D007681 1.4e-31 139.8 106 65.1
PSO675G6876 Papaver somniferum HOM05D006139 ORTHO05D007681 1.4e-31 139.8 104 65.4
MSTRG.17865 Avicennia marina HOM05D006139 ORTHO05D007681 1.8e-31 139.4 106 66.0
THA.LOC104812308 Tarenaya hassleriana HOM05D006139 ORTHO05D007681 2.4e-31 139.0 105 67.6
Gorai.002G052100 Gossypium raimondii HOM05D006139 ORTHO05D007681 3.1e-31 138.7 106 64.2
SGA_v2.0_scaffold109G31142 Striga asiatica HOM05D006139 ORTHO05D007681 5.3e-31 137.9 106 62.3
QL10p044141 Quercus lobata HOM05D006139 ORTHO05D007681 9.0e-31 137.1 140 55.0
Zm00001eb116810 Zea mays HOM05D006139 ORTHO05D007681 3.4e-30 135.2 105 59.0
PGR031G2404 Punica granatum HOM05D006139 ORTHO05D007681 5.8e-30 134.4 105 62.9
ATR0609G005 Amborella trichopoda HOM05D006139 ORTHO05D007681 1.0e-29 133.7 106 57.5
Peaxi162Scf00286g00443 Petunia axillaris HOM05D006139 ORTHO05D007681 1.7e-29 132.9 105 61.0
Nitab4.5_0001687g0050 Nicotiana tabacum HOM05D006139 ORTHO05D007681 2.2e-29 132.5 105 61.0
Thhalv10007085m.g Eutrema salsugineum HOM05D006139 ORTHO05D007681 3.8e-29 131.7 104 63.5
Sp1g15110 Schrenkiella parvula HOM05D006139 ORTHO05D007681 4.9e-29 131.3 104 62.5
Rhsim07G0086500 Rhododendron simsii HOM05D006139 ORTHO05D007681 1.4e-28 129.8 132 53.0
Carub.0001s1670 Capsella rubella HOM05D006139 ORTHO05D007681 2.5e-28 129.0 104 61.5
AT1G16970 Arabidopsis thaliana HOM05D006139 ORTHO05D007681 3.2e-28 128.6 104 60.6
BcaC05g25552 Brassica carinata HOM05D006139 ORTHO05D007681 3.2e-28 128.6 104 60.6
C05p15280 Brassica napus HOM05D006139 ORTHO05D007681 3.2e-28 128.6 104 60.6
CARHR017480 Cardamine hirsuta HOM05D006139 ORTHO05D007681 4.2e-28 128.3 105 61.9
HPP92_015930 Vanilla planifolia HOM05D006139 ORTHO05D007681 4.2e-28 128.3 105 62.9
A06p12870 Brassica napus HOM05D006139 ORTHO05D007681 1.2e-27 126.7 104 59.6
DCAR_005496 Daucus carota HOM05D006139 ORTHO05D007681 1.2e-27 126.7 97 62.9
CDE02G2779 Ceratophyllum demersum HOM05D006139 ORTHO05D007681 2.1e-27 125.9 106 62.3
BcaB02g06659 Brassica carinata HOM05D006139 ORTHO05D007681 2.7e-27 125.6 104 60.6
AUR62003718 Chenopodium quinoa HOM05D006139 ORTHO05D007681 1.8e-26 122.9 110 59.1
SMO361G0769 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 6.9e-23 110.9 105 48.6
vmacro13984 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 9.0e-23 110.5 124 48.4
SMO361G0513 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 5.9e-22 107.8 106 48.1
Mapoly0113s0020 Marchantia polymorpha HOM05D006139 ORTHO05D007681 1.3e-21 106.7 107 48.6
AagrBONN_evm.TU.Sc2ySwM_228.1556 Anthoceros agrestis HOM05D006139 ORTHO05D007681 9.3e-20 100.5 104 48.1
CBR_g19434 Chara braunii HOM05D006139 ORTHO05D007681 9.3e-20 100.5 107 51.4
ClCG07G016640 Citrullus lanatus HOM05D006139 ORTHO05D007681 6.1e-19 97.8 97 54.6
Pp3c18_7140 Physcomitrium patens HOM05D006139 ORTHO05D007681 7.9e-19 97.4 105 48.6
HanXRQChr13g0406711 Helianthus annuus HOM05D006139 ORTHO05D007681 1.5e-17 93.2 58 75.9
Hund19684 Selenicereus undatus HOM05D006139 ORTHO05D007681 7.4e-17 90.9 104 51.0
CAN.G710.40 Capsicum annuum HOM05D006139 ORTHO05D007681 9.7e-17 90.5 106 47.2
BolC5t30234H Brassica oleracea HOM05D006139 ORTHO05D007681 1.3e-16 90.1 107 49.5
FAN12G0395 Fragaria x ananassa HOM05D006139 ORTHO05D007681 2.2e-16 89.4 106 50.9
BraA06t24447Z Brassica rapa HOM05D006139 ORTHO05D007681 6.3e-16 87.8 103 47.6
FAN07G2792 Fragaria x ananassa HOM05D006139 ORTHO05D007681 1.4e-15 86.7 106 50.9
COL.COLO4_17513 Corchorus olitorius HOM05D006139 ORTHO05D007681 2.4e-15 85.9 105 49.5
FAN17G0552 Fragaria x ananassa HOM05D006139 ORTHO05D007681 2.4e-15 85.9 106 50.9
MBI07_g00628_MAGBIO Magnolia biondii HOM05D006139 ORTHO05D007681 2.2e-13 79.3 104 47.1
AUR62018029 Chenopodium quinoa HOM05D006139 ORTHO05D007681 7.2e-12 74.3 111 45.0
Aa31LG7G1410 Aethionema arabicum HOM05D006139 ORTHO05D007681 7.4e-09 64.3 103 39.8
arahy.Tifrunner.gnm1.ann1.6RHH59 Arachis hypogaea HOM05D006139 ORTHO05D007681 9.1e-07 57.4 33 75.8
Cre13.g607500 Chlamydomonas reinhardtii HOM05D006139 ORTHO05D007681 3.4e-06 55.5 65 46.2


User provided reference genes

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