Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_02784_v3 Cicer arietinum L. HOM05D005460 ORTHO05D008059 4.2e-164 581.3 284 100.0
Medtr2g461560 Medicago truncatula HOM05D005460 ORTHO05D008059 2.8e-136 488.8 256 91.4
TPR.G14357 Trifolium pratense HOM05D005460 ORTHO05D008059 1.8e-135 486.1 256 91.0
Psat1g126760 Pisum sativum HOM05D005460 ORTHO05D008059 1.2e-134 483.4 256 91.0
Glyma.06G206000 Glycine max HOM05D005460 ORTHO05D008059 4.1e-127 458.4 253 87.4
Lj1g0006842 Lotus japonicus HOM05D005460 ORTHO05D008059 2.9e-125 452.2 254 86.6
arahy.Tifrunner.gnm1.ann1.LBS82T Arachis hypogaea HOM05D005460 ORTHO05D008059 3.2e-124 448.7 254 85.4
arahy.Tifrunner.gnm1.ann1.N0CKJ9 Arachis hypogaea HOM05D005460 ORTHO05D008059 4.2e-124 448.4 254 85.4
VMungo1309G0936 Vigna mungo HOM05D005460 ORTHO05D008059 5.5e-124 448.0 253 85.4
Lalb_Chr11g0071861 Lupinus albus HOM05D005460 ORTHO05D008059 6.1e-123 444.5 254 85.0
Phvul.009G203700 Phaseolus vulgaris HOM05D005460 ORTHO05D008059 1.5e-121 439.9 253 84.2
QL10p020708 Quercus lobata HOM05D005460 ORTHO05D008059 1.7e-109 399.8 254 75.6
CiPaw.15G113700 Carya illinoinensis HOM05D005460 ORTHO05D008059 3.2e-108 395.6 258 74.4
GSVIVG01008151001 Vitis vinifera HOM05D005460 ORTHO05D008059 2.7e-107 392.5 248 75.4
Dinv07972 Davidia involucrata HOM05D005460 ORTHO05D008059 3.6e-107 392.1 254 74.8
Haze_18509 Corylus avellana HOM05D005460 ORTHO05D008059 1.0e-106 390.6 258 72.5
Cfa017734 Carpinus fangiana HOM05D005460 ORTHO05D008059 8.8e-106 387.5 258 71.7
HanXRQChr09g0270461 Helianthus annuus HOM05D005460 ORTHO05D008059 1.2e-105 387.1 254 72.0
TWI60G0358 Tripterygium wilfordii HOM05D005460 ORTHO05D008059 1.5e-105 386.7 260 71.2
TWI60G1488 Tripterygium wilfordii HOM05D005460 ORTHO05D008059 1.5e-105 386.7 260 71.2
Hma1.2p1_2037F.1_g311990 Hydrangea macrophylla HOM05D005460 ORTHO05D008059 4.4e-105 385.2 262 70.6
TAR629G3051 Trochodendron aralioides HOM05D005460 ORTHO05D008059 4.4e-105 385.2 265 70.6
Cpa.g.sc3.237 Carica papaya HOM05D005460 ORTHO05D008059 9.8e-105 384.0 248 74.2
Manes.06G081200 Manihot esculenta HOM05D005460 ORTHO05D008059 9.8e-105 384.0 259 72.2
Oeu005512.2 Olea europaea HOM05D005460 ORTHO05D008059 2.2e-104 382.9 259 72.6
Hma1.2p1_3034F.1_g331890 Hydrangea macrophylla HOM05D005460 ORTHO05D008059 2.8e-104 382.5 248 73.0
Lj9A438G54 Lonicera japonica HOM05D005460 ORTHO05D008059 2.8e-104 382.5 254 72.0
Thecc.03G107700 Theobroma cacao HOM05D005460 ORTHO05D008059 2.8e-104 382.5 258 71.7
Actinidia04798 Actinidia chinensis HOM05D005460 ORTHO05D008059 4.9e-104 381.7 259 71.0
ECA232G2972 Erigeron canadensis HOM05D005460 ORTHO05D008059 6.3e-104 381.3 254 71.3
Sc04g0003880 Simmondsia chinensis HOM05D005460 ORTHO05D008059 1.1e-103 380.6 253 71.9
CSS0025897 Camellia sinensis var. sinensis HOM05D005460 ORTHO05D008059 1.4e-103 380.2 259 71.4
Ciclev10018555m.g Citrus clementina HOM05D005460 ORTHO05D008059 1.4e-103 380.2 250 72.8
Cc04_g08300 Coffea canephora HOM05D005460 ORTHO05D008059 3.1e-103 379.0 248 73.8
Eucgr.K02548 Eucalyptus grandis HOM05D005460 ORTHO05D008059 4.1e-103 378.6 252 73.8
MELO3C017248.2 Cucumis melo HOM05D005460 ORTHO05D008059 7.0e-103 377.9 255 71.0
CsaV3_1G003350 Cucumis sativus L. HOM05D005460 ORTHO05D008059 7.0e-103 377.9 255 71.0
Hund09954 Selenicereus undatus HOM05D005460 ORTHO05D008059 1.2e-102 377.1 254 70.1
ClCG06G015450 Citrullus lanatus HOM05D005460 ORTHO05D008059 2.7e-102 375.9 260 70.0
COL.COLO4_27492 Corchorus olitorius HOM05D005460 ORTHO05D008059 2.7e-102 375.9 254 70.5
SGA_v2.0_scaffold25G10948 Striga asiatica HOM05D005460 ORTHO05D008059 3.5e-102 375.6 249 71.5
DCAR_011574 Daucus carota HOM05D005460 ORTHO05D008059 5.9e-102 374.8 262 68.3
Gorai.007G040200 Gossypium raimondii HOM05D005460 ORTHO05D008059 5.9e-102 374.8 254 70.1
THA.LOC104818356 Tarenaya hassleriana HOM05D005460 ORTHO05D008059 1.3e-101 373.6 250 71.2
Migut.I00363 Erythranthe guttata HOM05D005460 ORTHO05D008059 6.6e-101 371.3 254 70.9
MBI16_g07042_MAGBIO Magnolia biondii HOM05D005460 ORTHO05D008059 8.6e-101 370.9 252 71.4
Nn3g17530 Nelumbo nucifera HOM05D005460 ORTHO05D008059 8.6e-101 370.9 254 69.7
Lsat_1_v5_gn_4_113721 Lactuca sativa HOM05D005460 ORTHO05D008059 1.1e-100 370.5 265 67.2
MSTRG.22948 Avicennia marina HOM05D005460 ORTHO05D008059 3.3e-100 369.0 254 68.9
Peaxi162Scf00017g03272 Petunia axillaris HOM05D005460 ORTHO05D008059 5.6e-100 368.2 254 69.3
CANSAT80G0202 Cannabis sativa HOM05D005460 ORTHO05D008059 7.2e-100 367.9 258 69.4
AUR62032136 Chenopodium quinoa HOM05D005460 ORTHO05D008059 1.2e-99 367.1 248 69.8
CSS0043223 Camellia sinensis var. sinensis HOM05D005460 ORTHO05D008059 2.1e-99 366.3 260 69.2
AUR62039669 Chenopodium quinoa HOM05D005460 ORTHO05D008059 2.8e-99 365.9 248 69.8
Zm00001eb327130 Zea mays HOM05D005460 ORTHO05D008059 6.1e-99 364.8 248 71.8
Sed0020336 Sechium edule HOM05D005460 ORTHO05D008059 8.0e-99 364.4 255 68.2
Nitab4.5_0005994g0060 Nicotiana tabacum HOM05D005460 ORTHO05D008059 1.8e-98 363.2 259 67.2
PSO478G1652 Papaver somniferum HOM05D005460 ORTHO05D008059 1.8e-98 363.2 254 69.3
BraA10t44905Z Brassica rapa HOM05D005460 ORTHO05D008059 2.3e-98 362.8 251 69.3
Sopen03g033860 Solanum pennellii HOM05D005460 ORTHO05D008059 2.3e-98 362.8 254 68.5
Thhalv10012480m.g Eutrema salsugineum HOM05D005460 ORTHO05D008059 3.0e-98 362.5 251 69.7
Sp6g34850 Schrenkiella parvula HOM05D005460 ORTHO05D008059 3.0e-98 362.5 251 69.3
PGSC0003DMG400024525 Solanum tuberosum HOM05D005460 ORTHO05D008059 3.0e-98 362.5 254 67.7
Rhsim08G0141800 Rhododendron simsii HOM05D005460 ORTHO05D008059 5.2e-98 361.7 259 68.3
RcHm_v2.0_Chr7g0183711 Rosa chinensis HOM05D005460 ORTHO05D008059 8.9e-98 360.9 254 68.5
Aa31LG3G18430 Aethionema arabicum HOM05D005460 ORTHO05D008059 1.2e-97 360.5 251 68.9
Solyc03g114780.3 Solanum lycopersicum HOM05D005460 ORTHO05D008059 1.2e-97 360.5 254 68.1
Carub.0006s0699 Capsella rubella HOM05D005460 ORTHO05D008059 1.5e-97 360.1 251 68.9
CARHR205080 Cardamine hirsuta HOM05D005460 ORTHO05D008059 1.5e-97 360.1 251 68.5
BolC9t59631H Brassica oleracea HOM05D005460 ORTHO05D008059 2.0e-97 359.8 251 68.5
C09p68840 Brassica napus HOM05D005460 ORTHO05D008059 3.4e-97 359.0 251 68.5
EL10Ac5g11188 Beta vulgaris HOM05D005460 ORTHO05D008059 5.7e-97 358.2 254 66.5
SHI17428 Sapria himalayana HOM05D005460 ORTHO05D008059 5.7e-97 358.2 248 68.5
A10p28560 Brassica napus HOM05D005460 ORTHO05D008059 9.8e-97 357.5 251 68.9
BcaB08g37287 Brassica carinata HOM05D005460 ORTHO05D008059 1.7e-96 356.7 249 69.1
AT5G08110 Arabidopsis thaliana HOM05D005460 ORTHO05D008059 2.2e-96 356.3 254 67.7
FvH4_5g13410 Fragaria vesca HOM05D005460 ORTHO05D008059 8.3e-96 354.4 259 67.2
ATR0827G052 Amborella trichopoda HOM05D005460 ORTHO05D008059 1.8e-95 353.2 259 64.5
FAN08G0483 Fragaria x ananassa HOM05D005460 ORTHO05D008059 1.8e-95 353.2 252 66.7
AL6G18480 Arabidopsis lyrata HOM05D005460 ORTHO05D008059 7.0e-95 351.3 251 67.7
FAN18G2313 Fragaria x ananassa HOM05D005460 ORTHO05D008059 3.5e-94 349.0 250 67.6
MD14G1216300 Malus domestica HOM05D005460 ORTHO05D008059 7.8e-94 347.8 265 62.6
Aqoxy3G00547_Aqoxy3G00548 Aquilegia oxysepala HOM05D005460 ORTHO05D008059 1.1e-92 344.0 254 66.9
Prupe.5G209800 Prunus persica HOM05D005460 ORTHO05D008059 7.3e-92 341.3 259 64.9
HPP92_007735 Vanilla planifolia HOM05D005460 ORTHO05D008059 1.6e-91 340.1 247 66.4
SEGI_08899 Sequoiadendron giganteum HOM05D005460 ORTHO05D008059 8.9e-90 334.3 263 61.6
Os02g0111900 Oryza sativa ssp. japonica HOM05D005460 ORTHO05D008059 2.2e-88 329.7 246 65.0
AagrBONN_evm.TU.Sc2ySwM_344.3544 Anthoceros agrestis HOM05D005460 ORTHO05D008059 2.4e-87 326.2 264 58.3
Pp3c5_22230 Physcomitrium patens HOM05D005460 ORTHO05D008059 7.3e-84 314.7 256 58.2
Duzib068G0250 Durio zibethinus HOM05D005460 ORTHO05D008059 9.5e-84 314.3 254 61.4
SMO203G0199 Selaginella moellendorffii HOM05D005460 ORTHO05D008059 1.2e-83 313.9 262 58.0
Gohir.D11G037400 Gossypium hirsutum HOM05D005460 ORTHO05D008059 2.3e-82 309.7 254 60.6
Gohir.A11G034000 Gossypium hirsutum HOM05D005460 ORTHO05D008059 1.2e-81 307.4 254 60.2
vmacro17637 Vaccinium macrocarpon HOM05D005460 ORTHO05D008059 7.5e-81 304.7 337 50.1
Potri.012G063500 Populus trichocarpa HOM05D005460 ORTHO05D008059 1.6e-78 297.0 218 66.1
PGR031G2062 Punica granatum HOM05D005460 ORTHO05D008059 4.6e-78 295.4 203 70.9
Prupe.5G209300 Prunus persica HOM05D005460 ORTHO05D008059 3.0e-77 292.7 257 58.0
CBR_g50975 Chara braunii HOM05D005460 ORTHO05D008059 1.1e-76 290.8 254 54.3
vmacro23112 Vaccinium macrocarpon HOM05D005460 ORTHO05D008059 3.6e-67 259.2 291 50.9
MCO09G659 Micromonas commoda HOM05D005460 ORTHO05D008059 1.8e-58 230.3 247 49.4
PRCOL_00000536 Prasinoderma coloniale HOM05D005460 ORTHO05D008059 1.2e-46 191.0 252 44.4
Psat0s3496g0160 Pisum sativum HOM05D001876 ORTHO05D002002 5.6e-44 182.2 96 88.5
Cre03.g187700 Chlamydomonas reinhardtii HOM05D005460 ORTHO05D008059 1.4e-39 167.5 430 28.1
AagrBONN_evm.TU.Sc2ySwM_344.4214 Anthoceros agrestis HOM05D005460 ORTHO05D008059 7.4e-36 155.2 246 35.0
Pp3c7_15450 Physcomitrium patens HOM05D005460 ORTHO05D008059 1.4e-34 151.0 249 35.7
Pp3c7_15456 Physcomitrium patens HOM05D005460 ORTHO05D008059 1.4e-34 151.0 249 35.7
Pp3s405_10 Physcomitrium patens HOM05D005460 ORTHO05D008059 5.9e-33 145.6 236 34.7
MCO07G109 Micromonas commoda HOM05D005460 ORTHO05D008059 5.0e-32 142.5 224 37.1
Nitab4.5_0002467g0140 Nicotiana tabacum HOM05D005460 ORTHO05D008059 6.5e-32 142.1 103 63.1
FAN13G2142 Fragaria x ananassa HOM05D005460 ORTHO05D008059 1.1e-26 124.8 72 79.2
Potri.012G063201 Populus trichocarpa HOM05D005460 ORTHO05D008059 2.3e-13 80.5 68 54.4
Lsat_1_v5_gn_1_69000 Lactuca sativa HOM05D005460 ORTHO05D048358 5.7e-12 75.9 46 78.3
Cfa022214 Carpinus fangiana HOM05D005460 ORTHO05D124255 2.7e-06 57.0 84 36.9


User provided reference genes

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