Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0039016 Camellia sinensis var. sinensis HOM05D002182 ORTHO05D004671 2.2e-69 265.4 123 100.0
Actinidia20028 Actinidia chinensis HOM05D002182 ORTHO05D004671 1.2e-38 163.3 79 89.9
Dinv35485 Davidia involucrata HOM05D002182 ORTHO05D004671 1.5e-38 162.9 79 88.6
SGA_v2.0_scaffold54G19590 Striga asiatica HOM05D002182 ORTHO05D004671 2.6e-38 162.2 94 77.7
Rhsim10G0124100 Rhododendron simsii HOM05D002182 ORTHO05D004671 2.2e-37 159.1 79 87.3
Migut.H00803 Erythranthe guttata HOM05D002182 ORTHO05D004671 2.9e-37 158.7 80 83.8
Sc16g0009510 Simmondsia chinensis HOM05D002182 ORTHO05D004671 8.4e-37 157.1 76 89.5
vmacro12745 Vaccinium macrocarpon HOM05D002182 ORTHO05D004671 2.4e-36 155.6 84 84.5
AUR62000512 Chenopodium quinoa HOM05D002182 ORTHO05D004671 1.2e-35 153.3 91 74.7
EL10Ac4g09621 Beta vulgaris HOM05D002182 ORTHO05D004671 1.6e-35 152.9 95 72.6
TAR376G0522 Trochodendron aralioides HOM05D002182 ORTHO05D004671 7.9e-35 150.6 79 81.0
Aqoxy5G02289 Aquilegia oxysepala HOM05D002182 ORTHO05D004671 1.3e-34 149.8 79 82.3
PGR102G1182 Punica granatum HOM05D002182 ORTHO05D004671 3.0e-34 148.7 90 75.6
Cfa002178 Carpinus fangiana HOM05D002182 ORTHO05D004671 6.7e-34 147.5 90 70.0
Cc07_g19240 Coffea canephora HOM05D002182 ORTHO05D004671 1.1e-33 146.7 80 76.2
CANSAT01G2275 Cannabis sativa HOM05D002182 ORTHO05D004671 4.3e-33 144.8 90 68.9
MELO3C009682.2 Cucumis melo HOM05D002182 ORTHO05D004671 4.3e-33 144.8 90 68.9
CsaV3_3G039390 Cucumis sativus L. HOM05D002182 ORTHO05D004671 4.3e-33 144.8 90 68.9
RcHm_v2.0_Chr2g0122231 Rosa chinensis HOM05D002182 ORTHO05D004671 4.3e-33 144.8 97 62.9
Sopen05g009910 Solanum pennellii HOM05D002182 ORTHO05D004671 4.3e-33 144.8 80 77.5
CiPaw.04G079900 Carya illinoinensis HOM05D002182 ORTHO05D004671 5.6e-33 144.4 90 67.8
Lsat_1_v5_gn_1_78841 Lactuca sativa HOM05D002182 ORTHO05D004671 5.6e-33 144.4 109 57.8
Psat5g060640 Pisum sativum HOM05D002182 ORTHO05D004671 9.6e-33 143.7 90 72.2
CAN.G163.2 Capsicum annuum HOM05D002182 ORTHO05D004671 1.3e-32 143.3 80 77.5
Atru.chr4.980 Acer truncatum HOM05D002182 ORTHO05D004671 1.6e-32 142.9 91 65.9
HanXRQChr01g0016921 Helianthus annuus HOM05D002182 ORTHO05D004671 2.1e-32 142.5 92 66.3
Phvul.009G154850 Phaseolus vulgaris HOM05D002182 ORTHO05D004671 2.1e-32 142.5 90 68.9
Eucgr.H05141 Eucalyptus grandis HOM05D002182 ORTHO05D004671 2.8e-32 142.1 90 68.9
Nn5g28440 Nelumbo nucifera HOM05D002182 ORTHO05D004671 3.7e-32 141.7 78 79.5
HPP92_005917 Vanilla planifolia HOM05D002182 ORTHO05D004671 4.8e-32 141.4 82 75.6
Ca_16979_v3 Cicer arietinum L. HOM05D002182 ORTHO05D004671 6.2e-32 141.0 90 70.0
TPR.G33581 Trifolium pratense HOM05D002182 ORTHO05D004671 6.2e-32 141.0 90 68.9
Ah.06g191010 Amaranthus hybridus HOM05D002617 ORTHO05D009035 8.2e-32 140.6 78 75.6
Ah.06g191020 Amaranthus hybridus HOM05D002182 ORTHO05D004671 8.2e-32 140.6 78 75.6
VMungo1309G0220 Vigna mungo HOM05D002182 ORTHO05D004671 8.2e-32 140.6 90 66.7
FvH4_1g24710 Fragaria vesca HOM05D002182 ORTHO05D004671 1.1e-31 140.2 97 61.9
ATR1001G007 Amborella trichopoda HOM05D002182 ORTHO05D004671 1.4e-31 139.8 99 61.6
MD15G1134700 Malus domestica HOM05D002182 ORTHO05D004671 1.4e-31 139.8 90 67.8
Prupe.4G275500 Prunus persica HOM05D002182 ORTHO05D004671 1.4e-31 139.8 90 67.8
Lalb_Chr11g0068591 Lupinus albus HOM05D002182 ORTHO05D004671 1.8e-31 139.4 90 65.6
Medtr3g096640 Medicago truncatula HOM05D002182 ORTHO05D004671 1.8e-31 139.4 90 67.8
Potri.005G067100 Populus trichocarpa HOM05D002182 ORTHO05D004671 1.8e-31 139.4 90 64.4
Lj1g0008046 Lotus japonicus HOM05D002182 ORTHO05D004671 2.4e-31 139.0 116 55.2
Sabra05G0055200 Salix brachista HOM05D002182 ORTHO05D004671 2.4e-31 139.0 90 64.4
Duzib264G0915 Durio zibethinus HOM05D002182 ORTHO05D004671 4.0e-31 138.3 73 75.3
Ciclev10003112m.g Citrus clementina HOM05D002182 ORTHO05D004671 5.3e-31 137.9 90 65.6
Gohir.A11G057700 Gossypium hirsutum HOM05D002182 ORTHO05D004671 5.3e-31 137.9 90 63.3
Thecc.01G137400 Theobroma cacao HOM05D002182 ORTHO05D004671 5.3e-31 137.9 90 63.3
GSVIVG01026461001 Vitis vinifera HOM05D002182 ORTHO05D004671 5.3e-31 137.9 73 79.5
COL.COLO4_35815 Corchorus olitorius HOM05D002182 ORTHO05D004671 6.9e-31 137.5 90 63.3
Glyma.06G155600 Glycine max HOM05D002182 ORTHO05D004671 6.9e-31 137.5 90 66.7
Hund21801 Selenicereus undatus HOM05D002182 ORTHO05D004671 9.0e-31 137.1 97 68.0
ClCG10G017010 Citrullus lanatus HOM05D002182 ORTHO05D004671 1.2e-30 136.7 95 62.1
arahy.Tifrunner.gnm1.ann1.K5KUZ3 Arachis hypogaea HOM05D002182 ORTHO05D004671 2.6e-30 135.6 90 64.4
Manes.13G078050 Manihot esculenta HOM05D002182 ORTHO05D004671 2.6e-30 135.6 73 72.6
Nitab4.5_0001277g0010 Nicotiana tabacum HOM05D002182 ORTHO05D004671 2.6e-30 135.6 81 70.4
TWI79G1433 Tripterygium wilfordii HOM05D002182 ORTHO05D004671 2.6e-30 135.6 90 64.4
Gohir.D11G061900 Gossypium hirsutum HOM05D002182 ORTHO05D004671 3.4e-30 135.2 90 62.2
Sed0010212 Sechium edule HOM05D002182 ORTHO05D004671 4.5e-30 134.8 73 74.0
arahy.Tifrunner.gnm1.ann1.XVSB6Y Arachis hypogaea HOM05D002182 ORTHO05D004671 7.6e-30 134.0 78 71.8
Zm00001eb005010 Zea mays HOM05D002182 ORTHO05D004671 1.0e-29 133.7 96 60.4
AT5G63920 Arabidopsis thaliana HOM05D002182 ORTHO05D004671 2.9e-29 132.1 103 57.3
PSO384G2582 Papaver somniferum HOM05D002182 ORTHO05D004671 3.8e-29 131.7 80 68.8
PSO443G0075 Papaver somniferum HOM05D002182 ORTHO05D004671 4.9e-29 131.3 80 67.5
FAN23G2071 Fragaria x ananassa HOM05D002182 ORTHO05D004671 1.1e-28 130.2 85 64.7
Aa31LG1G17970 Aethionema arabicum HOM05D002182 ORTHO05D004671 1.9e-28 129.4 91 59.3
BcaB07g29709 Brassica carinata HOM05D002182 ORTHO05D004671 1.9e-28 129.4 91 57.1
AL8G41160 Arabidopsis lyrata HOM05D002182 ORTHO05D004671 2.5e-28 129.0 91 60.4
Sp2g26990 Schrenkiella parvula HOM05D002182 ORTHO05D004671 3.2e-28 128.6 86 60.5
BcaC03g18232 Brassica carinata HOM05D002182 ORTHO05D004671 5.5e-28 127.9 91 56.0
Carub.0008s2470 Capsella rubella HOM05D002182 ORTHO05D004671 5.5e-28 127.9 91 60.4
THA.LOC104818422 Tarenaya hassleriana HOM05D002182 ORTHO05D004671 5.5e-28 127.9 71 73.2
A02p43050 Brassica napus HOM05D002182 ORTHO05D004671 1.6e-27 126.3 91 56.0
BraA02t09226Z Brassica rapa HOM05D002182 ORTHO05D004671 1.6e-27 126.3 91 56.0
Thhalv10003618m.g Eutrema salsugineum HOM05D002182 ORTHO05D004671 1.6e-27 126.3 103 53.4
Gorai.007G066700 Gossypium raimondii HOM05D002182 ORTHO05D004671 1.6e-27 126.3 109 52.3
ECA248G2894 Erigeron canadensis HOM05D002182 ORTHO05D004671 6.0e-27 124.4 92 55.4
Os03g0165000 Oryza sativa ssp. japonica HOM05D002182 ORTHO05D004671 1.8e-26 122.9 79 64.6
CSS0041549 Camellia sinensis var. sinensis HOM05D002182 ORTHO05D004671 8.7e-26 120.6 79 75.9
Mapoly0113s0011 Marchantia polymorpha HOM05D002182 ORTHO05D004671 1.9e-25 119.4 90 55.6
AagrBONN_evm.TU.Sc2ySwM_228.5819 Anthoceros agrestis HOM05D002182 ORTHO05D004671 1.2e-22 110.2 81 55.6
Pp3c21_9710 Physcomitrium patens HOM05D002182 ORTHO05D004671 7.6e-22 107.5 93 54.8
unitig_62.g23375 Utricularia gibba HOM05D002182 ORTHO05D004671 2.5e-20 102.4 52 80.8
Lj4C830T7 Lonicera japonica HOM05D002182 ORTHO05D004671 2.1e-19 99.4 52 80.8
SMO114G0082 Selaginella moellendorffii HOM05D002182 ORTHO05D004671 7.9e-19 97.4 67 55.2
DCAR_023889 Daucus carota HOM05D002182 ORTHO05D004671 6.7e-18 94.4 63 65.1
FAN26G3457 Fragaria x ananassa HOM05D002182 ORTHO05D004671 1.9e-17 92.8 53 73.6
AUR62006857 Chenopodium quinoa HOM05D002182 ORTHO05D004671 3.3e-17 92.0 95 49.5
FAN19G2097 Fragaria x ananassa HOM05D002182 ORTHO05D004671 6.9e-15 84.3 91 45.1
SEGI_40414 Sequoiadendron giganteum HOM05D002182 ORTHO05D004671 1.0e-13 80.5 54 61.1
MBI07_g43314_MAGBIO Magnolia biondii HOM05D002182 ORTHO05D004671 6.7e-10 67.8 106 37.7
Hma1.2p1_2528F.1_g323950 Hydrangea macrophylla HOM05D002182 ORTHO05D004671 8.2e-08 60.8 61 52.5
SHI36071 Sapria himalayana HOM05D002182 ORTHO05D004671 8.2e-08 60.8 39 66.7
QL10p041326 Quercus lobata HOM05D002182 ORTHO05D004671 3.4e-06 55.5 44 54.5


User provided reference genes

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