Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0037562 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D003467 9.2e-93 343.6 178 100.0
CSS0021251 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D003467 1.4e-77 293.1 178 89.3
CSS0029706 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D003467 2.9e-70 268.9 173 86.1
CSS0032982 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D003467 2.4e-64 249.2 153 88.2
vmacro11232 Vaccinium macrocarpon HOM05D000104 ORTHO05D003467 5.1e-59 231.5 153 79.7
Cc08_g00060 Coffea canephora HOM05D000104 ORTHO05D003467 9.6e-58 227.3 153 78.4
Hma1.2p1_0392F.1_g143010 Hydrangea macrophylla HOM05D000104 ORTHO05D003467 3.6e-57 225.3 153 75.8
GSVIVG01035901001 Vitis vinifera HOM05D000104 ORTHO05D003467 6.2e-57 224.6 153 73.2
CiPaw.08G007100 Carya illinoinensis HOM05D000104 ORTHO05D003467 1.4e-56 223.4 153 73.9
Manes.03G010400 Manihot esculenta HOM05D000104 ORTHO05D003467 1.8e-56 223.0 153 73.9
Eucgr.G00556 Eucalyptus grandis HOM05D000104 ORTHO05D003467 4.0e-56 221.9 153 75.8
ClCG05G016460 Citrullus lanatus HOM05D000104 ORTHO05D003467 5.3e-56 221.5 153 74.5
CSS0003293 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D003467 2.6e-55 219.2 153 77.1
Rhsim02G0208200 Rhododendron simsii HOM05D000104 ORTHO05D003467 4.5e-55 218.4 168 72.0
Ciclev10010331m.g Citrus clementina HOM05D000104 ORTHO05D003467 2.2e-54 216.1 153 73.2
Manes.16G127700 Manihot esculenta HOM05D000104 ORTHO05D003467 2.2e-54 216.1 154 73.4
Sed0013682 Sechium edule HOM05D000104 ORTHO05D003467 3.8e-54 215.3 153 73.9
Oeu056768.1 Olea europaea HOM05D000104 ORTHO05D003467 4.9e-54 214.9 156 69.9
PGR044G1954 Punica granatum HOM05D000104 ORTHO05D003467 4.9e-54 214.9 153 73.9
Gohir.D07G035100 Gossypium hirsutum HOM05D000104 ORTHO05D003467 6.4e-54 214.5 153 71.2
Gorai.001G036900 Gossypium raimondii HOM05D000104 ORTHO05D003467 6.4e-54 214.5 153 71.2
Dinv16472 Davidia involucrata HOM05D000104 ORTHO05D003467 8.4e-54 214.2 153 73.9
Potri.006G262200 Populus trichocarpa HOM05D000104 ORTHO05D003467 1.4e-53 213.4 157 72.6
Haze_21436 Corylus avellana HOM05D000104 ORTHO05D003467 1.9e-53 213.0 153 71.2
Sc09g0010480 Simmondsia chinensis HOM05D000104 ORTHO05D003467 2.4e-53 212.6 153 70.6
EL10Ac2g04134 Beta vulgaris HOM05D000104 ORTHO05D003467 3.2e-53 212.2 154 70.1
Duzib150G0247 Durio zibethinus HOM05D000104 ORTHO05D003467 3.2e-53 212.2 153 69.3
Oeu012636.1 Olea europaea HOM05D000104 ORTHO05D003467 4.2e-53 211.8 153 71.2
Rhsim07G0163100 Rhododendron simsii HOM05D000104 ORTHO05D003467 5.4e-53 211.5 155 72.9
Ah.10g035570 Amaranthus hybridus HOM05D000104 ORTHO05D003467 7.1e-53 211.1 153 71.9
Potri.018G021100 Populus trichocarpa HOM05D000104 ORTHO05D003467 7.1e-53 211.1 158 70.3
Sabra18G0023400 Salix brachista HOM05D000104 ORTHO05D003467 1.2e-52 210.3 153 71.2
Thecc.09G017400 Theobroma cacao HOM05D000104 ORTHO05D003467 1.2e-52 210.3 153 68.6
Sabra06G0204500 Salix brachista HOM05D000104 ORTHO05D003467 2.1e-52 209.5 157 72.0
Prupe.1G391600 Prunus persica HOM05D000104 ORTHO05D003467 3.5e-52 208.8 153 68.6
Hund03464 Selenicereus undatus HOM05D000104 ORTHO05D003467 3.5e-52 208.8 153 70.6
TWI63G1656 Tripterygium wilfordii HOM05D000104 ORTHO05D003467 3.5e-52 208.8 153 69.9
Nn2g12306 Nelumbo nucifera HOM05D000104 ORTHO05D003467 6.0e-52 208.0 153 71.2
Oeu000758.1 Olea europaea HOM05D000104 ORTHO05D003467 1.0e-51 207.2 153 69.3
MSTRG.11592 Avicennia marina HOM05D000104 ORTHO05D003467 1.3e-51 206.8 153 69.9
Nitab4.5_0002973g0030 Nicotiana tabacum HOM05D000104 ORTHO05D003467 1.3e-51 206.8 155 72.3
TAR625G0155 Trochodendron aralioides HOM05D000104 ORTHO05D003467 1.3e-51 206.8 153 69.9
MELO3C016973.2 Cucumis melo HOM05D000104 ORTHO05D003467 2.3e-51 206.1 153 70.6
TWI32G0850 Tripterygium wilfordii HOM05D000104 ORTHO05D003467 3.9e-51 205.3 153 70.6
COL.COLO4_18937 Corchorus olitorius HOM05D000104 ORTHO05D003467 5.1e-51 204.9 153 67.3
Sed0022321 Sechium edule HOM05D000104 ORTHO05D003467 6.7e-51 204.5 153 71.9
QL02p019684 Quercus lobata HOM05D000104 ORTHO05D003467 8.7e-51 204.1 153 69.9
arahy.Tifrunner.gnm1.ann1.QU94QB Arachis hypogaea HOM05D000104 ORTHO05D003467 1.1e-50 203.8 153 69.9
AUR62031587 Chenopodium quinoa HOM05D000104 ORTHO05D003467 1.1e-50 203.8 156 66.7
CsaV3_4G036700 Cucumis sativus L. HOM05D000104 ORTHO05D003467 1.1e-50 203.8 153 69.9
Migut.A00006 Erythranthe guttata HOM05D000104 ORTHO05D003467 1.5e-50 203.4 153 69.9
AUR62012463 Chenopodium quinoa HOM05D000104 ORTHO05D003467 4.3e-50 201.8 156 66.0
Nitab4.5_0000486g0110 Nicotiana tabacum HOM05D000104 ORTHO05D003467 4.3e-50 201.8 155 71.0
Lj7A730T43 Lonicera japonica HOM05D000104 ORTHO05D003467 5.6e-50 201.4 157 70.1
RcHm_v2.0_Chr6g0299661 Rosa chinensis HOM05D000104 ORTHO05D003467 5.6e-50 201.4 157 67.5
vmacro05141 Vaccinium macrocarpon HOM05D000104 ORTHO05D003467 5.6e-50 201.4 153 69.9
Hund19597 Selenicereus undatus HOM05D000104 ORTHO05D003467 9.6e-50 200.7 155 67.1
Nitab4.5_0002503g0110 Nicotiana tabacum HOM05D000104 ORTHO05D003467 1.3e-49 200.3 158 65.8
THA.LOC104803635 Tarenaya hassleriana HOM05D000104 ORTHO05D003467 1.6e-49 199.9 153 67.3
FvH4_2g40920 Fragaria vesca HOM05D005818 ORTHO05D003467 2.1e-49 199.5 157 68.2
Glyma.06G063400 Glycine max HOM05D000104 ORTHO05D003467 4.8e-49 198.4 153 66.7
FAN20G2022 Fragaria x ananassa HOM05D000104 ORTHO05D003467 6.2e-49 198.0 157 68.2
FAN27G0005 Fragaria x ananassa HOM05D000104 ORTHO05D003467 8.1e-49 197.6 157 68.2
Cpa.g.sc127.15 Carica papaya HOM05D000104 ORTHO05D003467 1.1e-48 197.2 153 69.3
HanXRQChr11g0353801 Helianthus annuus HOM05D000104 ORTHO05D003467 1.1e-48 197.2 153 68.6
Gohir.A13G179800 Gossypium hirsutum HOM05D000104 ORTHO05D003467 1.8e-48 196.4 153 68.6
Solyc06g065730.3 Solanum lycopersicum HOM05D000104 ORTHO05D003467 1.8e-48 196.4 153 66.7
Sopen06g024260 Solanum pennellii HOM05D000104 ORTHO05D003467 1.8e-48 196.4 153 66.7
Gohir.D13G187900 Gossypium hirsutum HOM05D000104 ORTHO05D003467 3.1e-48 195.7 153 68.6
Gorai.010G244100 Gossypium raimondii HOM05D000104 ORTHO05D003467 3.1e-48 195.7 153 68.6
FAN15G1888 Fragaria x ananassa HOM05D000104 ORTHO05D003467 6.9e-48 194.5 156 67.3
Glyma.04G062400 Glycine max HOM05D000104 ORTHO05D003467 6.9e-48 194.5 153 66.0
MD15G1037700 Malus domestica HOM05D000104 ORTHO05D003467 1.2e-47 193.7 155 65.8
MD08G1058800 Malus domestica HOM05D000104 ORTHO05D003467 2.0e-47 193.0 155 65.2
RcHm_v2.0_Chr3g0455421 Rosa chinensis HOM05D000104 ORTHO05D003467 2.0e-47 193.0 158 65.8
Ca_15766_v3 Cicer arietinum L. HOM05D000104 ORTHO05D003467 9.9e-47 190.7 153 66.0
Actinidia22307 Actinidia chinensis HOM05D000104 ORTHO05D003467 1.3e-46 190.3 155 71.0
ECA248G2891 Erigeron canadensis HOM05D000104 ORTHO05D003467 1.3e-46 190.3 153 67.3
Lalb_Chr08g0244361 Lupinus albus HOM05D000104 ORTHO05D003467 1.7e-46 189.9 153 64.1
HanXRQChr01g0030671 Helianthus annuus HOM05D000104 ORTHO05D003467 2.2e-46 189.5 153 68.0
Phvul.009G088700 Phaseolus vulgaris HOM05D000104 ORTHO05D003467 2.9e-46 189.1 155 65.2
CAN.G199.65 Capsicum annuum HOM05D000104 ORTHO05D003467 3.8e-46 188.7 153 66.0
TPR.G3131 Trifolium pratense HOM05D000104 ORTHO05D003467 4.9e-46 188.3 153 66.0
Aa31sc100G10 Aethionema arabicum HOM05D000104 ORTHO05D003467 6.4e-46 188.0 153 64.7
Aqoxy2G02630 Aquilegia oxysepala HOM05D000104 ORTHO05D003467 6.4e-46 188.0 155 64.5
Lsat_1_v5_gn_1_42900 Lactuca sativa HOM05D000104 ORTHO05D003467 1.1e-45 187.2 153 67.3
Ah.16g104930 Amaranthus hybridus HOM05D000104 ORTHO05D003467 1.4e-45 186.8 174 60.3
Peaxi162Scf00632g00012 Petunia axillaris HOM05D000104 ORTHO05D003467 1.9e-45 186.4 155 67.7
SGA_v2.0_scaffold20G09081 Striga asiatica HOM05D000104 ORTHO05D003467 1.9e-45 186.4 158 62.7
Medtr3g106210 Medicago truncatula HOM05D000104 ORTHO05D003467 7.1e-45 184.5 154 65.6
THA.LOC104803854 Tarenaya hassleriana HOM05D000104 ORTHO05D003467 9.3e-45 184.1 158 62.7
Gohir.A07G031300 Gossypium hirsutum HOM05D000104 ORTHO05D003467 1.6e-44 183.3 153 64.7
AT2G25170 Arabidopsis thaliana HOM05D000104 ORTHO05D003467 2.1e-44 183.0 153 64.7
DCAR_003002 Daucus carota HOM05D000104 ORTHO05D003467 2.7e-44 182.6 158 63.9
Lalb_Chr23g0268291 Lupinus albus HOM05D000104 ORTHO05D003467 2.7e-44 182.6 153 61.4
Atru.chr7.2524 Acer truncatum HOM05D000104 ORTHO05D003467 6.0e-44 181.4 155 65.8
Peaxi162Scf00430g00415 Petunia axillaris HOM05D000104 ORTHO05D003467 7.9e-44 181.0 152 62.5
Carub.0004s0475 Capsella rubella HOM05D000104 ORTHO05D003467 1.0e-43 180.6 153 63.4
Solyc08g029130.3 Solanum lycopersicum HOM05D000104 ORTHO05D003467 1.0e-43 180.6 155 64.5
Sopen08g010020 Solanum pennellii HOM05D000104 ORTHO05D003467 1.0e-43 180.6 155 64.5
BcaC07g40886 Brassica carinata HOM05D000104 ORTHO05D003467 2.3e-43 179.5 153 66.0
C08p38830 Brassica napus HOM05D000104 ORTHO05D003467 2.3e-43 179.5 153 66.0
Lj1g0020904 Lotus japonicus HOM05D000104 ORTHO05D003467 2.3e-43 179.5 156 63.5
CARHR116490 Cardamine hirsuta HOM05D000104 ORTHO05D003467 3.0e-43 179.1 153 63.4
AL4G16380 Arabidopsis lyrata HOM05D000104 ORTHO05D003467 8.7e-43 177.6 153 62.7
BcaB08g35151 Brassica carinata HOM05D000104 ORTHO05D003467 2.5e-42 176.0 153 65.4
A09p55830 Brassica napus HOM05D000104 ORTHO05D003467 4.3e-42 175.3 153 64.7
Thhalv10000014m.g Eutrema salsugineum HOM05D000104 ORTHO05D003467 4.3e-42 175.3 153 64.7
DCAR_007677 Daucus carota HOM05D000104 ORTHO05D003467 5.6e-42 174.9 153 62.1
Sp4g04150 Schrenkiella parvula HOM05D000104 ORTHO05D003467 5.6e-42 174.9 153 64.1
BolC8t51453H Brassica oleracea HOM05D000104 ORTHO05D003467 7.4e-42 174.5 155 65.2
PSO384G0886 Papaver somniferum HOM05D000104 ORTHO05D003467 9.6e-42 174.1 154 62.3
VMungo1309G2115 Vigna mungo HOM05D000104 ORTHO05D003467 9.6e-42 174.1 156 62.8
PSO339G0671 Papaver somniferum HOM05D000104 ORTHO05D003467 1.6e-41 173.3 154 62.3
Psat5g031880 Pisum sativum HOM05D000104 ORTHO05D003467 6.2e-41 171.4 155 61.3
BraA09t40986Z Brassica rapa HOM05D000104 ORTHO05D003467 1.8e-40 169.9 155 63.9
Lalb_Chr24g0402041 Lupinus albus HOM05D000104 ORTHO05D003467 7.6e-39 164.5 155 58.1
ATR1153G016 Amborella trichopoda HOM05D000104 ORTHO05D003467 5.5e-37 158.3 157 59.9
Lalb_Chr22g0361401 Lupinus albus HOM05D000104 ORTHO05D003467 9.3e-37 157.5 155 53.5
Psat6g027200 Pisum sativum HOM05D000104 ORTHO05D003467 4.8e-33 145.2 156 54.5
CDE06G2391 Ceratophyllum demersum HOM05D000104 ORTHO05D003467 1.5e-31 140.2 157 53.5
SEGI_33990 Sequoiadendron giganteum HOM05D000104 ORTHO05D003467 3.8e-30 135.6 163 51.5
Nitab4.5_0003811g0020 Nicotiana tabacum HOM05D000104 ORTHO05D003467 3.0e-27 125.9 88 71.6
HPP92_004609 Vanilla planifolia HOM05D000104 ORTHO05D003467 3.1e-24 115.9 137 51.1
AT4G31900 Arabidopsis thaliana HOM05D000104 ORTHO05D003467 2.6e-23 112.8 164 45.7
Phvul.001G046100 Phaseolus vulgaris HOM05D000104 ORTHO05D003467 1.0e-22 110.9 160 43.8
Glyma.17G217300 Glycine max HOM05D000104 ORTHO05D003467 2.2e-22 109.8 153 45.1
VMungo0647G2573 Vigna mungo HOM05D000104 ORTHO05D003467 2.1e-20 103.2 153 43.8
AL7G20000 Arabidopsis lyrata HOM05D000104 ORTHO05D003467 4.7e-20 102.1 168 43.5
Medtr1g013190 Medicago truncatula HOM05D000104 ORTHO05D003467 1.8e-19 100.1 154 40.9
Thhalv10027006m.g Eutrema salsugineum HOM05D000104 ORTHO05D003467 8.8e-19 97.8 190 36.8
SMO200G0085 Selaginella moellendorffii HOM05D000104 ORTHO05D003467 8.8e-19 97.8 160 44.4
Sp7g29720 Schrenkiella parvula HOM05D000104 ORTHO05D003467 8.2e-17 91.3 156 42.3
SMO228G0183 Selaginella moellendorffii HOM05D000104 ORTHO05D003467 2.4e-16 89.7 154 39.0
Ca_13055_v3 Cicer arietinum L. HOM05D000104 ORTHO05D003467 3.1e-16 89.4 114 45.6
AL7G19990 Arabidopsis lyrata HOM05D000104 ORTHO05D003467 4.1e-16 89.0 179 40.8
Carub.0007s0864 Capsella rubella HOM05D000104 ORTHO05D003467 5.3e-16 88.6 165 38.8
THA.LOC104804837 Tarenaya hassleriana HOM05D000104 ORTHO05D003467 1.2e-15 87.4 88 55.7
BcaC09g51983 Brassica carinata HOM05D000104 ORTHO05D003467 2.0e-15 86.7 179 37.4
Pp3c21_10800 Physcomitrium patens HOM05D000104 ORTHO05D003467 1.3e-14 84.0 167 36.5
BraA01t00598Z Brassica rapa HOM05D000104 ORTHO05D003467 3.8e-14 82.4 199 34.7
Pp3c18_19040 Physcomitrium patens HOM05D000104 ORTHO05D003467 3.8e-14 82.4 167 35.3
Pp3c18_19045 Physcomitrium patens HOM05D000104 ORTHO05D003467 3.8e-14 82.4 167 35.3
A01p06320 Brassica napus HOM05D000104 ORTHO05D003467 5.0e-14 82.0 189 35.4
C01p06980 Brassica napus HOM05D000104 ORTHO05D003467 5.0e-14 82.0 201 34.3
TPR.G38889 Trifolium pratense HOM05D000104 ORTHO05D003467 6.5e-14 81.6 155 38.7
Mapoly0010s0012 Marchantia polymorpha HOM05D000104 ORTHO05D003467 5.5e-13 78.6 158 36.1
RcHm_v2.0_Chr3g0495041 Rosa chinensis HOM05D000104 ORTHO05D003467 7.2e-13 78.2 68 60.3
BolC1t00694H Brassica oleracea HOM05D000104 ORTHO05D003467 9.4e-13 77.8 209 32.5
A01p06340 Brassica napus HOM05D000104 ORTHO05D003467 6.7e-11 71.6 177 33.9
BraA01t00599Z Brassica rapa HOM05D000104 ORTHO05D003467 6.7e-11 71.6 177 33.9
C01p07000 Brassica napus HOM05D000104 ORTHO05D003467 4.4e-10 68.9 177 33.3
vmacro05139 Vaccinium macrocarpon HOM05D000104 ORTHO05D003467 7.4e-10 68.2 57 57.9
FAN26G0509 Fragaria x ananassa HOM05D006007 ORTHO05D003467 1.3e-09 67.4 70 51.4
BcaC09g51981 Brassica carinata HOM05D000104 ORTHO05D003467 3.7e-09 65.9 184 32.1
BolC1t00695H Brassica oleracea HOM05D000104 ORTHO05D003467 3.7e-09 65.9 184 32.1
Os06g0183800 Oryza sativa ssp. japonica HOM05D000104 ORTHO05D003467 7.0e-08 61.6 65 49.2
A03p61110 Brassica napus HOM05D000104 ORTHO05D003467 3.5e-07 59.3 109 34.9
HPP92_004615 Vanilla planifolia HOM05D000104 ORTHO05D003467 1.3e-06 57.4 149 32.9


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