Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031497 Camellia sinensis var. sinensis HOM05D006044 ORTHO05D007653 6.9e-69 263.8 133 100.0
CSS0014603 Camellia sinensis var. sinensis HOM05D006044 ORTHO05D007653 7.2e-50 200.7 139 75.5
Lsat_1_v5_gn_2_111680 Lactuca sativa HOM05D006044 ORTHO05D007653 7.2e-50 200.7 137 75.2
arahy.Tifrunner.gnm1.ann1.6RB8S0 Arachis hypogaea HOM05D006044 ORTHO05D007653 1.2e-49 199.9 139 74.8
arahy.Tifrunner.gnm1.ann1.L4QR06 Arachis hypogaea HOM05D006044 ORTHO05D007653 1.2e-49 199.9 139 74.8
Cpa.g.sc157.53 Carica papaya HOM05D006044 ORTHO05D007653 2.1e-49 199.1 139 74.1
HanXRQChr14g0453721 Helianthus annuus HOM05D006044 ORTHO05D007653 2.7e-49 198.7 137 74.5
Manes.01G177500 Manihot esculenta HOM05D006044 ORTHO05D007653 3.6e-49 198.4 139 74.1
Atru.chr3.2998 Acer truncatum HOM05D006044 ORTHO05D007653 4.7e-49 198.0 139 74.1
Glyma.14G035900 Glycine max HOM05D006044 ORTHO05D007653 4.7e-49 198.0 139 74.8
Lsat_1_v5_gn_2_28381 Lactuca sativa HOM05D006044 ORTHO05D007653 4.7e-49 198.0 137 73.7
Medtr5g089300 Medicago truncatula HOM05D006044 ORTHO05D007653 4.7e-49 198.0 139 74.1
Sc12g0010240 Simmondsia chinensis HOM05D006044 ORTHO05D007653 4.7e-49 198.0 139 74.8
Glyma.02G278800 Glycine max HOM05D006044 ORTHO05D007653 6.1e-49 197.6 139 74.1
Lalb_Chr10g0106211 Lupinus albus HOM05D006044 ORTHO05D007653 6.1e-49 197.6 139 74.1
Lalb_Chr17g0347851 Lupinus albus HOM05D006044 ORTHO05D007653 6.1e-49 197.6 139 74.1
Phvul.008G202000 Phaseolus vulgaris HOM05D006044 ORTHO05D007653 6.1e-49 197.6 139 74.1
VMungo0647G0704 Vigna mungo HOM05D006044 ORTHO05D007653 6.1e-49 197.6 139 74.1
Nn7g36759 Nelumbo nucifera HOM05D006044 ORTHO05D007653 7.9e-49 197.2 139 74.1
TAR633G2719 Trochodendron aralioides HOM05D006044 ORTHO05D007653 1.0e-48 196.8 139 74.1
Cc03_g11600 Coffea canephora HOM05D006044 ORTHO05D007653 1.4e-48 196.4 141 74.5
Nitab4.5_0000069g0030 Nicotiana tabacum HOM05D006044 ORTHO05D007653 1.4e-48 196.4 139 74.1
Nitab4.5_0011609g0020 Nicotiana tabacum HOM05D006044 ORTHO05D007653 1.4e-48 196.4 139 74.1
Oeu032567.1 Olea europaea HOM05D006044 ORTHO05D007653 1.4e-48 196.4 142 74.6
Psat2g020640 Pisum sativum HOM05D006044 ORTHO05D007653 1.4e-48 196.4 139 73.4
QL01p016848 Quercus lobata HOM05D006044 ORTHO05D007653 1.4e-48 196.4 138 73.2
TPR.G16400 Trifolium pratense HOM05D006044 ORTHO05D007653 1.4e-48 196.4 137 73.7
FvH4_4g01940 Fragaria vesca HOM05D006044 ORTHO05D007653 3.0e-48 195.3 139 72.7
FAN12G1761 Fragaria x ananassa HOM05D006044 ORTHO05D007653 3.0e-48 195.3 139 72.7
FAN22G1152 Fragaria x ananassa HOM05D006044 ORTHO05D007653 3.0e-48 195.3 139 72.7
LjContig00564g0010691 Lotus japonicus HOM05D006044 ORTHO05D007653 3.0e-48 195.3 137 73.7
THA.LOC104811201 Tarenaya hassleriana HOM05D006044 ORTHO05D007653 3.0e-48 195.3 139 72.7
ATR0763G184 Amborella trichopoda HOM05D006044 ORTHO05D007653 3.9e-48 194.9 139 72.7
HanXRQChr07g0196181 Helianthus annuus HOM05D006044 ORTHO05D007653 3.9e-48 194.9 137 73.0
CANSAT11G0073 Cannabis sativa HOM05D006044 ORTHO05D007653 5.1e-48 194.5 137 73.0
Ca_11896_v3 Cicer arietinum L. HOM05D006044 ORTHO05D007653 5.1e-48 194.5 139 71.9
Potri.001G273200 Populus trichocarpa HOM05D006044 ORTHO05D007653 5.1e-48 194.5 137 73.7
THA.LOC104799136 Tarenaya hassleriana HOM05D006044 ORTHO05D007653 5.1e-48 194.5 139 72.7
Peaxi162Scf00021g02522 Petunia axillaris HOM05D006044 ORTHO05D007653 6.7e-48 194.1 139 72.7
PGR102G0082 Punica granatum HOM05D006044 ORTHO05D007653 6.7e-48 194.1 139 72.7
GSVIVG01037329001 Vitis vinifera HOM05D006044 ORTHO05D007653 6.7e-48 194.1 140 73.6
Solyc01g008360.3 Solanum lycopersicum HOM05D006044 ORTHO05D007653 8.8e-48 193.7 139 74.8
Sopen01g003880 Solanum pennellii HOM05D006044 ORTHO05D007653 8.8e-48 193.7 139 74.8
PGSC0003DMG400016393 Solanum tuberosum HOM05D006044 ORTHO05D007653 8.8e-48 193.7 139 74.8
CDE09G0744 Ceratophyllum demersum HOM05D006044 ORTHO05D007653 1.1e-47 193.4 138 73.9
Ca_06201_v3 Cicer arietinum L. HOM05D006044 ORTHO05D007653 1.1e-47 193.4 139 71.9
Thecc.09G247200 Theobroma cacao HOM05D006044 ORTHO05D007653 1.5e-47 193.0 139 71.9
Gohir.A13G218400 Gossypium hirsutum HOM05D006044 ORTHO05D007653 2.0e-47 192.6 139 71.9
Gohir.D13G222100 Gossypium hirsutum HOM05D006044 ORTHO05D007653 2.0e-47 192.6 139 71.9
Gorai.013G253200 Gossypium raimondii HOM05D006044 ORTHO05D007653 2.0e-47 192.6 139 71.9
Prupe.1G025000 Prunus persica HOM05D006044 ORTHO05D007653 2.0e-47 192.6 139 71.9
Prupe.1G400800 Prunus persica HOM05D006044 ORTHO05D007653 2.0e-47 192.6 139 72.7
RcHm_v2.0_Chr4g0388901 Rosa chinensis HOM05D006044 ORTHO05D007653 2.0e-47 192.6 139 71.2
PSO339G3702 Papaver somniferum HOM05D006044 ORTHO05D007653 2.6e-47 192.2 139 71.9
PSO384G3308 Papaver somniferum HOM05D006044 ORTHO05D007653 2.6e-47 192.2 139 71.9
Aa31LG3G15040 Aethionema arabicum HOM05D006044 ORTHO05D007653 4.4e-47 191.4 139 71.9
COL.COLO4_24488 Corchorus olitorius HOM05D006044 ORTHO05D007653 4.4e-47 191.4 139 71.2
ClCG02G022780 Citrullus lanatus HOM05D006044 ORTHO05D007653 5.7e-47 191.0 140 72.1
MELO3C014555.2 Cucumis melo HOM05D006044 ORTHO05D007653 5.7e-47 191.0 140 72.1
Cfa009890 Carpinus fangiana HOM05D006044 ORTHO05D007653 7.4e-47 190.7 139 73.4
Haze_23252 Corylus avellana HOM05D006044 ORTHO05D007653 7.4e-47 190.7 139 73.4
MD08G1047500 Malus domestica HOM05D006044 ORTHO05D007653 7.4e-47 190.7 139 71.9
unitig_27.g25012 Utricularia gibba HOM05D006044 ORTHO05D007653 7.4e-47 190.7 142 72.5
Eucgr.B03747 Eucalyptus grandis HOM05D006044 ORTHO05D007653 9.7e-47 190.3 139 70.5
Rhsim13G0207900 Rhododendron simsii HOM05D006044 ORTHO05D007653 9.7e-47 190.3 139 71.9
SEGI_07566 Sequoiadendron giganteum HOM05D006044 ORTHO05D007653 9.7e-47 190.3 139 71.2
TWI75G0655 Tripterygium wilfordii HOM05D006044 ORTHO05D007653 9.7e-47 190.3 139 71.9
Ciclev10017186m.g Citrus clementina HOM05D006044 ORTHO05D007653 1.3e-46 189.9 139 70.5
Hma1.2p1_0214F.1_g090800 Hydrangea macrophylla HOM05D006044 ORTHO05D007653 1.3e-46 189.9 140 72.9
CiPaw.14G111700 Carya illinoinensis HOM05D006044 ORTHO05D007653 2.2e-46 189.1 139 72.7
Sabra09G0050500 Salix brachista HOM05D006044 ORTHO05D007653 2.8e-46 188.7 137 70.1
Ah.05g173120 Amaranthus hybridus HOM05D006044 ORTHO05D007653 3.7e-46 188.3 137 71.5
Migut.N02377 Erythranthe guttata HOM05D006044 ORTHO05D007653 3.7e-46 188.3 143 70.6
Hma1.2p1_1357F.1_g277915 Hydrangea macrophylla HOM05D006044 ORTHO05D007653 3.7e-46 188.3 134 73.1
CDE08G0916 Ceratophyllum demersum HOM05D006044 ORTHO05D007653 4.8e-46 188.0 138 73.2
SalBow1G1993 Salvia bowleyana HOM05D006044 ORTHO05D000010 4.8e-46 188.0 130 75.4
ECA238G3020 Erigeron canadensis HOM05D006044 ORTHO05D007653 6.3e-46 187.6 136 70.6
SalBow8G2527 Salvia bowleyana HOM05D006044 ORTHO05D007653 6.3e-46 187.6 131 74.8
EL10Ac1g00766 Beta vulgaris HOM05D006044 ORTHO05D007653 8.2e-46 187.2 137 71.5
EL10Ac5g12840 Beta vulgaris HOM05D006044 ORTHO05D007653 8.2e-46 187.2 137 71.5
A03p05430 Brassica napus HOM05D006044 ORTHO05D007653 8.2e-46 187.2 139 70.5
C03p06320 Brassica napus HOM05D006044 ORTHO05D007653 8.2e-46 187.2 139 70.5
BolC3t13140H Brassica oleracea HOM05D006044 ORTHO05D007653 8.2e-46 187.2 139 70.5
BraA03t09881Z Brassica rapa HOM05D006044 ORTHO05D007653 8.2e-46 187.2 139 70.5
AL6G22970 Arabidopsis lyrata HOM05D006044 ORTHO05D007653 1.1e-45 186.8 139 71.2
AT5G12190 Arabidopsis thaliana HOM05D006044 ORTHO05D007653 1.1e-45 186.8 139 71.2
A10p25610 Brassica napus HOM05D006044 ORTHO05D007653 1.1e-45 186.8 139 70.5
BraA10t44628Z Brassica rapa HOM05D006044 ORTHO05D007653 1.1e-45 186.8 139 70.5
AagrBONN_evm.TU.Sc2ySwM_117.1592 Anthoceros agrestis HOM05D006044 ORTHO05D007653 1.4e-45 186.4 139 69.8
BolC9t59301H Brassica oleracea HOM05D004351 ORTHO05D005196 1.4e-45 186.4 139 69.8
SGA_v2.0_scaffold310G48206 Striga asiatica HOM05D006044 ORTHO05D007653 1.4e-45 186.4 142 70.4
SGA_v2.0_scaffold3G01443 Striga asiatica HOM05D006044 ORTHO05D007653 1.4e-45 186.4 142 70.4
MBI19_g20794_MAGBIO Magnolia biondii HOM05D006044 ORTHO05D007653 1.8e-45 186.0 139 71.9
Potri.009G067500 Populus trichocarpa HOM05D006044 ORTHO05D007653 1.8e-45 186.0 135 70.4
Sp6g31450 Schrenkiella parvula HOM05D006044 ORTHO05D007653 2.4e-45 185.7 139 69.8
Aqoxy2G00401 Aquilegia oxysepala HOM05D006044 ORTHO05D007653 3.1e-45 185.3 139 72.7
Thhalv10015024m.g Eutrema salsugineum HOM05D006044 ORTHO05D007653 3.1e-45 185.3 139 69.8
BcaB01g05427 Brassica carinata HOM05D006044 ORTHO05D007653 5.3e-45 184.5 139 69.1
Carub.0006s1069 Capsella rubella HOM05D006044 ORTHO05D007653 5.3e-45 184.5 139 70.5
unitig_699.g19149 Utricularia gibba HOM05D006044 ORTHO05D007653 7.0e-45 184.1 142 71.8
AUR62013740 Chenopodium quinoa HOM05D006044 ORTHO05D007653 9.1e-45 183.7 137 69.3
AUR62023411 Chenopodium quinoa HOM05D006044 ORTHO05D007653 9.1e-45 183.7 137 69.3
Dinv09443 Davidia involucrata HOM05D006044 ORTHO05D007653 2.0e-44 182.6 130 73.8
Mapoly0207s0011 Marchantia polymorpha HOM05D006044 ORTHO05D007653 2.0e-44 182.6 138 67.4
Dinv37467 Davidia involucrata HOM05D006044 ORTHO05D007653 5.9e-44 181.0 130 73.1
Nn017s41474 Nelumbo nucifera HOM05D006044 ORTHO05D007653 5.9e-44 181.0 130 73.1
Pp3c1_15740 Physcomitrium patens HOM05D006044 ORTHO05D007653 1.7e-43 179.5 133 67.7
HPP92_019149 Vanilla planifolia HOM05D006044 ORTHO05D007653 8.5e-43 177.2 133 67.7
CBR_g501 Chara braunii HOM05D006044 ORTHO05D007653 4.2e-42 174.9 132 67.4
Ca_07394_v3 Cicer arietinum L. HOM05D006044 ORTHO05D007653 4.2e-42 174.9 139 66.2
Zm00001eb062150 Zea mays HOM05D006044 ORTHO05D007653 5.5e-42 174.5 136 67.6
Zm00001eb212190 Zea mays HOM05D006044 ORTHO05D007653 7.2e-42 174.1 136 67.6
Os03g0811700 Oryza sativa ssp. japonica HOM05D006044 ORTHO05D007653 1.6e-41 172.9 136 66.2
BcaNung07015 Brassica carinata HOM05D006044 ORTHO05D007653 8.0e-41 170.6 129 69.0
CARHR200930 Cardamine hirsuta HOM05D006044 ORTHO05D007653 8.8e-40 167.2 139 63.3
Aqoxy2G00402 Aquilegia oxysepala HOM05D006044 ORTHO05D007653 7.4e-39 164.1 139 61.2
AL3G46680 Arabidopsis lyrata HOM05D006044 ORTHO05D007653 4.5e-36 154.8 130 62.3
MD13G1049300 Malus domestica HOM05D006044 ORTHO05D007653 6.5e-35 151.0 120 67.5
SMO143G0133 Selaginella moellendorffii HOM05D006044 ORTHO05D007653 8.5e-35 150.6 129 60.5
Cre03.g158950 Chlamydomonas reinhardtii HOM05D006044 ORTHO05D007653 1.2e-31 140.2 136 52.9
EL10Ac9g21533 Beta vulgaris HOM05D006044 ORTHO05D007653 1.3e-30 136.7 105 68.6
Duzib170G0372 Durio zibethinus HOM05D006044 ORTHO05D007653 2.7e-28 129.0 99 67.7
MCO15G700 Micromonas commoda HOM05D006044 ORTHO05D007653 1.7e-27 126.3 107 61.7
PRCOL_00006242 Prasinoderma coloniale HOM05D006044 ORTHO05D007653 2.0e-23 112.8 123 48.8
Haze_26695 Corylus avellana HOM05D006044 ORTHO05D007653 7.7e-20 100.9 123 41.5
SGA_v2.0_scaffold34G13906 Striga asiatica HOM05D006044 ORTHO05D007653 2.1e-17 92.8 104 50.0
AT2G14870 Arabidopsis thaliana HOM05D006044 ORTHO05D007653 6.3e-14 81.3 84 51.2
SGA_v2.0_scaffold5G02950 Striga asiatica HOM05D006044 ORTHO05D007653 1.0e-11 73.9 91 47.3
SalBow1G3729 Salvia bowleyana HOM05D006044 ORTHO05D357234 1.0e-08 63.9 42 73.8


User provided reference genes

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