Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015574 Camellia sinensis var. sinensis HOM05D005462 ORTHO05D006718 1.7e-61 241.1 126 100.0
Dinv08599 Davidia involucrata HOM05D005462 ORTHO05D006718 1.2e-38 165.2 129 74.4
Actinidia03844 Actinidia chinensis HOM05D005462 ORTHO05D006718 2.2e-37 161.0 107 76.6
Lj2C34T7 Lonicera japonica HOM05D005462 ORTHO05D006718 1.8e-34 151.4 105 71.4
Nn2g14251 Nelumbo nucifera HOM05D005462 ORTHO05D006718 4.3e-33 146.7 97 76.3
Thecc.10G115600 Theobroma cacao HOM05D005462 ORTHO05D006718 5.7e-33 146.4 96 75.0
QL04p046981 Quercus lobata HOM05D005462 ORTHO05D006718 1.6e-32 144.8 96 72.9
CiPaw.13G042600 Carya illinoinensis HOM05D005462 ORTHO05D006718 2.8e-32 144.1 96 72.9
Solyc11g006680.3 Solanum lycopersicum HOM05D005462 ORTHO05D006718 3.7e-32 143.7 105 66.7
Duzib128G2019 Durio zibethinus HOM05D005462 ORTHO05D006718 4.8e-32 143.3 94 74.5
Gohir.A13G009500 Gossypium hirsutum HOM05D005462 ORTHO05D006718 4.8e-32 143.3 88 78.4
Gohir.D13G010200 Gossypium hirsutum HOM05D005462 ORTHO05D006718 6.3e-32 142.9 77 84.4
Gorai.013G010900 Gossypium raimondii HOM05D005462 ORTHO05D006718 6.3e-32 142.9 77 84.4
Potri.008G017400 Populus trichocarpa HOM05D005462 ORTHO05D006718 6.3e-32 142.9 130 55.4
PGSC0003DMG402007600 Solanum tuberosum HOM05D005462 ORTHO05D006718 6.3e-32 142.9 105 65.7
MSTRG.27558 Avicennia marina HOM05D005462 ORTHO05D006718 8.2e-32 142.5 88 76.1
Cpa.g.sc1114.1 Carica papaya HOM05D005462 ORTHO05D006718 8.2e-32 142.5 107 67.3
Cc02_g09510 Coffea canephora HOM05D005462 ORTHO05D006718 8.2e-32 142.5 85 77.6
RcHm_v2.0_Chr1g0336351 Rosa chinensis HOM05D005462 ORTHO05D006718 8.2e-32 142.5 95 72.6
Haze_03474 Corylus avellana HOM05D005462 ORTHO05D006718 1.1e-31 142.1 107 68.2
DCAR_028403 Daucus carota HOM05D005462 ORTHO05D006718 1.1e-31 142.1 110 66.4
Nitab4.5_0001047g0040 Nicotiana tabacum HOM05D000001 ORTHO05D000003 1.4e-31 141.7 110 66.4
Cfa010538 Carpinus fangiana HOM05D005462 ORTHO05D006718 1.8e-31 141.4 96 74.0
FAN03G2522 Fragaria x ananassa HOM05D005462 ORTHO05D006718 2.4e-31 141.0 98 70.4
Sed0013359 Sechium edule HOM05D005462 ORTHO05D006718 3.1e-31 140.6 89 78.7
Atru.chr12.1058 Acer truncatum HOM05D005462 ORTHO05D006718 4.1e-31 140.2 108 63.9
CAN.G143.13 Capsicum annuum HOM05D005462 ORTHO05D006718 4.1e-31 140.2 108 65.7
FvH4_7g06690 Fragaria vesca HOM05D005462 ORTHO05D006718 4.1e-31 140.2 98 69.4
PGR142G1862 Punica granatum HOM05D005462 ORTHO05D006718 4.1e-31 140.2 95 73.7
MD07G1061700 Malus domestica HOM05D005462 ORTHO05D006718 5.3e-31 139.8 96 68.8
TAR636G3557 Trochodendron aralioides HOM05D005462 ORTHO05D006718 5.3e-31 139.8 97 70.1
GSVIVG01034651001 Vitis vinifera HOM05D005462 ORTHO05D006718 5.3e-31 139.8 76 81.6
Nitab4.5_0003787g0050 Nicotiana tabacum HOM05D005462 ORTHO05D006718 6.9e-31 139.4 97 71.1
FAN06G4410 Fragaria x ananassa HOM05D005462 ORTHO05D006718 9.0e-31 139.0 98 69.4
ECA232G2701 Erigeron canadensis HOM05D005462 ORTHO05D006718 1.2e-30 138.7 89 75.3
FAN10G0457 Fragaria x ananassa HOM05D005462 ORTHO05D006718 1.2e-30 138.7 98 68.4
HanXRQChr11g0321471 Helianthus annuus HOM05D005462 ORTHO05D006718 3.4e-30 137.1 98 66.3
MBI01_g28355_MAGBIO Magnolia biondii HOM05D005462 ORTHO05D006718 3.4e-30 137.1 86 73.3
Peaxi162Scf00125g00414 Petunia axillaris HOM05D005462 ORTHO05D006718 3.4e-30 137.1 108 65.7
Eucgr.G02683 Eucalyptus grandis HOM05D005462 ORTHO05D006718 4.5e-30 136.7 96 67.7
Oeu033987.1 Olea europaea HOM05D005462 ORTHO05D006718 4.5e-30 136.7 89 74.2
Potri.010G241300 Populus trichocarpa HOM05D005462 ORTHO05D006718 4.5e-30 136.7 122 61.5
HanXRQChr11g0321421 Helianthus annuus HOM05D005462 ORTHO05D006718 5.9e-30 136.3 105 64.8
TWI15G0792 Tripterygium wilfordii HOM05D005462 ORTHO05D006718 7.6e-30 136.0 77 79.2
CANSAT56G2776 Cannabis sativa HOM05D005462 ORTHO05D006718 1.0e-29 135.6 73 84.9
Lsat_1_v5_gn_9_53421 Lactuca sativa HOM05D005462 ORTHO05D006718 1.0e-29 135.6 81 75.3
Sabra10G0188800 Salix brachista HOM05D005462 ORTHO05D006718 1.0e-29 135.6 124 55.6
Sopen11g002610 Solanum pennellii HOM05D005462 ORTHO05D006718 1.0e-29 135.6 105 64.8
Prupe.2G071400 Prunus persica HOM05D005462 ORTHO05D006718 1.7e-29 134.8 95 69.5
AUR62018420 Chenopodium quinoa HOM05D005462 ORTHO05D006718 2.2e-29 134.4 85 72.9
Medtr1g048080 Medicago truncatula HOM05D005462 ORTHO05D006718 2.2e-29 134.4 75 77.3
Lalb_Chr01g0010721 Lupinus albus HOM05D005462 ORTHO05D006718 2.9e-29 134.0 76 78.9
SalBow3G0159 Salvia bowleyana HOM05D005462 ORTHO05D006718 3.8e-29 133.7 86 70.9
THA.LOC104823152 Tarenaya hassleriana HOM05D005462 ORTHO05D006718 3.8e-29 133.7 89 70.8
arahy.Tifrunner.gnm1.ann1.D9T4RB Arachis hypogaea HOM05D005462 ORTHO05D006718 5.0e-29 133.3 118 58.5
arahy.Tifrunner.gnm1.ann1.LTKS6Y Arachis hypogaea HOM05D005462 ORTHO05D006718 5.0e-29 133.3 118 58.5
A10p31410 Brassica napus HOM05D005462 ORTHO05D006718 5.0e-29 133.3 101 65.3
BraA10t45187Z Brassica rapa HOM05D005462 ORTHO05D006718 5.0e-29 133.3 101 65.3
ClCG05G021870 Citrullus lanatus HOM05D005462 ORTHO05D006718 5.0e-29 133.3 96 72.9
BcaC06g32185 Brassica carinata HOM05D005462 ORTHO05D006718 6.5e-29 132.9 101 64.4
C09p72080 Brassica napus HOM05D005462 ORTHO05D006718 6.5e-29 132.9 105 63.8
BolC9t59953H Brassica oleracea HOM05D005462 ORTHO05D006718 6.5e-29 132.9 105 63.8
Sp6g38020 Schrenkiella parvula HOM05D005462 ORTHO05D006718 6.5e-29 132.9 80 76.2
CDE06G1106 Ceratophyllum demersum HOM05D005462 ORTHO05D006718 8.4e-29 132.5 92 69.6
Aqoxy4G02697 Aquilegia oxysepala HOM05D005462 ORTHO05D006718 1.1e-28 132.1 74 79.7
Ca_13242_v3 Cicer arietinum L. HOM05D005462 ORTHO05D006718 1.4e-28 131.7 75 78.7
Ca_30156_v3 Cicer arietinum L. HOM05D005462 ORTHO05D006718 1.4e-28 131.7 75 78.7
MELO3C012341.2 Cucumis melo HOM05D005462 ORTHO05D006718 1.4e-28 131.7 89 74.2
Migut.F00860 Erythranthe guttata HOM05D005462 ORTHO05D006718 1.4e-28 131.7 87 72.4
Thhalv10012596m.g Eutrema salsugineum HOM05D005462 ORTHO05D006718 1.4e-28 131.7 80 73.8
AUR62021021 Chenopodium quinoa HOM05D005462 ORTHO05D006718 1.9e-28 131.3 85 71.8
Sc09g0005160 Simmondsia chinensis HOM05D005462 ORTHO05D006718 2.5e-28 131.0 85 74.1
PGSC0003DMG400016997 Solanum tuberosum HOM05D005462 ORTHO05D006718 2.5e-28 131.0 98 70.4
CsaV3_5G035270 Cucumis sativus L. HOM05D005462 ORTHO05D006718 3.2e-28 130.6 88 76.1
Glyma.10G122100 Glycine max HOM05D005462 ORTHO05D006718 3.2e-28 130.6 106 61.3
Hund06792 Selenicereus undatus HOM05D005462 ORTHO05D006718 3.2e-28 130.6 93 68.8
EL10Ac3g07311 Beta vulgaris HOM05D005462 ORTHO05D006718 5.5e-28 129.8 85 71.8
Lj6g0019256 Lotus japonicus HOM05D005462 ORTHO05D006718 5.5e-28 129.8 74 75.7
Peaxi162Scf00195g01111 Petunia axillaris HOM05D005462 ORTHO05D006718 5.5e-28 129.8 105 60.0
Psat0s3982g0040 Pisum sativum HOM05D005462 ORTHO05D006718 5.5e-28 129.8 76 73.7
Sabra08G0010900 Salix brachista HOM05D005462 ORTHO05D006718 7.2e-28 129.4 105 63.8
TPR.G19815 Trifolium pratense HOM05D005462 ORTHO05D006718 9.3e-28 129.0 75 76.0
SGA_v2.0_scaffold329G48874 Striga asiatica HOM05D005462 ORTHO05D006718 1.2e-27 128.6 99 64.6
Aa31LG11G5620 Aethionema arabicum HOM05D005462 ORTHO05D000003 1.6e-27 128.3 76 75.0
Glyma.20G074200 Glycine max HOM05D005462 ORTHO05D006718 1.6e-27 128.3 74 75.7
Sopen04g004840 Solanum pennellii HOM05D005462 ORTHO05D006718 1.6e-27 128.3 98 67.3
AT5G04810 Arabidopsis thaliana HOM05D005462 ORTHO05D006718 2.1e-27 127.9 75 73.3
Solyc04g009730.4 Solanum lycopersicum HOM05D005462 ORTHO05D006718 2.7e-27 127.5 87 71.3
Ah.04g150500 Amaranthus hybridus HOM05D005462 ORTHO05D006718 6.1e-27 126.3 74 78.4
AL6G14460 Arabidopsis lyrata HOM05D005462 ORTHO05D006718 6.1e-27 126.3 75 72.0
PSO339G2458 Papaver somniferum HOM05D005462 ORTHO05D006718 1.8e-26 124.8 83 71.1
PSO384G2581 Papaver somniferum HOM05D005462 ORTHO05D006718 1.8e-26 124.8 83 71.1
Carub.0006s0369 Capsella rubella HOM05D005462 ORTHO05D006718 2.3e-26 124.4 80 68.8
CARHR208470 Cardamine hirsuta HOM05D005462 ORTHO05D006718 5.1e-26 123.2 74 73.0
Phvul.007G234900 Phaseolus vulgaris HOM05D005462 ORTHO05D006718 5.1e-26 123.2 74 73.0
VMungo0720G0270 Vigna mungo HOM05D005462 ORTHO05D006718 5.1e-26 123.2 74 74.3
CAN.G186.57 Capsicum annuum HOM05D005462 ORTHO05D006718 1.1e-25 122.1 97 64.9
Manes.07G085300 Manihot esculenta HOM05D005462 ORTHO05D006718 2.5e-25 120.9 88 68.2
HPP92_027469 Vanilla planifolia HOM05D005462 ORTHO05D006718 1.3e-24 118.6 72 75.0
ATR0772G220 Amborella trichopoda HOM05D005462 ORTHO05D006718 6.3e-24 116.3 72 70.8
Zm00001eb434090 Zea mays HOM05D005462 ORTHO05D006718 5.9e-22 109.8 86 61.6
vmacro05136 Vaccinium macrocarpon HOM05D005462 ORTHO05D006718 3.8e-21 107.1 70 77.1
vmacro07266 Vaccinium macrocarpon HOM05D005462 ORTHO05D006718 6.5e-21 106.3 57 87.7
SEGI_04507 Sequoiadendron giganteum HOM05D005462 ORTHO05D006718 9.4e-20 102.4 80 56.2
Oeu033283.1 Olea europaea HOM05D005462 ORTHO05D006718 9.7e-17 92.4 58 72.4
Pp3c16_280 Physcomitrium patens HOM05D005462 ORTHO05D006718 9.1e-15 85.9 74 48.6
AagrBONN_evm.TU.Sc2ySwM_362.2024 Anthoceros agrestis HOM05D005462 ORTHO05D006718 1.0e-13 82.4 93 41.9
Pp3c5_10110 Physcomitrium patens HOM05D005462 ORTHO05D006718 8.5e-13 79.3 74 41.9
HPP92_013817 Vanilla planifolia HOM05D005462 ORTHO05D006718 9.4e-12 75.9 43 76.7
C09p30460 Brassica napus HOM05D003366 ORTHO05D004045 2.7e-11 74.3 46 69.6
BolC9t55910H Brassica oleracea HOM05D003366 ORTHO05D004045 6.1e-11 73.2 73 49.3
CDE06G0092 Ceratophyllum demersum HOM05D005462 ORTHO05D006718 7.9e-11 72.8 52 67.3
Mapoly0061s0009 Marchantia polymorpha HOM05D005462 ORTHO05D006718 1.8e-07 61.6 65 46.2
CDE06G2100 Ceratophyllum demersum HOM05D005462 ORTHO05D006718 9.1e-07 59.3 40 67.5


User provided reference genes

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