Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G5620 LG-11 + View
Acer truncatum Atru.chr12.1058 chr12 + View
Actinidia chinensis Actinidia03844 Lachesis_group17 + View
Arabidopsis lyrata AL6G14460 scaffold_6 + View
Avicennia marina MSTRG.27558 ScioBoG_8578_HRSCAF_8617 - View
Arabidopsis thaliana AT5G04810 pentatricopeptide (PPR) repeat-containing protein pentatricopeptide (PPR) repeat-containing protein%3B FUNCTIONS IN: nucleotide binding%2C nucleic acid binding%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Pentatricopeptide repeat (InterPro:IPR002885)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT1G05670.2)%3B Has 66261 Blast hits to 20285 proteins in 585 species: Archae - 7%3B Bacteria - 408%3B Metazoa - 3695%3B Fungi - 2485%3B Plants - 56206%3B Viruses - 140%3B Other Eukaryotes - 3320 (source: NCBI BLink). Chr5 + View
Capsicum annuum CAN.G186.57 PGAv.1.6.scaffold186 + View
Capsicum annuum CAN.G143.13 PGAv.1.6.scaffold143 + View
Cannabis sativa CANSAT56G2776 NC_044371.1 + View
Corylus avellana Haze_03474 Similar to PPR4: Pentatricopeptide repeat-containing protein At5g04810, chloroplastic (Arabidopsis thaliana OX%3D3702) 1 - View
Coffea canephora Cc02_g09510 Pentatricopeptide repeat-containing protein At5g04810, chloroplastic chr2 - View
Citrus clementina Ciclev10014488m.g scaffold_2 + View
Carpinus fangiana Cfa010538 Cfa04 - View
Cardamine hirsuta CARHR208470 Pentatricopeptide repeat-containing protein Chr6 - View
Carya illinoinensis CiPaw.13G042200 Chr13 + View
Citrullus lanatus ClCG05G021870 Pentatricopeptide repeat-containing protein, putative CG_Chr05 + View
Cucumis melo MELO3C012341.2 Pentatricopeptide repeat-containing protein, putative chr10 + View
Carica papaya Cpa.g.sc54.12 supercontig_54 + View
Cucumis sativus L. CsaV3_5G035270 Pentatricopeptide repeat-containing protein, chloroplastic chr5 - View
Davidia involucrata Dinv08599 GWHABJS00000004 - View
Durio zibethinus Duzib128G2019 NW_019168481.1 + View
Erigeron canadensis ECA232G2701 Conyza_canadensis_scaffold:2 + View
Eucalyptus grandis Eucgr.G02683 Chr07 - View
Erythranthe guttata Migut.F00860 scaffold_6 - View
Eutrema salsugineum Thhalv10012596m.g PF00076//PF01535//PF12854//PF13041//PF13812 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) scaffold_2 + View
Glycine max Glyma.20G074200 PF00076//PF01535//PF12854//PF13041//PF13812 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Gm20 - View
Lonicera japonica Lj2C34T7 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_9_47180 PTHR24012:SF484 - PLEXUS, ISOFORM A-RELATED Lsat_1_v8_lg_9 - View
Malus domestica MD07G1061700 pentatricopeptide (PPR) repeat-containing protein Chr07 + View
Olea europaea Oeu033283.1 scaffold279 + View
Petunia axillaris Peaxi162Scf00195g01111 pentatricopeptide (PPR) repeat-containing protein Peaxi162Scf00195 + View
Petunia axillaris Peaxi162Scf00125g00414 pentatricopeptide (PPR) repeat-containing protein Peaxi162Scf00125 - View
Prunus persica Prupe.2G071400 Pp02 + View
Populus trichocarpa Potri.010G241300 KOG0107//KOG0121 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Nuclear cap-binding protein complex, subunit CBP20 (RRM superfamily) Chr10 + View
Populus trichocarpa Potri.008G017400 KOG0107//KOG0121 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Nuclear cap-binding protein complex, subunit CBP20 (RRM superfamily) Chr08 + View
Quercus lobata QL04p046981 4 + View
Salvia bowleyana SalBow3G0159 GWHASIU00000006 - View
Salix brachista Sabra10G0188800 GWHAAZH00000010 + View
Salix brachista Sabra08G0010900 GWHAAZH00000008 + View
Simmondsia chinensis Sc09g0005160 GWHAASQ00000009 - View
Sechium edule Sed0013359 LG07 - View
Solanum lycopersicum Solyc11g006680.3 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2I0WCG1_9ASPA) SL4.0ch11 - View
Solanum lycopersicum Solyc04g009720.1 Pentatricopeptide repeat-containing protein (AHRD V3.3 *-* A0A2I0WCG1_9ASPA) SL4.0ch04 + View
Schrenkiella parvula Sp6g38020 KOG0114//KOG0126 - Predicted RNA-binding protein (RRM superfamily) // Predicted RNA-binding protein (RRM superfamily) ch6-6 - View
Solanum pennellii Sopen11g002610 pentatricopeptide (PPR) repeat-containing protein | FUNCTIONS IN: nucleotide binding, nucleic acid binding | LOCATED IN: chloroplast | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Pentatricopeptide repeat , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein Spenn-ch11 - View
Solanum pennellii Sopen04g004840 pentatricopeptide (PPR) repeat-containing protein | FUNCTIONS IN: nucleotide binding, nucleic acid binding | LOCATED IN: chloroplast | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Pentatricopeptide repeat , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein Spenn-ch04 + View
Solanum tuberosum PGSC0003DMG400016997 Pentatricopeptide repeat-containing protein ST4.03ch04 - View
Solanum tuberosum PGSC0003DMG401007600 Pentatricopeptide repeat-containing protein ST4.03ch11 + View
Selenicereus undatus Hund06792 Scaffold_33676 + View
Trochodendron aralioides TAR636G3557 group1 + View
Theobroma cacao Thecc.10G115600 Pentatricopeptide repeat-containing protein Chromosome_10 - View
Tripterygium wilfordii TWI15G0792 NC_052247.1 - View
Vaccinium macrocarpon vmacro07266 Similar to PPR4: Pentatricopeptide repeat-containing protein At5g04810, chloroplastic (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01034651001 chr13 + View