Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0700 Ceratophyllum demersum HOM05D005498 ORTHO05D006719 6.8e-143 510.8 279 100.0
CDE02G3318 Ceratophyllum demersum HOM05D005498 ORTHO05D006719 6.6e-122 441.0 245 98.4
CSS0015612 Camellia sinensis var. sinensis HOM05D005498 ORTHO05D006719 9.9e-102 374.0 268 78.0
PGSC0003DMG400014166 Solanum tuberosum HOM05D005498 ORTHO05D006719 1.3e-101 373.6 267 73.4
Solyc03g117940.3 Solanum lycopersicum HOM05D005498 ORTHO05D006719 2.9e-101 372.5 269 72.9
Nitab4.5_0000976g0330 Nicotiana tabacum HOM05D005498 ORTHO05D006719 6.4e-101 371.3 283 69.3
Sopen03g036840 Solanum pennellii HOM05D005498 ORTHO05D006719 5.5e-100 368.2 267 72.7
TAR622G0889 Trochodendron aralioides HOM05D005498 ORTHO05D006719 5.5e-100 368.2 268 77.2
CAN.G1008.34 Capsicum annuum HOM05D005498 ORTHO05D006719 9.3e-100 367.5 267 73.0
Nitab4.5_0007669g0040 Nicotiana tabacum HOM05D005498 ORTHO05D006719 2.7e-99 365.9 274 73.7
Thecc.01G236700 Theobroma cacao HOM05D005498 ORTHO05D006719 3.5e-99 365.5 267 73.0
Actinidia36852 Actinidia chinensis HOM05D005498 ORTHO05D006719 6.0e-99 364.8 268 75.0
HPP92_001926 Vanilla planifolia HOM05D005498 ORTHO05D006356 7.9e-99 364.4 268 72.4
Cc04_g05550 Coffea canephora HOM05D005498 ORTHO05D006719 1.0e-98 364.0 268 72.4
Manes.08G098200 Manihot esculenta HOM05D005498 ORTHO05D006719 2.3e-98 362.8 265 73.6
Rhsim12G0182600 Rhododendron simsii HOM05D005498 ORTHO05D006719 2.3e-98 362.8 266 75.9
Prupe.1G210100 Prunus persica HOM05D005498 ORTHO05D006719 3.9e-98 362.1 267 72.7
Ciclev10028992m.g Citrus clementina HOM05D005498 ORTHO05D006719 1.5e-97 360.1 266 72.9
MBI07_g11055_MAGBIO Magnolia biondii HOM05D005498 ORTHO05D006719 1.5e-97 360.1 274 73.4
CiPaw.05G096800 Carya illinoinensis HOM05D005498 ORTHO05D006719 1.9e-97 359.8 265 71.7
MD16G1130900 Malus domestica HOM05D005498 ORTHO05D006719 4.3e-97 358.6 267 73.8
Potri.003G158800 Populus trichocarpa HOM05D005498 ORTHO05D006719 4.3e-97 358.6 273 75.1
EL10Ac2g02403 Beta vulgaris HOM05D005498 ORTHO05D006719 5.6e-97 358.2 265 72.8
Haze_12543 Corylus avellana HOM05D005498 ORTHO05D006719 5.6e-97 358.2 269 71.0
Nn3g16174 Nelumbo nucifera HOM05D005498 ORTHO05D006719 5.6e-97 358.2 268 76.1
Aqoxy3G01715 Aquilegia oxysepala HOM05D005498 ORTHO05D006719 7.4e-97 357.8 241 81.7
MD13G1135200 Malus domestica HOM05D005498 ORTHO05D006719 1.3e-96 357.1 267 73.4
Dinv13692 Davidia involucrata HOM05D005498 ORTHO05D006719 2.1e-96 356.3 257 75.5
Eucgr.J01697 Eucalyptus grandis HOM05D005498 ORTHO05D006719 1.1e-95 354.0 267 73.8
SGA_v2.0_scaffold37G14665 Striga asiatica HOM05D005498 ORTHO05D006719 1.1e-95 354.0 280 73.2
Sabra03G0115200 Salix brachista HOM05D005498 ORTHO05D006719 1.8e-95 353.2 268 74.6
TWI75G1441 Tripterygium wilfordii HOM05D005498 ORTHO05D006719 1.8e-95 353.2 241 76.3
Gohir.A10G154800 Gossypium hirsutum HOM05D005498 ORTHO05D006719 2.4e-95 352.8 267 70.4
Gohir.D10G111100 Gossypium hirsutum HOM05D005498 ORTHO05D006719 2.4e-95 352.8 267 70.4
TWI75G0967 Tripterygium wilfordii HOM05D005498 ORTHO05D006719 3.1e-95 352.4 241 75.5
Gorai.011G122500 Gossypium raimondii HOM05D005498 ORTHO05D006719 4.0e-95 352.1 267 70.4
PSO017G5587 Papaver somniferum HOM05D005498 ORTHO05D006719 5.3e-95 351.7 268 73.1
Duzib264G0012 Durio zibethinus HOM05D005498 ORTHO05D006719 6.9e-95 351.3 267 69.7
TWI36G1055 Tripterygium wilfordii HOM05D005498 ORTHO05D006719 9.0e-95 350.9 258 71.7
MSTRG.22826 Avicennia marina HOM05D005498 ORTHO05D006719 1.5e-94 350.1 278 70.1
Ca_04134_v3 Cicer arietinum L. HOM05D005498 ORTHO05D006719 1.5e-94 350.1 268 72.0
PGR119G1930 Punica granatum HOM05D005498 ORTHO05D006719 3.4e-94 349.0 266 69.2
PSO478G3668 Papaver somniferum HOM05D005498 ORTHO05D006719 4.5e-94 348.6 270 73.0
Lj9A489T67 Lonicera japonica HOM05D005498 ORTHO05D006719 7.6e-94 347.8 299 66.9
Lalb_Chr21g0307771 Lupinus albus HOM05D005498 ORTHO05D006719 7.6e-94 347.8 268 71.3
RcHm_v2.0_Chr4g0428191 Rosa chinensis HOM05D005498 ORTHO05D006719 2.2e-93 346.3 267 73.8
FvH4_4g21991 Fragaria vesca HOM05D005498 ORTHO05D006719 3.8e-93 345.5 267 73.4
FAN07G2790 Fragaria x ananassa HOM05D005498 ORTHO05D006719 3.8e-93 345.5 267 73.4
SGA_v2.0_scaffold5G02818 Striga asiatica HOM05D005498 ORTHO05D006719 3.8e-93 345.5 278 70.1
Migut.I00649 Erythranthe guttata HOM05D005498 ORTHO05D006719 4.9e-93 345.1 269 71.4
Lj3g0014785 Lotus japonicus HOM05D005498 ORTHO05D006719 4.9e-93 345.1 268 69.0
Hund15325 Selenicereus undatus HOM05D005498 ORTHO05D006719 4.9e-93 345.1 290 64.8
LjContig00470g0019612 Lotus japonicus HOM05D005498 ORTHO05D006719 8.4e-93 344.4 268 70.9
Os02g0234800 Oryza sativa ssp. japonica HOM05D005498 ORTHO05D006719 1.1e-92 344.0 265 71.3
GSVIVG01001138001 Vitis vinifera HOM05D005498 ORTHO05D006719 1.4e-92 343.6 268 71.6
Psat1g052840 Pisum sativum HOM05D005498 ORTHO05D006719 1.9e-92 343.2 265 72.5
arahy.Tifrunner.gnm1.ann1.JCC7XL Arachis hypogaea HOM05D005498 ORTHO05D006719 2.5e-92 342.8 279 67.4
FAN17G1337 Fragaria x ananassa HOM05D005498 ORTHO05D006719 2.5e-92 342.8 267 72.7
Sed0026884 Sechium edule HOM05D005498 ORTHO05D006719 2.5e-92 342.8 265 69.8
THA.LOC104820204 Tarenaya hassleriana HOM05D005498 ORTHO05D006719 3.2e-92 342.4 256 70.7
AUR62037729 Chenopodium quinoa HOM05D005498 ORTHO05D006719 5.5e-92 341.7 267 74.2
arahy.Tifrunner.gnm1.ann1.LXGX9H Arachis hypogaea HOM05D005498 ORTHO05D006719 9.3e-92 340.9 279 67.4
Glyma.20G075100 Glycine max HOM05D005498 ORTHO05D006719 9.3e-92 340.9 266 68.8
HanXRQChr05g0154501 Helianthus annuus HOM05D005498 ORTHO05D006719 1.6e-91 340.1 272 69.5
Sabra01G0050700 Salix brachista HOM05D005498 ORTHO05D006719 1.6e-91 340.1 303 68.0
ATR0582G093 Amborella trichopoda HOM05D005498 ORTHO05D006719 2.1e-91 339.7 270 70.4
Phvul.003G001500 Phaseolus vulgaris HOM05D005498 ORTHO05D006719 2.7e-91 339.3 266 69.2
Potri.001G072100 Populus trichocarpa HOM05D005498 ORTHO05D006719 2.7e-91 339.3 273 70.3
CsaV3_6G007610 Cucumis sativus L. HOM05D005498 ORTHO05D006719 3.5e-91 339.0 265 67.5
VMungo0251G3521 Vigna mungo HOM05D005498 ORTHO05D006719 4.6e-91 338.6 276 69.9
Lalb_Chr02g0144691 Lupinus albus HOM05D005498 ORTHO05D006719 7.9e-91 337.8 268 70.5
ECA246G1673 Erigeron canadensis HOM05D005498 ORTHO05D006719 3.0e-90 335.9 241 73.0
Lsat_1_v5_gn_5_9301 Lactuca sativa HOM05D005498 ORTHO05D006719 1.1e-89 334.0 265 69.8
Glyma.10G123200 Glycine max HOM05D005498 ORTHO05D006719 1.5e-89 333.6 271 67.9
TPR.G25230 Trifolium pratense HOM05D005498 ORTHO05D006719 1.9e-89 333.2 261 69.7
HanXRQChr06g0174511 Helianthus annuus HOM05D005498 ORTHO05D006719 2.1e-88 329.7 275 68.0
Medtr6g004180 Medicago truncatula HOM05D005498 ORTHO05D006719 6.3e-88 328.2 279 64.2
AL1G20310 Arabidopsis lyrata HOM05D005498 ORTHO05D006719 2.4e-87 326.2 256 68.0
Zm00001eb064600 Zea mays HOM05D005498 ORTHO05D006719 6.9e-87 324.7 280 65.7
THA.LOC104823693 Tarenaya hassleriana HOM05D005498 ORTHO05D006719 1.5e-86 323.6 256 68.4
Sc04g0000070 Simmondsia chinensis HOM05D005498 ORTHO05D006719 3.4e-86 322.4 248 72.2
CARHR009720 Cardamine hirsuta HOM05D005498 ORTHO05D006719 1.0e-85 320.9 256 66.0
A09p65320 Brassica napus HOM05D005498 ORTHO05D006719 1.3e-85 320.5 239 73.2
A06p06430 Brassica napus HOM05D005498 ORTHO05D006719 8.5e-85 317.8 239 73.2
BraA06t23854Z Brassica rapa HOM05D005498 ORTHO05D006719 8.5e-85 317.8 239 73.2
Thhalv10008494m.g Eutrema salsugineum HOM05D005498 ORTHO05D006719 8.5e-85 317.8 241 68.9
BraA09t41876Z Brassica rapa HOM05D005498 ORTHO05D006719 1.9e-84 316.6 239 72.4
Atru.chr12.1486 Acer truncatum HOM05D005498 ORTHO05D006719 2.5e-84 316.2 266 66.5
C05p07830 Brassica napus HOM05D005498 ORTHO05D006719 2.5e-84 316.2 239 72.8
C08p13170 Brassica napus HOM05D005498 ORTHO05D006719 2.5e-84 316.2 241 68.9
BolC5t29534H Brassica oleracea HOM05D005498 ORTHO05D006719 2.5e-84 316.2 239 72.8
BolC8t48946H Brassica oleracea HOM05D005498 ORTHO05D006719 2.5e-84 316.2 241 68.9
MELO3C022370.2 Cucumis melo HOM05D005498 ORTHO05D006719 2.5e-84 316.2 257 65.8
Sp1g08350 Schrenkiella parvula HOM05D005498 ORTHO05D006719 5.5e-84 315.1 241 69.7
BraA08t35348Z Brassica rapa HOM05D005498 ORTHO05D006719 9.3e-84 314.3 241 68.0
AT1G09760 Arabidopsis thaliana HOM05D005498 ORTHO05D006719 1.2e-83 313.9 256 66.8
Carub.0001s0910 Capsella rubella HOM05D005498 ORTHO05D006719 1.2e-83 313.9 241 68.9
C08p49270 Brassica napus HOM05D005498 ORTHO05D006719 2.1e-83 313.2 239 72.4
A08p34360 Brassica napus HOM05D005498 ORTHO05D006719 2.7e-83 312.8 241 68.0
BolC8t52462H Brassica oleracea HOM05D005498 ORTHO05D006719 4.6e-83 312.0 239 72.0
BcaC07g41860 Brassica carinata HOM05D005498 ORTHO05D006719 7.9e-83 311.2 239 72.0
COL.COLO4_24568 Corchorus olitorius HOM05D005498 ORTHO05D006719 7.9e-83 311.2 267 68.2
Sc04g0000010 Simmondsia chinensis HOM05D005498 ORTHO05D006719 1.4e-79 300.4 234 71.8
Aa31LG1G5230 Aethionema arabicum HOM05D005498 ORTHO05D006719 3.1e-79 299.3 241 67.6
SalBow7G1334 Salvia bowleyana HOM05D005498 ORTHO05D006719 4.1e-79 298.9 268 65.7
Mapoly0014s0064 Marchantia polymorpha HOM05D005498 ORTHO05D006719 3.4e-78 295.8 245 66.1
AUR62020276 Chenopodium quinoa HOM05D005498 ORTHO05D006719 2.1e-75 286.6 211 77.7
Hund15317 Selenicereus undatus HOM05D005498 ORTHO05D006719 2.1e-75 286.6 248 64.5
CSS0017542 Camellia sinensis var. sinensis HOM05D005498 ORTHO05D006719 8.8e-74 281.2 261 65.9
Pp3c8_21390 Physcomitrium patens HOM05D005498 ORTHO05D006719 1.7e-69 266.9 279 58.4
Pp3c20_1630 Physcomitrium patens HOM05D005498 ORTHO05D006719 2.9e-69 266.2 286 56.3
Pp3c23_20060 Physcomitrium patens HOM05D005498 ORTHO05D006719 2.9e-69 266.2 273 60.8
CSS0028024 Camellia sinensis var. sinensis HOM05D005498 ORTHO05D006719 1.1e-68 264.2 286 55.6
Cpa.g.sc2660.1 Carica papaya HOM05D005498 ORTHO05D006719 8.8e-66 254.6 153 88.2
Ah.10g024870 Amaranthus hybridus HOM05D005498 ORTHO05D006719 2.0e-65 253.4 153 88.2
unitig_8.g3047 Utricularia gibba HOM05D005498 ORTHO05D006719 3.2e-60 236.1 267 52.8
Peaxi162Scf00314g00830 Petunia axillaris HOM05D005498 ORTHO05D006719 4.7e-59 232.3 211 63.0
AagrBONN_evm.TU.Sc2ySwM_362.2343 Anthoceros agrestis HOM05D005498 ORTHO05D006719 1.5e-52 210.7 208 53.8
Cre16.g679600 Chlamydomonas reinhardtii HOM05D005498 ORTHO05D006719 1.5e-49 200.7 278 44.6
Gorai.007G212800 Gossypium raimondii HOM05D005498 ORTHO05D006719 7.5e-49 198.4 154 69.5
Actinidia08921 Actinidia chinensis HOM05D005498 ORTHO05D006719 2.7e-46 189.9 184 61.4
DCAR_021388 Daucus carota HOM05D005498 ORTHO05D006719 4.5e-46 189.1 125 77.6
SMO203G0044 Selaginella moellendorffii HOM05D005498 ORTHO05D006719 1.9e-44 183.7 153 66.7
Phvul.009G235000 Phaseolus vulgaris HOM05D005498 ORTHO05D006719 3.0e-42 176.4 167 61.1
Gorai.006G052400 Gossypium raimondii HOM05D005498 ORTHO05D006719 5.2e-42 175.6 153 64.1
Gohir.D11G198700 Gossypium hirsutum HOM05D005498 ORTHO05D006719 4.5e-38 162.5 154 62.3
Gohir.D13G083750 Gossypium hirsutum HOM05D005498 ORTHO05D006719 2.1e-35 153.7 154 58.4
Gohir.D13G071700 Gossypium hirsutum HOM05D005498 ORTHO05D006719 2.8e-35 153.3 154 58.4
PRCOL_00001779 Prasinoderma coloniale HOM05D005498 ORTHO05D006719 3.7e-32 142.9 240 37.5
Oeu027824.1 Olea europaea HOM05D005498 ORTHO05D006719 3.2e-31 139.8 268 38.1
Gorai.010G065400 Gossypium raimondii HOM05D005498 ORTHO05D006719 5.0e-29 132.5 105 64.8
FAN12G0959 Fragaria x ananassa HOM05D005498 ORTHO05D006719 5.6e-28 129.0 67 88.1
Cpa.g.sc38.27 Carica papaya HOM05D005498 ORTHO05D006719 1.2e-22 111.3 123 53.7
Ah.10g024860 Amaranthus hybridus HOM05D005498 ORTHO05D006719 4.7e-19 99.4 125 52.0
arahy.Tifrunner.gnm1.ann1.UV1K7Q Arachis hypogaea HOM05D005498 ORTHO05D006719 2.4e-15 87.0 73 56.2
RcHm_v2.0_Chr4g0427471 Rosa chinensis HOM05D000753 ORTHO05D006719 6.0e-14 82.4 115 47.0
MELO3C026686.2 Cucumis melo HOM05D005498 ORTHO05D006719 5.1e-13 79.3 105 51.4
SHI04092 Sapria himalayana HOM05D003771 ORTHO05D004396 3.6e-11 73.2 42 73.8
PSO591G0416 Papaver somniferum HOM05D005498 ORTHO05D006719 8.1e-11 72.0 73 56.2
CBR_g3778 Chara braunii HOM05D005498 ORTHO05D006719 4.1e-07 59.7 42 66.7
AagrBONN_evm.TU.Sc2ySwM_368.1004 Anthoceros agrestis HOM05D016773 ORTHO05D019668 1.6e-06 57.8 179 28.5


User provided reference genes

Program Settings