Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE11G0342 Ceratophyllum demersum HOM05D004823 ORTHO05D005814 1.9e-153 545.8 271 100.0
Nn1g00608 Nelumbo nucifera HOM05D004823 ORTHO05D005814 4.8e-69 265.4 275 52.4
TAR375G0889 Trochodendron aralioides HOM05D004823 ORTHO05D005814 2.4e-68 263.1 271 52.0
Hma1.2p1_0601F.1_g187170 Hydrangea macrophylla HOM05D004823 ORTHO05D005814 4.5e-67 258.8 275 50.2
Actinidia33293 Actinidia chinensis HOM05D004823 ORTHO05D005814 7.7e-67 258.1 275 50.9
Aqoxy5G01066 Aquilegia oxysepala HOM05D004823 ORTHO05D005814 1.7e-66 256.9 271 50.9
CSS0005414 Camellia sinensis var. sinensis HOM05D004823 ORTHO05D005814 2.2e-66 256.5 275 50.9
Oeu034864.1 Olea europaea HOM05D004823 ORTHO05D005814 6.5e-66 255.0 241 51.0
Aqoxy7G00645 Aquilegia oxysepala HOM05D004823 ORTHO05D005814 8.5e-66 254.6 271 50.9
Haze_02925 Corylus avellana HOM05D004823 ORTHO05D005814 3.2e-65 252.7 249 53.4
Dinv31197 Davidia involucrata HOM05D004823 ORTHO05D005814 1.4e-63 247.3 275 49.8
EL10Ac8g19253 Beta vulgaris HOM05D004823 ORTHO05D005814 8.8e-63 244.6 245 51.0
QL04p025376 Quercus lobata HOM05D004823 ORTHO05D005814 1.2e-62 244.2 249 51.4
HanXRQChr08g0226321 Helianthus annuus HOM05D004823 ORTHO05D005814 4.4e-62 242.3 275 51.3
Cc00_g16960 Coffea canephora HOM05D004823 ORTHO05D005814 7.5e-62 241.5 248 53.2
Lsat_1_v5_gn_4_44681 Lactuca sativa HOM05D004823 ORTHO05D005814 9.8e-62 241.1 290 46.6
vmacro21094 Vaccinium macrocarpon HOM05D004823 ORTHO05D005814 4.8e-61 238.8 281 48.4
ATR0705G006 Amborella trichopoda HOM05D004823 ORTHO05D005814 1.1e-60 237.7 277 48.0
Manes.05G060200 Manihot esculenta HOM05D004823 ORTHO05D005814 1.4e-60 237.3 275 46.2
COL.COLO4_19317 Corchorus olitorius HOM05D004823 ORTHO05D005814 3.1e-60 236.1 270 48.5
Potri.014G180200 Populus trichocarpa HOM05D004823 ORTHO05D005814 4.1e-60 235.7 271 46.9
Eucgr.D01139 Eucalyptus grandis HOM05D004823 ORTHO05D005814 5.4e-60 235.3 275 46.9
TWI23G0233 Tripterygium wilfordii HOM05D004823 ORTHO05D005814 9.1e-60 234.6 278 47.8
Rhsim01G0145100 Rhododendron simsii HOM05D004823 ORTHO05D005814 1.6e-59 233.8 289 46.7
Hund17140 Selenicereus undatus HOM05D004823 ORTHO05D005814 1.6e-59 233.8 274 44.9
Cfa011006 Carpinus fangiana HOM05D004823 ORTHO05D005814 2.0e-59 233.4 276 47.8
Sabra14G0140300 Salix brachista HOM05D004823 ORTHO05D005814 3.5e-59 232.6 279 45.2
HPP92_003322 Vanilla planifolia HOM05D004823 ORTHO05D005814 3.5e-59 232.6 272 46.3
Peaxi162Scf01124g00124 Petunia axillaris HOM05D004823 ORTHO05D005814 4.5e-59 232.3 239 51.9
ECA234G1924 Erigeron canadensis HOM05D004823 ORTHO05D005814 5.9e-59 231.9 233 52.4
PSO063G2621 Papaver somniferum HOM05D004823 ORTHO05D005814 5.9e-59 231.9 274 46.7
Lj1g0025017 Lotus japonicus HOM05D004823 ORTHO05D005814 2.9e-58 229.6 268 47.8
HPP92_003324 Vanilla planifolia HOM05D004823 ORTHO05D005814 2.9e-58 229.6 272 46.3
Sc08g0006560 Simmondsia chinensis HOM05D004823 ORTHO05D005814 6.6e-58 228.4 279 43.7
Duzib106G1753 Durio zibethinus HOM05D004823 ORTHO05D005814 8.6e-58 228.0 275 46.5
Glyma.06G310500 Glycine max HOM05D004823 ORTHO05D005814 8.6e-58 228.0 270 47.0
Lalb_Chr03g0040711 Lupinus albus HOM05D004823 ORTHO05D005814 8.6e-58 228.0 266 46.6
Sopen01g035210 Solanum pennellii HOM05D004823 ORTHO05D005814 8.6e-58 228.0 275 46.5
PGR083G0266 Punica granatum HOM05D004823 ORTHO05D005814 1.1e-57 227.6 272 46.3
Thecc.10G001100 Theobroma cacao HOM05D004823 ORTHO05D005814 1.1e-57 227.6 280 46.8
Migut.B01471 Erythranthe guttata HOM05D004823 ORTHO05D005814 1.5e-57 227.3 271 46.9
Solyc01g088380.3 Solanum lycopersicum HOM05D004823 ORTHO05D005814 1.5e-57 227.3 275 46.5
Carub.0001s0819 Capsella rubella HOM05D004823 ORTHO05D005814 3.3e-57 226.1 279 45.5
Gohir.D04G072675 Gossypium hirsutum HOM05D004823 ORTHO05D005814 4.2e-57 225.7 280 45.7
Gorai.012G081700 Gossypium raimondii HOM05D004823 ORTHO05D005814 4.2e-57 225.7 280 45.7
A09p65740 Brassica napus HOM05D004823 ORTHO05D005814 5.5e-57 225.3 271 45.0
BraA09t41917Z Brassica rapa HOM05D004823 ORTHO05D005814 5.5e-57 225.3 271 45.0
Ca_04616_v3 Cicer arietinum L. HOM05D004823 ORTHO05D005814 5.5e-57 225.3 265 46.0
Gohir.A05G333800 Gossypium hirsutum HOM05D004823 ORTHO05D005814 7.2e-57 224.9 280 46.4
AL1G19270 Arabidopsis lyrata HOM05D004823 ORTHO05D005814 9.5e-57 224.6 271 45.4
AT1G08840 Arabidopsis thaliana HOM05D004823 ORTHO05D005814 9.5e-57 224.6 275 45.5
C08p49810 Brassica napus HOM05D004823 ORTHO05D005814 9.5e-57 224.6 275 44.7
DCAR_029534 Daucus carota HOM05D004823 ORTHO05D005814 1.2e-56 224.2 276 45.3
BcaC07g41923 Brassica carinata HOM05D004823 ORTHO05D005814 2.1e-56 223.4 275 44.7
Sp1g07480 Schrenkiella parvula HOM05D004823 ORTHO05D005814 2.1e-56 223.4 246 49.2
BolC8t52508H Brassica oleracea HOM05D004823 ORTHO05D005814 2.8e-56 223.0 275 44.7
CAN.G1480.3 Capsicum annuum HOM05D004823 ORTHO05D005814 2.8e-56 223.0 275 45.5
CARHR008760 Cardamine hirsuta HOM05D004823 ORTHO05D005814 3.6e-56 222.6 271 45.0
Psat3g163800 Pisum sativum HOM05D004823 ORTHO05D005814 1.0e-55 221.1 272 46.0
arahy.Tifrunner.gnm1.ann1.GG1KFP Arachis hypogaea HOM05D004823 ORTHO05D005814 1.4e-55 220.7 255 47.5
Thhalv10006571m.g Eutrema salsugineum HOM05D004823 ORTHO05D005814 1.8e-55 220.3 271 44.6
Medtr7g034575 Medicago truncatula HOM05D004823 ORTHO05D005814 2.3e-55 219.9 273 45.8
CANSAT21G1834 Cannabis sativa HOM05D004823 ORTHO05D005814 5.2e-55 218.8 271 45.8
CiPaw.14G012800 Carya illinoinensis HOM05D004823 ORTHO05D005814 8.9e-55 218.0 274 45.6
MD07G1085900 Malus domestica HOM05D004823 ORTHO05D005814 1.5e-54 217.2 270 44.1
RcHm_v2.0_Chr1g0343241 Rosa chinensis HOM05D004823 ORTHO05D005814 1.3e-53 214.2 284 43.7
Prupe.2G112200 Prunus persica HOM05D004823 ORTHO05D005814 3.7e-53 212.6 271 45.0
Atru.chr5.23 Acer truncatum HOM05D004823 ORTHO05D005814 4.9e-53 212.2 269 44.2
Atru.chr5.51 Acer truncatum HOM05D004823 ORTHO05D005814 4.9e-53 212.2 269 44.2
Sed0025177 Sechium edule HOM05D004823 ORTHO05D005814 4.9e-53 212.2 271 42.1
Ah.15g091500 Amaranthus hybridus HOM05D004823 ORTHO05D005814 8.3e-53 211.5 201 55.2
FvH4_7g08480 Fragaria vesca HOM05D004823 ORTHO05D005814 8.3e-53 211.5 272 42.6
Peaxi162Scf00417g00039 Petunia axillaris HOM05D004823 ORTHO05D005814 1.8e-52 210.3 237 49.4
THA.LOC104808236 Tarenaya hassleriana HOM05D004823 ORTHO05D005814 3.1e-52 209.5 277 44.8
FAN10G1986 Fragaria x ananassa HOM05D004823 ORTHO05D005814 7.0e-52 208.4 284 41.5
TPR.G14862 Trifolium pratense HOM05D004823 ORTHO05D005814 7.0e-52 208.4 265 44.9
FAN10G0616 Fragaria x ananassa HOM05D004823 ORTHO05D005814 9.2e-52 208.0 284 40.8
FAN06G0930 Fragaria x ananassa HOM05D004823 ORTHO05D005814 4.5e-51 205.7 288 40.3
CsaV3_3G010270 Cucumis sativus L. HOM05D004823 ORTHO05D005814 1.0e-50 204.5 271 42.4
FAN03G0722 Fragaria x ananassa HOM05D004823 ORTHO05D005814 1.3e-50 204.1 299 40.5
Nitab4.5_0006227g0020 Nicotiana tabacum HOM05D004823 ORTHO05D005814 1.7e-50 203.8 314 40.4
VMungo1080G1086 Vigna mungo HOM05D004823 ORTHO05D005814 8.6e-50 201.4 268 41.8
Zm00001eb072560 Zea mays HOM05D004823 ORTHO05D005814 1.5e-49 200.7 275 44.4
arahy.Tifrunner.gnm1.ann1.61K3Y7 Arachis hypogaea HOM05D004823 ORTHO05D005814 1.6e-48 197.2 251 43.4
SGA_v2.0_scaffold578G53026 Striga asiatica HOM05D004823 ORTHO05D005814 1.6e-48 197.2 136 68.4
Phvul.005G016100 Phaseolus vulgaris HOM05D004823 ORTHO05D005814 6.1e-48 195.3 268 40.7
PSO782G4318 Papaver somniferum HOM05D004823 ORTHO05D005814 1.0e-47 194.5 277 43.0
AUR62023352 Chenopodium quinoa HOM05D004823 ORTHO05D005814 6.8e-47 191.8 261 42.1
MELO3C006248.2 Cucumis melo HOM05D004823 ORTHO05D005814 4.4e-46 189.1 272 40.1
Mapoly0039s0120 Marchantia polymorpha HOM05D004823 ORTHO05D005814 7.5e-46 188.3 272 40.8
SHI13671 Sapria himalayana HOM05D004823 ORTHO05D005814 7.5e-46 188.3 286 40.2
AagrBONN_evm.TU.Sc2ySwM_362.2737 Anthoceros agrestis HOM05D004823 ORTHO05D005814 3.2e-44 183.0 230 40.9
AUR62013806 Chenopodium quinoa HOM05D004823 ORTHO05D005814 8.6e-42 174.9 202 46.0
Aa31sc17G210 Aethionema arabicum HOM05D004823 ORTHO05D005814 1.5e-41 174.1 270 40.7
Os04g0588200 Oryza sativa ssp. japonica HOM05D004823 ORTHO05D005814 1.2e-40 171.0 275 41.1
GSVIVG01018404001 Vitis vinifera HOM05D004823 ORTHO05D005814 1.5e-38 164.1 140 59.3
Ciclev10018521m.g Citrus clementina HOM05D004823 ORTHO05D005814 1.7e-34 150.6 260 39.2
Nitab4.5_0013532g0020 Nicotiana tabacum HOM05D004823 ORTHO05D005814 3.0e-34 149.8 285 36.5
RcHm_v2.0_Chr2g0122971 Rosa chinensis HOM05D004823 ORTHO05D005814 3.0e-34 149.8 155 50.3
ClCG05G002760 Citrullus lanatus HOM05D004823 ORTHO05D005814 7.3e-33 145.2 316 32.9
unitig_8.g3844 Utricularia gibba HOM05D004823 ORTHO05D005814 1.8e-31 140.6 253 39.1
CBR_g41486 Chara braunii HOM05D004823 ORTHO05D005814 1.4e-28 131.0 235 33.6
CARHR086610 Cardamine hirsuta HOM05D004823 ORTHO05D005814 1.1e-25 121.3 142 50.7
Cfa026676 Carpinus fangiana HOM05D004823 ORTHO05D005814 1.8e-23 114.0 226 31.9
Nn2g14687 Nelumbo nucifera HOM05D004823 ORTHO05D005814 2.4e-23 113.6 75 70.7
PRCOL_00002243 Prasinoderma coloniale HOM05D004823 ORTHO05D005814 2.6e-14 83.6 134 39.6
Lj7C553G7 Lonicera japonica HOM05D004823 ORTHO05D005814 7.6e-14 82.0 150 40.7
GSVIVG01018406001 Vitis vinifera HOM05D004823 ORTHO05D005814 1.7e-13 80.9 138 34.1
SEGI_26005 Sequoiadendron giganteum HOM05D004823 ORTHO05D005814 8.7e-10 68.6 94 36.2
AagrBONN_evm.TU.Sc2ySwM_344.4182 Anthoceros agrestis HOM05D004823 ORTHO05D072592 9.0e-07 58.5 95 34.7
Cre12.g528200 Chlamydomonas reinhardtii HOM05D004823 ORTHO05D005814 3.4e-06 56.6 181 24.9


User provided reference genes

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