Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0092 Ceratophyllum demersum HOM05D005462 ORTHO05D006718 3.6e-111 406.0 429 100.0
Nitab4.5_0003787g0050 Nicotiana tabacum HOM05D005462 ORTHO05D006718 2.2e-44 184.1 262 72.9
Ca_13242_v3 Cicer arietinum L. HOM05D005462 ORTHO05D006718 6.5e-36 156.0 210 85.7
MBI01_g28354_MAGBIO Magnolia biondii HOM05D005462 ORTHO05D006718 1.2e-34 151.8 205 84.9
CSS0018603 Camellia sinensis var. sinensis HOM05D005462 ORTHO05D006718 8.8e-33 145.6 211 80.6
Peaxi162Scf00125g00414 Petunia axillaris HOM05D005462 ORTHO05D006718 8.8e-33 145.6 254 50.4
arahy.Tifrunner.gnm1.ann1.LTKS6Y Arachis hypogaea HOM05D005462 ORTHO05D006718 2.6e-32 144.1 209 57.4
Ah.04g150500 Amaranthus hybridus HOM05D005462 ORTHO05D006718 1.7e-31 141.4 210 79.5
Sabra08G0010900 Salix brachista HOM05D005462 ORTHO05D006718 2.8e-31 140.6 216 39.4
ATR0772G220 Amborella trichopoda HOM05D005462 ORTHO05D006718 1.2e-29 135.2 80 77.5
THA.LOC104823152 Tarenaya hassleriana HOM05D005462 ORTHO05D006718 2.3e-28 131.0 211 52.6
HPP92_027470 Vanilla planifolia HOM05D005462 ORTHO05D006718 3.8e-28 130.2 78 74.4
Manes.07G085300 Manihot esculenta HOM05D005462 ORTHO05D006718 2.5e-27 127.5 78 76.9
Ca_30156_v3 Cicer arietinum L. HOM05D005462 ORTHO05D006718 5.5e-27 126.3 80 71.2
Nn2g14251 Nelumbo nucifera HOM05D005462 ORTHO05D006718 5.5e-27 126.3 80 70.0
Lalb_Chr01g0010721 Lupinus albus HOM05D005462 ORTHO05D006718 7.2e-27 125.9 77 74.0
VMungo0720G0270 Vigna mungo HOM05D005462 ORTHO05D006718 7.2e-27 125.9 80 73.8
Lj6g0019256 Lotus japonicus HOM05D005462 ORTHO05D006718 1.6e-26 124.8 80 68.8
arahy.Tifrunner.gnm1.ann1.1Q3Q3C Arachis hypogaea HOM05D005462 ORTHO05D006718 2.1e-26 124.4 79 70.9
arahy.Tifrunner.gnm1.ann1.D9T4RB Arachis hypogaea HOM05D005462 ORTHO05D006718 2.1e-26 124.4 79 70.9
Glyma.20G074200 Glycine max HOM05D005462 ORTHO05D006718 2.1e-26 124.4 80 72.5
Phvul.007G234900 Phaseolus vulgaris HOM05D005462 ORTHO05D006718 2.1e-26 124.4 80 72.5
CiPaw.13G042600 Carya illinoinensis HOM05D005462 ORTHO05D006718 3.6e-26 123.6 81 67.9
Dinv08599 Davidia involucrata HOM05D005462 ORTHO05D006718 3.6e-26 123.6 81 71.6
Os04g0684500 Oryza sativa ssp. japonica HOM05D005462 ORTHO05D006718 3.6e-26 123.6 78 69.2
Medtr1g048080 Medicago truncatula HOM05D005462 ORTHO05D006718 8.0e-26 122.5 79 67.1
Potri.010G241300 Populus trichocarpa HOM05D005462 ORTHO05D006718 8.0e-26 122.5 79 72.2
GSVIVG01034651001 Vitis vinifera HOM05D005462 ORTHO05D006718 1.4e-25 121.7 78 70.5
Actinidia03844 Actinidia chinensis HOM05D005462 ORTHO05D006718 1.8e-25 121.3 81 70.4
ClCG05G021870 Citrullus lanatus HOM05D005462 ORTHO05D006718 2.3e-25 120.9 81 66.7
Eucgr.G02683 Eucalyptus grandis HOM05D005462 ORTHO05D006718 2.3e-25 120.9 81 67.9
SEGI_04507 Sequoiadendron giganteum HOM05D005462 ORTHO05D006718 2.3e-25 120.9 80 65.0
Zm00001eb434090 Zea mays HOM05D005462 ORTHO05D006718 4.0e-25 120.2 77 68.8
Potri.008G017400 Populus trichocarpa HOM05D005462 ORTHO05D006718 5.2e-25 119.8 79 70.9
Sc09g0005160 Simmondsia chinensis HOM05D005462 ORTHO05D006718 6.8e-25 119.4 80 68.8
HPP92_013816 Vanilla planifolia HOM05D005462 ORTHO05D006718 6.8e-25 119.4 73 74.0
Hma1.2p1_0834F.1_g225780 Hydrangea macrophylla HOM05D005462 ORTHO05D006718 1.2e-24 118.6 81 66.7
TAR636G3557 Trochodendron aralioides HOM05D005462 ORTHO05D006718 1.2e-24 118.6 81 66.7
CANSAT56G2776 Cannabis sativa HOM05D005462 ORTHO05D006718 1.5e-24 118.2 76 68.4
Cfa010538 Carpinus fangiana HOM05D005462 ORTHO05D006718 1.5e-24 118.2 81 65.4
Sabra10G0188800 Salix brachista HOM05D005462 ORTHO05D006718 1.5e-24 118.2 292 51.7
TPR.G19815 Trifolium pratense HOM05D005462 ORTHO05D006718 1.5e-24 118.2 80 65.0
EL10Ac3g07311 Beta vulgaris HOM05D005462 ORTHO05D006718 2.6e-24 117.5 80 66.2
DCAR_028403 Daucus carota HOM05D005462 ORTHO05D006718 2.6e-24 117.5 81 64.2
Lj2C34T7 Lonicera japonica HOM05D005462 ORTHO05D006718 2.6e-24 117.5 81 66.7
CAN.G143.13 Capsicum annuum HOM05D005462 ORTHO05D006718 3.4e-24 117.1 81 64.2
HanXRQChr11g0321421 Helianthus annuus HOM05D005462 ORTHO05D006718 3.4e-24 117.1 81 66.7
Aqoxy4G02697 Aquilegia oxysepala HOM05D005462 ORTHO05D006718 4.4e-24 116.7 81 64.2
AUR62021021 Chenopodium quinoa HOM05D005462 ORTHO05D006718 4.4e-24 116.7 80 66.2
Cc02_g09510 Coffea canephora HOM05D005462 ORTHO05D006718 4.4e-24 116.7 79 67.1
TWI15G0792 Tripterygium wilfordii HOM05D005462 ORTHO05D006718 4.4e-24 116.7 81 67.9
EL10Ac3g07337 Beta vulgaris HOM05D005462 ORTHO05D006718 5.7e-24 116.3 80 65.0
Sed0013359 Sechium edule HOM05D005462 ORTHO05D006718 5.7e-24 116.3 81 64.2
MELO3C012341.2 Cucumis melo HOM05D005462 ORTHO05D006718 7.5e-24 115.9 78 66.7
PGSC0003DMG401007600 Solanum tuberosum HOM05D005462 ORTHO05D006718 9.8e-24 115.5 81 63.0
Atru.chr12.1058 Acer truncatum HOM05D005462 ORTHO05D006718 1.3e-23 115.2 80 62.5
Prupe.2G071400 Prunus persica HOM05D005462 ORTHO05D006718 1.3e-23 115.2 81 64.2
Solyc11g006680.3 Solanum lycopersicum HOM05D005462 ORTHO05D006718 1.3e-23 115.2 81 63.0
Cpa.g.sc54.12 Carica papaya HOM05D005462 ORTHO05D006718 1.7e-23 114.8 79 65.8
CsaV3_5G035270 Cucumis sativus L. HOM05D005462 ORTHO05D006718 1.7e-23 114.8 78 66.7
Hund06792 Selenicereus undatus HOM05D005462 ORTHO05D006718 1.7e-23 114.8 80 65.0
Sopen11g002610 Solanum pennellii HOM05D005462 ORTHO05D006718 2.2e-23 114.4 81 63.0
EL10Ac3g07314 Beta vulgaris HOM05D005462 ORTHO05D006718 2.9e-23 114.0 80 63.8
MD07G1061700 Malus domestica HOM05D005462 ORTHO05D006718 2.9e-23 114.0 81 64.2
PSO384G2581 Papaver somniferum HOM05D005462 ORTHO05D006718 2.9e-23 114.0 81 63.0
QL04p046981 Quercus lobata HOM05D005462 ORTHO05D006718 2.9e-23 114.0 76 68.4
Ciclev10014488m.g Citrus clementina HOM05D005462 ORTHO05D006718 3.7e-23 113.6 80 63.8
ECA232G2701 Erigeron canadensis HOM05D005462 ORTHO05D006718 3.7e-23 113.6 81 63.0
RcHm_v2.0_Chr1g0336351 Rosa chinensis HOM05D005462 ORTHO05D006718 4.9e-23 113.2 78 66.7
SalBow3G0159 Salvia bowleyana HOM05D005462 ORTHO05D006718 4.9e-23 113.2 80 63.8
Oeu033986.1 Olea europaea HOM05D005462 ORTHO05D006718 6.3e-23 112.8 78 65.4
Thecc.10G115600 Theobroma cacao HOM05D005462 ORTHO05D006718 6.3e-23 112.8 78 66.7
COL.COLO4_07193 Corchorus olitorius HOM05D005462 ORTHO05D006718 8.3e-23 112.5 78 66.7
PGR142G1862 Punica granatum HOM05D005462 ORTHO05D006718 1.8e-22 111.3 80 65.0
FvH4_7g06690 Fragaria vesca HOM05D005462 ORTHO05D006718 2.4e-22 110.9 78 65.4
FAN10G0457 Fragaria x ananassa HOM05D005462 ORTHO05D006718 2.4e-22 110.9 78 65.4
FAN03G2522 Fragaria x ananassa HOM05D005462 ORTHO05D006718 5.4e-22 109.8 78 64.1
PSO339G2458 Papaver somniferum HOM05D005462 ORTHO05D006718 5.4e-22 109.8 81 60.5
FAN06G4410 Fragaria x ananassa HOM05D005462 ORTHO05D006718 1.2e-21 108.6 78 64.1
Gohir.A13G009500 Gossypium hirsutum HOM05D005462 ORTHO05D006718 1.2e-21 108.6 78 62.8
Gohir.D13G010200 Gossypium hirsutum HOM05D005462 ORTHO05D006718 1.2e-21 108.6 78 62.8
Gorai.013G010900 Gossypium raimondii HOM05D005462 ORTHO05D006718 1.2e-21 108.6 78 62.8
Aa31LG11G5620 Aethionema arabicum HOM05D005462 ORTHO05D000003 1.6e-21 108.2 78 66.7
Duzib128G2019 Durio zibethinus HOM05D005462 ORTHO05D006718 2.0e-21 107.8 77 64.9
AT5G04810 Arabidopsis thaliana HOM05D005462 ORTHO05D006718 3.9e-20 103.6 78 64.1
BcaC06g32185 Brassica carinata HOM05D005462 ORTHO05D006718 3.9e-20 103.6 78 65.4
Carub.0006s0369 Capsella rubella HOM05D005462 ORTHO05D006718 3.9e-20 103.6 78 64.1
Sp6g38020 Schrenkiella parvula HOM05D005462 ORTHO05D006718 3.9e-20 103.6 78 65.4
PGSC0003DMG400016997 Solanum tuberosum HOM05D005462 ORTHO05D006718 5.0e-20 103.2 81 58.0
AL6G14460 Arabidopsis lyrata HOM05D005462 ORTHO05D006718 8.6e-20 102.4 78 62.8
A10p31410 Brassica napus HOM05D005462 ORTHO05D006718 1.1e-19 102.1 78 64.1
BraA10t45187Z Brassica rapa HOM05D005462 ORTHO05D006718 1.1e-19 102.1 78 64.1
CAN.G186.57 Capsicum annuum HOM05D005462 ORTHO05D006718 1.1e-19 102.1 77 61.0
C09p72080 Brassica napus HOM05D005462 ORTHO05D006718 1.9e-19 101.3 78 62.8
BolC9t59953H Brassica oleracea HOM05D005462 ORTHO05D006718 1.9e-19 101.3 78 62.8
Thhalv10012596m.g Eutrema salsugineum HOM05D005462 ORTHO05D006718 2.5e-19 100.9 78 64.1
Solyc04g009720.1 Solanum lycopersicum HOM05D005462 ORTHO05D006718 3.3e-19 100.5 81 55.6
SGA_v2.0_scaffold329G48874 Striga asiatica HOM05D005462 ORTHO05D006718 3.3e-19 100.5 281 57.3
Migut.F00860 Erythranthe guttata HOM05D005462 ORTHO05D006718 1.6e-18 98.2 81 56.8
Sopen04g004840 Solanum pennellii HOM05D005462 ORTHO05D006718 1.6e-18 98.2 81 54.3
MSTRG.27558 Avicennia marina HOM05D005462 ORTHO05D006718 4.0e-17 93.6 80 56.2
AagrBONN_evm.TU.Sc2ySwM_362.2024 Anthoceros agrestis HOM05D005462 ORTHO05D006718 1.5e-16 91.7 80 53.8
Pp3c16_280 Physcomitrium patens HOM05D005462 ORTHO05D006718 7.0e-14 82.8 77 49.4
CDE06G2100 Ceratophyllum demersum HOM05D005462 ORTHO05D006718 2.7e-13 80.9 39 100.0
vmacro07266 Vaccinium macrocarpon HOM05D005462 ORTHO05D006718 1.3e-12 78.6 428 49.5
HPP92_027469 Vanilla planifolia HOM05D005462 ORTHO05D006718 3.9e-12 77.0 215 72.1
CSS0015574 Camellia sinensis var. sinensis HOM05D005462 ORTHO05D006718 5.6e-11 73.2 52 67.3
Mapoly0061s0009 Marchantia polymorpha HOM05D005462 ORTHO05D006718 3.6e-10 70.5 78 44.9
MBI01_g28355_MAGBIO Magnolia biondii HOM05D005462 ORTHO05D006718 6.2e-10 69.7 47 70.2
Solyc04g009730.4 Solanum lycopersicum HOM05D005462 ORTHO05D006718 6.2e-10 69.7 37 81.1
SMO165G0125 Selaginella moellendorffii HOM05D005462 ORTHO05D006718 4.0e-09 67.0 68 45.6
SMO272G0004 Selaginella moellendorffii HOM05D005462 ORTHO05D006718 4.0e-09 67.0 68 45.6
Pp3c5_10110 Physcomitrium patens HOM05D005462 ORTHO05D006718 6.8e-09 66.2 80 38.8
Lsat_1_v5_gn_9_53421 Lactuca sativa HOM05D005462 ORTHO05D006718 2.0e-08 64.7 37 73.0
AUR62018420 Chenopodium quinoa HOM05D005462 ORTHO05D006718 2.6e-08 64.3 95 38.9
Haze_03474 Corylus avellana HOM05D005462 ORTHO05D006718 4.4e-08 63.5 37 75.7
Haze_03485 Corylus avellana HOM05D005462 ORTHO05D006718 9.8e-08 62.4 40 75.0
Psat0s3982g0040 Pisum sativum HOM05D005462 ORTHO05D006718 4.9e-07 60.1 146 65.8
Peaxi162Scf00195g01111 Petunia axillaris HOM05D005462 ORTHO05D006718 6.4e-07 59.7 40 70.0
CBR_g70711 Chara braunii HOM05D005462 ORTHO05D006718 1.9e-06 58.2 81 38.3
Oeu033987.1 Olea europaea HOM05D005462 ORTHO05D006718 3.2e-06 57.4 39 66.7
PGSC0003DMG402007600 Solanum tuberosum HOM05D005462 ORTHO05D006718 5.4e-06 56.6 39 66.7


User provided reference genes

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