Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2779 Ceratophyllum demersum HOM05D006139 ORTHO05D007681 6.7e-232 807.0 406 100.0
Hma1.2p1_0412F.1_g147150 Hydrangea macrophylla HOM05D006139 ORTHO05D007681 8.6e-155 550.8 441 64.9
Aqoxy2G03950 Aquilegia oxysepala HOM05D006139 ORTHO05D007681 7.3e-154 547.7 441 63.9
CSS0045945 Camellia sinensis var. sinensis HOM05D006139 ORTHO05D007681 3.6e-153 545.4 444 63.5
Nn3g20967 Nelumbo nucifera HOM05D006139 ORTHO05D007681 6.2e-153 544.7 441 64.4
GSVIVG01031668001 Vitis vinifera HOM05D006139 ORTHO05D007681 3.1e-152 542.3 441 64.2
Sopen09g036170 Solanum pennellii HOM05D006139 ORTHO05D007681 2.6e-151 539.3 441 63.9
Prupe.1G178000 Prunus persica HOM05D006139 ORTHO05D007681 8.4e-150 534.3 441 62.6
Potri.011G107400 Populus trichocarpa HOM05D006139 ORTHO05D007681 1.9e-149 533.1 441 62.1
Solyc09g098230.3 Solanum lycopersicum HOM05D006139 ORTHO05D007681 1.9e-149 533.1 441 63.3
Sc22g0003230 Simmondsia chinensis HOM05D006139 ORTHO05D007681 2.7e-148 529.3 441 63.7
QL10p044141 Quercus lobata HOM05D006139 ORTHO05D007681 6.0e-148 528.1 474 59.5
Cc03_g10570 Coffea canephora HOM05D006139 ORTHO05D007681 1.7e-147 526.6 441 61.2
Manes.03G099000 Manihot esculenta HOM05D006139 ORTHO05D007681 5.1e-147 525.0 441 61.5
RcHm_v2.0_Chr4g0409801 Rosa chinensis HOM05D006139 ORTHO05D007681 6.6e-147 524.6 441 61.9
Lalb_Chr06g0164661 Lupinus albus HOM05D006139 ORTHO05D007681 8.7e-147 524.2 441 61.5
CANSAT11G1108 Cannabis sativa HOM05D006139 ORTHO05D007681 1.1e-146 523.9 441 61.9
Ciclev10019318m.g Citrus clementina HOM05D006139 ORTHO05D007681 1.5e-146 523.5 441 61.5
Eucgr.F03241 Eucalyptus grandis HOM05D006139 ORTHO05D007681 1.6e-145 520.0 441 59.6
MD13G1278700 Malus domestica HOM05D006139 ORTHO05D007681 1.6e-145 520.0 441 61.2
SGA_v2.0_scaffold109G31142 Striga asiatica HOM05D006139 ORTHO05D007681 2.1e-145 519.6 441 61.5
PSO675G6876 Papaver somniferum HOM05D006139 ORTHO05D007681 4.7e-145 518.5 440 60.5
CsaV3_4G003770 Cucumis sativus L. HOM05D006139 ORTHO05D007681 6.2e-145 518.1 441 60.8
Lj4A728T41 Lonicera japonica HOM05D006139 ORTHO05D007681 1.4e-144 516.9 411 64.5
MELO3C017678.2 Cucumis melo HOM05D006139 ORTHO05D007681 2.4e-144 516.2 441 60.5
arahy.Tifrunner.gnm1.ann1.46LBLY Arachis hypogaea HOM05D006139 ORTHO05D007681 4.0e-144 515.4 441 61.9
PSO017G2886 Papaver somniferum HOM05D006139 ORTHO05D007681 4.0e-144 515.4 440 60.5
FvH4_4g12150 Fragaria vesca HOM05D006139 ORTHO05D007681 2.6e-143 512.7 441 60.3
FAN12G2778 Fragaria x ananassa HOM05D006139 ORTHO05D007681 2.6e-143 512.7 441 60.3
Zm00001eb116810 Zea mays HOM05D006139 ORTHO05D007681 7.6e-143 511.1 441 57.8
Sabra11G0095200 Salix brachista HOM05D006139 ORTHO05D007681 2.9e-142 509.2 449 59.7
MSTRG.17865 Avicennia marina HOM05D006139 ORTHO05D007681 3.8e-142 508.8 441 61.7
HPP92_015930 Vanilla planifolia HOM05D006139 ORTHO05D007681 1.4e-141 506.9 441 60.5
Duzib213G0841 Durio zibethinus HOM05D006139 ORTHO05D007681 2.4e-141 506.1 441 59.6
ECA246G3778 Erigeron canadensis HOM05D006139 ORTHO05D007681 3.2e-141 505.8 441 60.1
Psat6g243280 Pisum sativum HOM05D006139 ORTHO05D007681 4.2e-141 505.4 441 59.6
Sed0017452 Sechium edule HOM05D006139 ORTHO05D007681 4.2e-141 505.4 441 58.5
TWI38G2388 Tripterygium wilfordii HOM05D006139 ORTHO05D007681 4.2e-141 505.4 439 61.5
TAR365G1167 Trochodendron aralioides HOM05D006139 ORTHO05D007681 1.2e-140 503.8 416 63.0
Migut.N00440 Erythranthe guttata HOM05D006139 ORTHO05D007681 1.6e-140 503.4 441 59.9
Lsat_1_v5_gn_3_24941 Lactuca sativa HOM05D006139 ORTHO05D007681 1.6e-140 503.4 441 59.9
Thecc.07G123700 Theobroma cacao HOM05D006139 ORTHO05D007681 3.5e-140 502.3 441 60.1
Glyma.20G248800 Glycine max HOM05D006139 ORTHO05D007681 1.0e-139 500.7 441 59.4
Rhsim07G0086500 Rhododendron simsii HOM05D006139 ORTHO05D007681 3.0e-139 499.2 471 56.9
CiPaw.01G108300 Carya illinoinensis HOM05D006139 ORTHO05D007681 5.1e-139 498.4 440 60.7
Medtr1g116980 Medicago truncatula HOM05D006139 ORTHO05D007681 6.6e-139 498.0 441 59.6
AUR62003718 Chenopodium quinoa HOM05D006139 ORTHO05D007681 2.1e-137 493.0 446 58.7
VMungo0720G1636 Vigna mungo HOM05D006139 ORTHO05D007681 5.3e-136 488.4 441 57.6
Lj5g0023092 Lotus japonicus HOM05D006139 ORTHO05D007681 3.4e-135 485.7 441 58.5
Gohir.A01G052100 Gossypium hirsutum HOM05D006139 ORTHO05D007681 3.8e-134 482.3 441 58.0
Gorai.002G052100 Gossypium raimondii HOM05D006139 ORTHO05D007681 1.1e-133 480.7 441 57.6
Phvul.007G001600 Phaseolus vulgaris HOM05D006139 ORTHO05D007681 7.1e-133 478.0 441 57.8
MBI07_g00628_MAGBIO Magnolia biondii HOM05D006139 ORTHO05D007681 2.1e-132 476.5 406 62.3
PGR031G2404 Punica granatum HOM05D006139 ORTHO05D007681 1.8e-131 473.4 441 56.2
vmacro13984 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 3.0e-131 472.6 531 50.1
ATR0609G005 Amborella trichopoda HOM05D006139 ORTHO05D007681 1.9e-130 469.9 443 56.9
Hund19684 Selenicereus undatus HOM05D006139 ORTHO05D007681 1.9e-130 469.9 441 58.5
A06p12870 Brassica napus HOM05D006139 ORTHO05D007681 3.7e-129 465.7 441 54.4
BcaB02g06659 Brassica carinata HOM05D006139 ORTHO05D007681 4.8e-129 465.3 441 54.9
BcaC05g25552 Brassica carinata HOM05D006139 ORTHO05D007681 8.1e-129 464.5 441 54.4
Nitab4.5_0001526g0130 Nicotiana tabacum HOM05D006139 ORTHO05D007681 8.1e-129 464.5 406 61.3
C05p15280 Brassica napus HOM05D006139 ORTHO05D007681 1.1e-128 464.2 441 54.4
Haze_11079 Corylus avellana HOM05D006139 ORTHO05D007681 1.1e-128 464.2 406 61.3
AT1G16970 Arabidopsis thaliana HOM05D006139 ORTHO05D007681 2.4e-128 463.0 441 54.6
Carub.0001s1670 Capsella rubella HOM05D006139 ORTHO05D007681 2.4e-128 463.0 439 54.7
Sp1g15110 Schrenkiella parvula HOM05D006139 ORTHO05D007681 1.2e-127 460.7 441 54.6
Thhalv10007085m.g Eutrema salsugineum HOM05D006139 ORTHO05D007681 5.8e-127 458.4 441 54.2
CARHR017480 Cardamine hirsuta HOM05D006139 ORTHO05D007681 7.6e-127 458.0 442 54.3
Peaxi162Scf00286g00443 Petunia axillaris HOM05D006139 ORTHO05D007681 3.8e-126 455.7 407 62.2
THA.LOC104812308 Tarenaya hassleriana HOM05D006139 ORTHO05D007681 7.9e-124 448.0 440 54.5
FAN17G0552 Fragaria x ananassa HOM05D006139 ORTHO05D007681 1.8e-123 446.8 441 54.9
FAN07G2792 Fragaria x ananassa HOM05D006139 ORTHO05D007681 2.3e-123 446.4 441 54.9
COL.COLO4_17513 Corchorus olitorius HOM05D006139 ORTHO05D007681 5.1e-123 445.3 424 58.0
AUR62018029 Chenopodium quinoa HOM05D006139 ORTHO05D007681 4.3e-122 442.2 458 55.2
FAN12G0395 Fragaria x ananassa HOM05D006139 ORTHO05D007681 1.4e-120 437.2 453 53.6
Mapoly0113s0020 Marchantia polymorpha HOM05D006139 ORTHO05D007681 4.9e-118 428.7 443 52.4
arahy.Tifrunner.gnm1.ann1.JAL8JD Arachis hypogaea HOM05D006139 ORTHO05D007681 1.9e-117 426.8 448 54.7
Atru.chr2.2053 Acer truncatum HOM05D006139 ORTHO05D007681 3.2e-117 426.0 306 69.6
PGSC0003DMG400014069 Solanum tuberosum HOM05D006139 ORTHO05D007681 3.2e-117 426.0 295 73.9
BraA06t24447Z Brassica rapa HOM05D006139 ORTHO05D007681 7.1e-117 424.9 442 51.8
BolC5t30234H Brassica oleracea HOM05D006139 ORTHO05D007681 7.9e-116 421.4 444 51.6
Gohir.D01G041500 Gossypium hirsutum HOM05D006139 ORTHO05D007681 2.3e-115 419.9 402 55.2
Cpa.g.sc77.50 Carica papaya HOM05D006139 ORTHO05D007681 2.5e-109 399.8 301 66.1
SMO361G0513 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 2.1e-108 396.7 439 47.8
SMO361G0769 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 2.3e-107 393.3 439 47.4
Nitab4.5_0001687g0050 Nicotiana tabacum HOM05D006139 ORTHO05D007681 5.1e-107 392.1 368 57.9
CAN.G710.40 Capsicum annuum HOM05D006139 ORTHO05D007681 7.4e-106 388.3 453 50.8
TPR.G8879 Trifolium pratense HOM05D006139 ORTHO05D007681 2.2e-105 386.7 299 65.6
ClCG07G016640 Citrullus lanatus HOM05D006139 ORTHO05D007681 2.8e-105 386.3 457 49.7
Dinv44237 Davidia involucrata HOM05D006139 ORTHO05D007681 7.7e-103 378.3 304 64.1
AagrBONN_evm.TU.Sc2ySwM_228.1556 Anthoceros agrestis HOM05D006139 ORTHO05D007681 1.5e-98 364.0 443 45.4
CBR_g19434 Chara braunii HOM05D006139 ORTHO05D007681 6.1e-84 315.5 440 40.5
DCAR_005496 Daucus carota HOM05D006139 ORTHO05D007681 9.1e-80 301.6 234 65.4
Pp3c18_7140 Physcomitrium patens HOM05D006139 ORTHO05D007681 8.5e-78 295.0 439 41.9
TPR.G8907 Trifolium pratense HOM05D006139 ORTHO05D007681 2.1e-76 290.4 228 65.8
Aa31LG7G1410 Aethionema arabicum HOM05D006139 ORTHO05D007681 1.3e-65 254.6 413 41.2
Oeu013397.2 Olea europaea HOM05D006139 ORTHO05D007681 1.3e-57 228.0 242 52.5
Ah.03g143030 Amaranthus hybridus HOM05D006139 ORTHO05D007681 5.4e-56 222.6 188 63.3
FAN22G0061 Fragaria x ananassa HOM05D006139 ORTHO05D007681 4.4e-50 203.0 175 60.6
unitig_578.g15954 Utricularia gibba HOM05D006139 ORTHO05D004041 6.4e-49 199.1 168 60.7
Ca_11425_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 7.3e-45 185.7 137 70.8
SHI27652 Sapria himalayana HOM05D006139 ORTHO05D007681 1.7e-41 174.5 218 44.5
Cre13.g607500 Chlamydomonas reinhardtii HOM05D006139 ORTHO05D007681 9.2e-40 168.7 365 33.2
arahy.Tifrunner.gnm1.ann1.6RHH59 Arachis hypogaea HOM05D006139 ORTHO05D007681 5.1e-38 162.9 139 60.4
CANSAT78G0600 Cannabis sativa HOM05D006139 ORTHO05D007681 1.2e-31 141.7 120 58.3
Cfa021664 Carpinus fangiana HOM05D006139 ORTHO05D007681 1.9e-29 134.4 462 27.5
Ca_11424_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 1.4e-27 128.3 106 62.3
TPR.G8868 Trifolium pratense HOM05D006139 ORTHO05D007681 1.3e-25 121.7 142 47.9
MCO14G338 Micromonas commoda HOM05D006139 ORTHO05D007681 1.1e-21 108.6 294 30.6
SEGI_35314 Sequoiadendron giganteum HOM05D006139 ORTHO05D007681 5.6e-21 106.3 142 43.0
SEGI_31905 Sequoiadendron giganteum HOM05D006139 ORTHO05D007681 2.6e-18 97.4 73 57.5
BolC4t22161H Brassica oleracea HOM05D006139 ORTHO05D007681 2.9e-17 94.0 76 60.5
HanXRQChr13g0406711 Helianthus annuus HOM05D006139 ORTHO05D007681 2.1e-15 87.8 53 79.2
Atru.chr2.2052 Acer truncatum HOM05D006139 ORTHO05D007681 2.1e-12 77.8 60 60.0
Os07g0184900 Oryza sativa ssp. japonica HOM05D006139 ORTHO05D007681 2.1e-12 77.8 59 61.0
Dinv25612 Davidia involucrata HOM05D000447 ORTHO05D007681 5.3e-11 73.2 76 53.9
Ca_11423_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 9.0e-11 72.4 56 64.3
DCAR_005495 Daucus carota HOM05D006139 ORTHO05D007681 3.4e-10 70.5 55 61.8
Potri.006G132501 Populus trichocarpa HOM05D006139 ORTHO05D007681 4.9e-09 66.6 80 47.5
vmacro12608 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 8.4e-09 65.9 65 55.4
unitig_578.g15953 Utricularia gibba HOM05D006139 ORTHO05D007681 1.9e-08 64.7 57 54.4


User provided reference genes

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