Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G0114 Ceratophyllum demersum HOM05D003161 ORTHO05D005173 0.0e+00 1223.0 625 100.0
TAR633G1132 Trochodendron aralioides HOM05D003161 ORTHO05D005173 1.8e-212 743.0 601 64.2
GSVIVG01033430001 Vitis vinifera HOM05D003161 ORTHO05D005173 2.6e-211 739.2 608 62.5
Prupe.7G085700 Prunus persica HOM05D003161 ORTHO05D005173 2.9e-210 735.7 606 62.2
Aqoxy2G02393 Aquilegia oxysepala HOM05D003161 ORTHO05D005173 1.4e-209 733.4 595 62.9
Actinidia38605 Actinidia chinensis HOM05D003161 ORTHO05D005173 4.2e-209 731.9 620 61.5
Thecc.05G180200 Theobroma cacao HOM05D003161 ORTHO05D005173 1.0e-207 727.2 612 62.3
Manes.09G040300 Manihot esculenta HOM05D003161 ORTHO05D005173 5.1e-207 724.9 611 61.5
Sabra16G0064500 Salix brachista HOM05D003161 ORTHO05D005173 4.4e-206 721.8 607 61.1
TWI53G1521 Tripterygium wilfordii HOM05D003161 ORTHO05D005173 7.4e-206 721.1 620 61.8
MD12G1051100 Malus domestica HOM05D003161 ORTHO05D005173 3.7e-205 718.8 603 60.7
Potri.016G062600 Populus trichocarpa HOM05D003161 ORTHO05D005173 3.7e-205 718.8 607 61.0
Duzib128G1871 Durio zibethinus HOM05D003161 ORTHO05D005173 6.3e-205 718.0 608 61.0
FvH4_6g21470 Fragaria vesca HOM05D003161 ORTHO05D005173 6.3e-205 718.0 614 60.9
CANSAT64G2741 Cannabis sativa HOM05D003161 ORTHO05D005173 9.1e-204 714.1 608 59.5
Sopen03g011350 Solanum pennellii HOM05D003161 ORTHO05D005173 1.5e-203 713.4 584 63.4
PGR004G2129 Punica granatum HOM05D003161 ORTHO05D005173 1.7e-202 709.9 609 60.6
FAN05G0820 Fragaria x ananassa HOM05D003161 ORTHO05D005173 3.8e-202 708.8 607 61.1
Eucgr.A02507 Eucalyptus grandis HOM05D003161 ORTHO05D005173 4.2e-201 705.3 604 60.8
RcHm_v2.0_Chr3g0478661 Rosa chinensis HOM05D003161 ORTHO05D005173 7.2e-201 704.5 609 60.6
CAN.G479.45 Capsicum annuum HOM05D003161 ORTHO05D005173 1.2e-200 703.7 571 62.3
Sc19g0006250 Simmondsia chinensis HOM05D003161 ORTHO05D005173 2.1e-200 703.0 570 61.8
Ah.15g091410 Amaranthus hybridus HOM05D003161 ORTHO05D005173 2.0e-198 696.4 600 59.7
THA.LOC104826779 Tarenaya hassleriana HOM05D003161 ORTHO05D005173 2.8e-197 692.6 598 59.9
QL07p025506 Quercus lobata HOM05D003161 ORTHO05D005173 4.8e-197 691.8 649 58.2
Cc06_g23250 Coffea canephora HOM05D003161 ORTHO05D005173 2.4e-196 689.5 624 58.5
Oeu046733.1 Olea europaea HOM05D003161 ORTHO05D005173 3.1e-196 689.1 635 57.2
FAN09G2861 Fragaria x ananassa HOM05D003161 ORTHO05D005173 4.1e-196 688.7 595 60.3
Gohir.D09G126300 Gossypium hirsutum HOM05D003161 ORTHO05D005173 7.0e-196 688.0 609 59.6
Gorai.006G145100 Gossypium raimondii HOM05D003161 ORTHO05D005173 1.2e-195 687.2 609 59.8
ECA238G1915 Erigeron canadensis HOM05D003161 ORTHO05D005173 1.6e-195 686.8 612 59.3
Gohir.A09G130300 Gossypium hirsutum HOM05D003161 ORTHO05D005173 1.6e-195 686.8 604 59.8
PSO339G0479 Papaver somniferum HOM05D003161 ORTHO05D005173 2.6e-195 686.0 565 61.6
DCAR_016871 Daucus carota HOM05D003161 ORTHO05D005173 7.7e-195 684.5 613 58.1
AUR62026957 Chenopodium quinoa HOM05D003161 ORTHO05D005173 3.8e-194 682.2 596 59.1
Solyc03g051900.4 Solanum lycopersicum HOM05D003161 ORTHO05D005173 8.5e-194 681.0 665 55.5
MELO3C008994.2 Cucumis melo HOM05D003161 ORTHO05D005173 1.1e-193 680.6 604 58.4
FAN05G2723 Fragaria x ananassa HOM05D003161 ORTHO05D005173 1.1e-193 680.6 590 61.0
FAN14G4107 Fragaria x ananassa HOM05D003161 ORTHO05D005173 2.5e-193 679.5 590 60.7
Migut.K00013 Erythranthe guttata HOM05D003161 ORTHO05D005173 9.4e-193 677.6 610 58.4
PSO384G1659 Papaver somniferum HOM05D003161 ORTHO05D005173 3.6e-192 675.6 606 58.9
SalBow1G2678 Salvia bowleyana HOM05D003161 ORTHO05D005173 4.7e-192 675.2 597 58.6
Lj2C361G9 Lonicera japonica HOM05D003161 ORTHO05D005173 6.1e-192 674.9 609 59.4
Ciclev10013867m.g Citrus clementina HOM05D003161 ORTHO05D005173 1.0e-191 674.1 599 58.8
Atru.chr8.1220 Acer truncatum HOM05D003161 ORTHO05D005173 1.8e-191 673.3 619 59.5
MSTRG.26730 Avicennia marina HOM05D003161 ORTHO05D005173 2.3e-191 672.9 570 61.2
CsaV3_4G031200 Cucumis sativus L. HOM05D003161 ORTHO05D005173 2.3e-191 672.9 604 58.3
CiPaw.08G134900 Carya illinoinensis HOM05D003161 ORTHO05D005173 8.8e-191 671.0 604 58.8
COL.COLO4_29434 Corchorus olitorius HOM05D003161 ORTHO05D005173 9.7e-190 667.5 617 57.1
ATR0737G016 Amborella trichopoda HOM05D003161 ORTHO05D005173 8.2e-189 664.5 613 57.3
Sed0016761 Sechium edule HOM05D003161 ORTHO05D005173 8.2e-189 664.5 602 57.1
Glyma.02G168900 Glycine max HOM05D003161 ORTHO05D005173 1.8e-188 663.3 614 56.7
Hund19220 Selenicereus undatus HOM05D003161 ORTHO05D005173 3.1e-188 662.5 692 52.5
CARHR086520 Cardamine hirsuta HOM05D003161 ORTHO05D005173 4.1e-188 662.1 611 56.1
Aa31sc238G10 Aethionema arabicum HOM05D003161 ORTHO05D005173 1.7e-186 656.8 614 56.0
Lsat_1_v5_gn_2_58000 Lactuca sativa HOM05D003161 ORTHO05D005173 2.2e-186 656.4 614 56.7
Lalb_Chr21g0316111 Lupinus albus HOM05D003161 ORTHO05D005173 2.9e-186 656.0 609 55.3
Phvul.007G270000 Phaseolus vulgaris HOM05D003161 ORTHO05D005173 5.0e-186 655.2 614 55.2
SGA_v2.0_scaffold274G46506 Striga asiatica HOM05D003161 ORTHO05D005173 1.5e-185 653.7 627 56.1
VMungo0720G1738 Vigna mungo HOM05D003161 ORTHO05D005173 7.2e-185 651.4 616 54.5
Medtr1g054710 Medicago truncatula HOM05D003161 ORTHO05D005173 1.6e-184 650.2 598 55.4
Haze_20072 Corylus avellana HOM05D003161 ORTHO05D005173 2.1e-184 649.8 592 58.1
HanXRQChr14g0457761 Helianthus annuus HOM05D003161 ORTHO05D005173 2.7e-184 649.4 554 61.4
AT3G11964 Arabidopsis thaliana HOM05D003161 ORTHO05D005173 8.0e-184 647.9 605 55.9
Psat6g109960 Pisum sativum HOM05D003161 ORTHO05D005173 1.4e-183 647.1 603 55.1
Glyma.09G104000 Glycine max HOM05D003161 ORTHO05D005173 4.0e-183 645.6 615 55.4
Thhalv10019877m.g Eutrema salsugineum HOM05D003161 ORTHO05D005173 8.8e-183 644.4 583 57.1
AL3G23570 Arabidopsis lyrata HOM05D003161 ORTHO05D005173 1.2e-182 644.0 603 55.7
C05p55950 Brassica napus HOM05D003161 ORTHO05D005173 1.2e-182 644.0 607 55.8
BolC5t34262H Brassica oleracea HOM05D003161 ORTHO05D005173 1.2e-182 644.0 607 55.8
Sp3g10190 Schrenkiella parvula HOM05D003161 ORTHO05D005173 1.2e-182 644.0 601 56.9
TPR.G14502 Trifolium pratense HOM05D003161 ORTHO05D005173 1.2e-182 644.0 602 55.1
Carub.0003s1130 Capsella rubella HOM05D003161 ORTHO05D005173 2.0e-182 643.3 605 55.5
Dinv25021 Davidia involucrata HOM05D003161 ORTHO05D005173 3.4e-182 642.5 557 61.0
EL10Ac7g16694 Beta vulgaris HOM05D003161 ORTHO05D005173 9.8e-182 641.0 595 57.0
BcaB04g21101 Brassica carinata HOM05D003161 ORTHO05D005173 2.2e-181 639.8 604 55.1
Ca_25942_v3 Cicer arietinum L. HOM05D003161 ORTHO05D005173 2.2e-181 639.8 615 54.6
BraA05t22538Z Brassica rapa HOM05D003161 ORTHO05D005173 4.8e-181 638.6 607 55.5
A05p37390 Brassica napus HOM05D003161 ORTHO05D005173 6.3e-181 638.3 607 55.4
CSS0010787 Camellia sinensis var. sinensis HOM05D003161 ORTHO05D005173 6.3e-181 638.3 621 54.9
Lj5g0006535 Lotus japonicus HOM05D003161 ORTHO05D005173 1.3e-178 630.6 609 54.2
FAN02G0008 Fragaria x ananassa HOM05D003161 ORTHO05D005173 1.7e-178 630.2 558 59.9
arahy.Tifrunner.gnm1.ann1.S31791 Arachis hypogaea HOM05D003161 ORTHO05D005173 2.5e-177 626.3 610 53.4
Cfa020115 Carpinus fangiana HOM05D003161 ORTHO05D005173 2.5e-177 626.3 592 56.6
AUR62041562 Chenopodium quinoa HOM05D003161 ORTHO05D005173 2.5e-177 626.3 592 55.2
arahy.Tifrunner.gnm1.ann1.PL5CUR Arachis hypogaea HOM05D003161 ORTHO05D005173 2.8e-176 622.9 610 53.3
BraA01t04149Z Brassica rapa HOM05D003161 ORTHO05D005173 2.8e-176 622.9 647 52.6
BolC1t05277H Brassica oleracea HOM05D003161 ORTHO05D005173 1.0e-175 620.9 647 52.6
Rhsim04G0093500 Rhododendron simsii HOM05D003161 ORTHO05D005173 4.9e-173 612.1 484 63.4
Peaxi162Scf00045g00223 Petunia axillaris HOM05D003161 ORTHO05D005173 4.9e-165 585.5 607 53.2
CSS0043330 Camellia sinensis var. sinensis HOM05D003161 ORTHO05D005173 7.0e-164 581.6 629 52.5
BcaC09g48184 Brassica carinata HOM05D003161 ORTHO05D005173 2.7e-163 579.7 487 60.2
HPP92_015879 Vanilla planifolia HOM05D003161 ORTHO05D005173 4.6e-163 578.9 485 60.2
Zm00001eb302830 Zea mays HOM05D003161 ORTHO05D005173 9.2e-148 528.1 440 60.9
HPP92_027317 Vanilla planifolia HOM05D003161 ORTHO05D005173 1.6e-144 517.3 429 60.8
Nitab4.5_0001364g0070 Nicotiana tabacum HOM05D003161 ORTHO05D005173 7.6e-142 508.4 389 65.3
Pp3c4_30330 Physcomitrium patens HOM05D003161 ORTHO05D005173 3.6e-128 463.0 595 44.2
Mapoly0019s0051 Marchantia polymorpha HOM05D003161 ORTHO05D005173 3.2e-124 449.9 652 40.0
unitig_744.g24086 Utricularia gibba HOM05D003161 ORTHO05D005173 2.1e-123 447.2 464 51.7
MD14G1050300 Malus domestica HOM05D003161 ORTHO05D005173 8.2e-112 408.7 443 51.5
vmacro22129 Vaccinium macrocarpon HOM05D003161 ORTHO05D015567 8.4e-109 398.7 397 54.9
vmacro22127 Vaccinium macrocarpon HOM05D003161 ORTHO05D005173 7.1e-108 395.6 400 52.8
SEGI_22431 Sequoiadendron giganteum HOM05D003161 ORTHO05D005173 3.3e-105 386.7 306 57.2
AagrBONN_evm.TU.Sc2ySwM_340.243 Anthoceros agrestis HOM05D003161 ORTHO05D005173 4.8e-104 382.9 585 38.5
Hund19218 Selenicereus undatus HOM05D003161 ORTHO05D005173 5.3e-103 379.4 542 42.4
BcaC05g29306 Brassica carinata HOM05D003161 ORTHO05D005173 8.8e-98 362.1 258 65.1
CBR_g22381 Chara braunii HOM05D003161 ORTHO05D005173 1.8e-95 354.4 627 34.3
SEGI_32968 Sequoiadendron giganteum HOM05D003161 ORTHO05D005173 5.5e-92 342.8 373 47.5
SMO137G0021 Selaginella moellendorffii HOM05D003161 ORTHO05D005173 3.7e-80 303.5 479 37.2
Psat7g030280 Pisum sativum HOM05D003161 ORTHO05D005173 1.8e-74 284.6 270 54.4
Cre10.g428750 Chlamydomonas reinhardtii HOM05D003161 ORTHO05D005173 4.8e-72 276.6 627 32.7
Cpa.g.sc85.20 Carica papaya HOM05D003161 ORTHO05D005173 4.0e-66 256.9 188 67.0
SEGI_29966 Sequoiadendron giganteum HOM05D003161 ORTHO05D015567 8.6e-53 212.6 286 45.1
PRCOL_00005658 Prasinoderma coloniale HOM05D003161 ORTHO05D005173 1.2e-46 192.2 512 27.7
Nitab4.5_0000571g0080 Nicotiana tabacum HOM05D003161 ORTHO05D015567 1.5e-44 185.3 228 48.2
vmacro22130 Vaccinium macrocarpon HOM05D003161 ORTHO05D037274 7.3e-44 183.0 122 72.1
Nitab4.5_0001364g0080 Nicotiana tabacum HOM05D003161 ORTHO05D015567 9.5e-44 182.6 227 47.6
CAN.G1433.26 Capsicum annuum HOM05D003161 ORTHO05D015567 4.9e-40 170.2 188 50.5
PSO384G3517 Papaver somniferum HOM05D003161 ORTHO05D005173 1.4e-39 168.7 473 30.7
Hund18985 Selenicereus undatus HOM05D003161 ORTHO05D015567 2.1e-27 128.3 136 51.5
Aa31LG3G5540 Aethionema arabicum HOM05D003161 ORTHO05D005173 4.0e-26 124.0 73 76.7
Hund30424 Selenicereus undatus HOM05D003161 ORTHO05D015567 5.2e-26 123.6 115 56.5
SHI30031 Sapria himalayana HOM05D003161 ORTHO05D005173 4.4e-25 120.6 193 38.3
TWI74G1605 Tripterygium wilfordii HOM05D003161 ORTHO05D005173 9.3e-23 112.8 99 56.6
TWI74G0321 Tripterygium wilfordii HOM05D003161 ORTHO05D005173 2.3e-21 108.2 138 44.9
Cpa.g.sc85.24 Carica papaya HOM05D003161 ORTHO05D015567 4.8e-19 100.5 108 52.8
SHI30032 Sapria himalayana HOM05D003161 ORTHO05D015567 2.4e-18 98.2 100 52.0
Cpa.g.sc85.25 Carica papaya HOM05D003161 ORTHO05D119738 1.5e-17 95.5 122 50.8
PSO170G5032 Papaver somniferum HOM05D003161 ORTHO05D037274 7.6e-17 93.2 161 37.3
PSO729G0038 Papaver somniferum HOM05D003161 ORTHO05D037274 4.2e-15 87.4 75 54.7
Nitab4.5_0000571g0110 Nicotiana tabacum HOM05D003161 ORTHO05D005173 5.1e-13 80.5 54 64.8
CAN.G1433.27 Capsicum annuum HOM05D003161 ORTHO05D005173 8.7e-13 79.7 67 59.7
Dinv25019 Davidia involucrata HOM05D003161 ORTHO05D015567 8.4e-08 63.2 77 42.9
HPP92_027316 Vanilla planifolia HOM05D003161 ORTHO05D432368 1.9e-07 62.0 127 38.6
Cfa023914 Carpinus fangiana HOM05D003161 ORTHO05D005173 9.3e-07 59.7 211 24.6
Aqoxy2G00460 Aquilegia oxysepala HOM05D005887 ORTHO05D007694 7.9e-06 56.6 37 67.6


User provided reference genes

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