Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g30901 Chara braunii HOM05D001072 ORTHO05D006807 0.0e+00 3844.7 1984 100.0
Mapoly0076s0060 Marchantia polymorpha HOM05D001072 ORTHO05D006807 3.0e-91 342.0 1419 25.9
SEGI_04376 Sequoiadendron giganteum HOM05D001072 ORTHO05D006807 4.8e-65 255.0 935 27.4
TWI31G1315 Tripterygium wilfordii HOM05D001072 ORTHO05D006807 2.8e-57 229.2 1407 21.7
Haze_24430 Corylus avellana HOM05D001072 ORTHO05D006807 5.3e-56 224.9 1421 21.5
Manes.18G136800 Manihot esculenta HOM05D001072 ORTHO05D006807 5.0e-54 218.4 1416 22.3
AagrBONN_evm.TU.Sc2ySwM_344.918 Anthoceros agrestis HOM05D001072 ORTHO05D006807 3.2e-53 215.7 590 27.5
PSO017G5353 Papaver somniferum HOM05D001072 ORTHO05D006807 4.3e-50 205.3 389 32.4
SMO367G0609 Selaginella moellendorffii HOM05D001072 ORTHO05D006807 7.4e-50 204.5 382 33.5
Aqoxy4G02167 Aquilegia oxysepala HOM05D001072 ORTHO05D006807 4.8e-49 201.8 396 33.8
ATR0681G329 Amborella trichopoda HOM05D001072 ORTHO05D006807 6.3e-49 201.4 388 32.7
CBR_g37361 Chara braunii HOM05D001072 ORTHO05D006807 8.2e-49 201.1 178 63.5
QL01p025823 Quercus lobata HOM05D001072 ORTHO05D006807 1.4e-48 200.3 412 32.8
PSO170G6524 Papaver somniferum HOM05D001072 ORTHO05D006807 1.8e-48 199.9 361 32.7
AUR62025311 Chenopodium quinoa HOM05D001072 ORTHO05D006807 6.9e-48 198.0 386 33.9
Thecc.09G359500 Theobroma cacao HOM05D001072 ORTHO05D006807 1.5e-47 196.8 370 32.2
Prupe.6G045900 Prunus persica HOM05D001072 ORTHO05D006807 2.0e-47 196.4 878 24.0
TAR623G0321 Trochodendron aralioides HOM05D001072 ORTHO05D006807 3.4e-47 195.7 361 33.2
TAR623G1063 Trochodendron aralioides HOM05D001072 ORTHO05D006807 3.4e-47 195.7 361 33.2
LjContig00141g0020287 Lotus japonicus HOM05D001072 ORTHO05D006807 3.8e-46 192.2 389 31.1
ClCG03G000170 Citrullus lanatus HOM05D001072 ORTHO05D006807 6.5e-46 191.4 368 33.2
FAN16G0450 Fragaria x ananassa HOM05D001072 ORTHO05D006807 6.5e-46 191.4 402 31.1
Glyma.02G232900 Glycine max HOM05D001072 ORTHO05D006807 6.5e-46 191.4 387 31.0
ECA236G3191 Erigeron canadensis HOM05D001072 ORTHO05D006807 8.5e-46 191.0 361 32.4
FvH4_3g39950 Fragaria vesca HOM05D001072 ORTHO05D006807 8.5e-46 191.0 402 31.1
RcHm_v2.0_Chr5g0071961 Rosa chinensis HOM05D001072 ORTHO05D006807 8.5e-46 191.0 406 31.5
AUR62028316 Chenopodium quinoa HOM05D001072 ORTHO05D006807 1.4e-45 190.3 388 34.0
FAN11G0037 Fragaria x ananassa HOM05D001072 ORTHO05D006807 1.4e-45 190.3 400 31.2
FAN25G0381 Fragaria x ananassa HOM05D001072 ORTHO05D006807 1.4e-45 190.3 402 31.1
Duzib168G2177 Durio zibethinus HOM05D001072 ORTHO05D006807 2.5e-45 189.5 372 32.0
CANSAT54G0981 Cannabis sativa HOM05D001072 ORTHO05D006807 3.2e-45 189.1 366 31.7
Pp3c11_1040 Physcomitrium patens HOM05D001072 ORTHO05D006807 3.2e-45 189.1 391 33.5
EL10Ac8g18974 Beta vulgaris HOM05D001072 ORTHO05D006807 4.2e-45 188.7 668 26.9
Ca_05680_v3 Cicer arietinum L. HOM05D001072 ORTHO05D006807 4.2e-45 188.7 385 30.9
MELO3C020494.2 Cucumis melo HOM05D001072 ORTHO05D006807 7.2e-45 188.0 368 32.9
CsaV3_1G036730 Cucumis sativus L. HOM05D001072 ORTHO05D006807 7.2e-45 188.0 368 32.3
Gohir.A03G024800 Gossypium hirsutum HOM05D001072 ORTHO05D006807 7.2e-45 188.0 372 31.5
CSS0014731 Camellia sinensis var. sinensis HOM05D001072 ORTHO05D006807 1.2e-44 187.2 409 30.3
CSS0035690 Camellia sinensis var. sinensis HOM05D001072 ORTHO05D006807 1.6e-44 186.8 392 30.6
Atru.chr1.2576 Acer truncatum HOM05D001072 ORTHO05D006807 2.1e-44 186.4 397 31.7
PGR119G0697 Punica granatum HOM05D001072 ORTHO05D006807 2.1e-44 186.4 361 31.9
Rhsim13G0062700 Rhododendron simsii HOM05D001072 ORTHO05D006807 2.7e-44 186.0 362 31.5
HanXRQChr10g0312111 Helianthus annuus HOM05D001072 ORTHO05D006807 3.6e-44 185.7 361 32.4
Gohir.D03G143700 Gossypium hirsutum HOM05D001072 ORTHO05D006807 4.7e-44 185.3 372 31.2
Phvul.008G250900 Phaseolus vulgaris HOM05D001072 ORTHO05D006807 4.7e-44 185.3 387 31.3
Psat2g054080 Pisum sativum HOM05D001072 ORTHO05D006807 4.7e-44 185.3 387 31.3
CiPaw.13G067600 Carya illinoinensis HOM05D001072 ORTHO05D006807 6.1e-44 184.9 407 30.2
Sed0011357 Sechium edule HOM05D001072 ORTHO05D006807 6.1e-44 184.9 368 31.5
Lalb_Chr04g0251881 Lupinus albus HOM05D001072 ORTHO05D006807 1.0e-43 184.1 392 29.8
Lsat_1_v5_gn_8_108741 Lactuca sativa HOM05D001072 ORTHO05D006807 1.4e-43 183.7 361 31.3
MD03G1058100 Malus domestica HOM05D001072 ORTHO05D006807 1.8e-43 183.3 589 26.8
TPR.G25340 Trifolium pratense HOM05D001072 ORTHO05D006807 3.0e-43 182.6 397 30.2
Hund08884 Selenicereus undatus HOM05D001072 ORTHO05D006807 3.9e-43 182.2 374 32.9
Medtr5g074510 Medicago truncatula HOM05D001072 ORTHO05D006807 5.1e-43 181.8 384 30.2
COL.COLO4_11172 Corchorus olitorius HOM05D001072 ORTHO05D006807 6.7e-43 181.4 388 30.4
VMungo0647G0153 Vigna mungo HOM05D001072 ORTHO05D006807 6.7e-43 181.4 394 30.5
Oeu050029.1 Olea europaea HOM05D001072 ORTHO05D006807 8.8e-43 181.0 407 29.7
Sc06g0008120 Simmondsia chinensis HOM05D001072 ORTHO05D006807 2.0e-42 179.9 389 31.9
Zm00001eb093280 Zea mays HOM05D001072 ORTHO05D006807 2.0e-42 179.9 386 30.1
Nn2g11057 Nelumbo nucifera HOM05D001072 ORTHO05D006807 2.6e-42 179.5 360 30.6
PGSC0003DMG401017675 Solanum tuberosum HOM05D001072 ORTHO05D006807 7.4e-42 177.9 361 30.7
Lj2A1095G44 Lonicera japonica HOM05D001072 ORTHO05D006807 3.7e-41 175.6 355 33.5
Actinidia32600 Actinidia chinensis HOM05D001072 ORTHO05D006807 4.8e-41 175.3 363 30.6
CDE04G3416 Ceratophyllum demersum HOM05D001072 ORTHO05D006807 6.3e-41 174.9 363 30.9
Cc01_g15000 Coffea canephora HOM05D001072 ORTHO05D006807 6.3e-41 174.9 378 31.0
MBI03_g13043_MAGBIO Magnolia biondii HOM05D001072 ORTHO05D006807 8.2e-41 174.5 361 30.7
Sopen09g017350 Solanum pennellii HOM05D001072 ORTHO05D006807 8.2e-41 174.5 361 30.5
Solyc09g055260.4 Solanum lycopersicum HOM05D001072 ORTHO05D006807 1.4e-40 173.7 361 30.2
arahy.Tifrunner.gnm1.ann1.QD7CJP Arachis hypogaea HOM05D001072 ORTHO05D006807 7.0e-40 171.4 390 29.0
arahy.Tifrunner.gnm1.ann1.XX59BG Arachis hypogaea HOM05D001072 ORTHO05D006807 7.0e-40 171.4 390 29.0
A10p15850 Brassica napus HOM05D001072 ORTHO05D006807 9.1e-40 171.0 360 32.5
BcaC04g19869 Brassica carinata HOM05D001072 ORTHO05D006807 1.2e-39 170.6 360 32.5
C09p50300 Brassica napus HOM05D001072 ORTHO05D006807 3.5e-39 169.1 357 32.8
BolC9t57885H Brassica oleracea HOM05D001072 ORTHO05D006807 4.5e-39 168.7 350 33.4
BraA10t43640Z Brassica rapa HOM05D001072 ORTHO05D006807 5.9e-39 168.3 350 33.1
Migut.D00839 Erythranthe guttata HOM05D001072 ORTHO05D006807 5.9e-39 168.3 403 27.8
BcaB08g36177 Brassica carinata HOM05D001072 ORTHO05D006807 2.2e-38 166.4 390 31.0
MSTRG.21246 Avicennia marina HOM05D001072 ORTHO05D006807 2.9e-38 166.0 411 28.5
Os01g0977600 Oryza sativa ssp. japonica HOM05D001072 ORTHO05D006807 3.8e-38 165.6 374 30.2
Carub.0008s1900 Capsella rubella HOM05D001072 ORTHO05D006807 1.1e-37 164.1 361 31.0
Ciclev10000015m.g Citrus clementina HOM05D001072 ORTHO05D006807 1.1e-37 164.1 336 32.1
AL8G34570 Arabidopsis lyrata HOM05D001072 ORTHO05D006807 1.5e-37 163.7 391 30.4
THA.LOC104810689 Tarenaya hassleriana HOM05D001072 ORTHO05D006807 2.5e-37 162.9 360 31.1
Sp6g20090 Schrenkiella parvula HOM05D001072 ORTHO05D006807 4.2e-37 162.2 361 31.9
Gorai.003G151000 Gossypium raimondii HOM05D001072 ORTHO05D006807 5.5e-37 161.8 370 28.6
Peaxi162Scf00055g00202 Petunia axillaris HOM05D001072 ORTHO05D006807 9.4e-37 161.0 333 30.0
Thhalv10012416m.g Eutrema salsugineum HOM05D001072 ORTHO05D006807 2.1e-36 159.8 360 30.8
AT5G58410 Arabidopsis thaliana HOM05D001072 ORTHO05D006807 4.7e-36 158.7 360 29.7
CARHR272240 Cardamine hirsuta HOM05D001072 ORTHO05D006807 4.7e-36 158.7 361 31.0
A03p12250 Brassica napus HOM05D001072 ORTHO05D006807 1.4e-35 157.1 388 29.6
Cpa.g.sc2.338 Carica papaya HOM05D001072 ORTHO05D006807 5.2e-35 155.2 210 38.1
FAN21G1089 Fragaria x ananassa HOM05D001072 ORTHO05D006807 8.8e-35 154.5 389 29.0
Nitab4.5_0000684g0150 Nicotiana tabacum HOM05D001072 ORTHO05D006807 2.0e-34 153.3 335 31.0
C03p14380 Brassica napus HOM05D001072 ORTHO05D006807 2.6e-34 152.9 332 31.0
BraA03t10536Z Brassica rapa HOM05D001072 ORTHO05D006807 5.7e-34 151.8 322 31.4
BolC3t13881H Brassica oleracea HOM05D001072 ORTHO05D006807 2.8e-33 149.4 322 31.7
Sabra19G0124000 Salix brachista HOM05D001072 ORTHO05D006807 4.5e-31 142.1 360 30.0
Sabra19G0130600 Salix brachista HOM05D001072 ORTHO05D006807 4.5e-31 142.1 360 30.0
Potri.019G126000 Populus trichocarpa HOM05D001072 ORTHO05D006807 5.9e-31 141.7 361 30.2
SGA_v2.0_scaffold20G09297 Striga asiatica HOM05D001072 ORTHO05D006807 7.7e-31 141.4 400 27.0
BcaB01g04524 Brassica carinata HOM05D001072 ORTHO05D006807 1.3e-30 140.6 304 30.3
Aa31LG11G200 Aethionema arabicum HOM05D001072 ORTHO05D006807 8.5e-30 137.9 220 35.5
Dinv12247 Davidia involucrata HOM05D001072 ORTHO05D006807 1.1e-29 137.5 171 45.0
DCAR_018643 Daucus carota HOM05D001072 ORTHO05D006807 2.1e-28 133.3 172 43.0
Dinv12246 Davidia involucrata HOM05D001072 ORTHO05D006807 2.3e-27 129.8 168 38.1
vmacro02906 Vaccinium macrocarpon HOM05D001072 ORTHO05D006807 2.6e-26 126.3 179 39.1
Oeu050026.1 Olea europaea HOM05D001072 ORTHO05D006807 1.4e-24 120.6 267 27.0
CBR_g28846 Chara braunii HOM05D000019 ORTHO05D000048 5.4e-24 118.6 58 96.6
HPP92_012011 Vanilla planifolia HOM05D001072 ORTHO05D006807 1.0e-22 114.4 167 40.1
CBR_g53950 Chara braunii HOM05D003842 ORTHO05D004436 1.7e-22 113.6 55 98.2
CBR_g40285 Chara braunii HOM05D000019 ORTHO05D000002 5.0e-22 112.1 59 93.2
HPP92_011994 Vanilla planifolia HOM05D001072 ORTHO05D006807 5.0e-22 112.1 167 39.5
CBR_g45273 Chara braunii HOM05D001072 ORTHO05D006807 1.9e-21 110.2 59 91.5
Cre06.g252100 Chlamydomonas reinhardtii HOM05D001072 ORTHO05D006807 1.2e-20 107.5 347 29.4
Psat4g121040 Pisum sativum HOM05D001072 ORTHO05D006807 3.4e-18 99.4 89 51.7
CBR_g27922 Chara braunii HOM05D000019 ORTHO05D000048 4.9e-17 95.5 48 93.8
Psat0s2465g0160 Pisum sativum HOM05D001072 ORTHO05D006807 8.3e-17 94.7 95 46.3
Eucgr.J01850 Eucalyptus grandis HOM05D001072 ORTHO05D006807 5.4e-16 92.0 177 29.9
PRCOL_00002801 Prasinoderma coloniale HOM05D001072 ORTHO05D006807 1.3e-14 87.4 103 41.7
Nitab4.5_0000046g0010 Nicotiana tabacum HOM05D001072 ORTHO05D006807 2.9e-14 86.3 137 38.7
CBR_g22306 Chara braunii HOM05D007859 ORTHO05D009320 3.8e-14 85.9 78 60.3
MBI03_g13045_MAGBIO Magnolia biondii HOM05D001072 ORTHO05D006807 3.3e-13 82.8 140 40.0
CBR_g54170 Chara braunii HOM05D007859 ORTHO05D009320 1.2e-12 80.9 77 57.1
CBR_g26252 Chara braunii HOM05D007859 ORTHO05D009320 8.0e-12 78.2 78 55.1
CBR_g54111 Chara braunii HOM05D007859 ORTHO05D009320 1.8e-11 77.0 78 53.8
CBR_g37588 Chara braunii HOM05D008350 ORTHO05D006807 2.3e-11 76.6 90 42.2
CBR_g37950 Chara braunii HOM05D000019 ORTHO05D000002 3.0e-11 76.3 78 56.4
CBR_g18657 Chara braunii HOM05D007859 ORTHO05D009320 4.0e-11 75.9 78 57.7
CBR_g55302 Chara braunii HOM05D007859 ORTHO05D009320 4.0e-11 75.9 78 52.6
CBR_g6346 Chara braunii HOM05D000019 ORTHO05D000048 4.0e-11 75.9 78 56.4
CBR_g38074 Chara braunii HOM05D007859 ORTHO05D002787 5.2e-11 75.5 112 43.8
CBR_g40170 Chara braunii HOM05D007859 ORTHO05D009320 2.0e-10 73.6 128 38.3
Dinv12245 Davidia involucrata HOM05D001072 ORTHO05D006807 2.6e-10 73.2 205 28.3
CBR_g17167 Chara braunii HOM05D007859 ORTHO05D009320 4.4e-10 72.4 81 50.6
CBR_g766 Chara braunii HOM05D000189 ORTHO05D004078 4.4e-10 72.4 78 50.0
CBR_g38717 Chara braunii HOM05D000121 ORTHO05D009320 9.8e-10 71.2 78 51.3
Dinv09685 Davidia involucrata HOM05D001072 ORTHO05D006807 1.3e-09 70.9 205 27.8
CBR_g8553 Chara braunii HOM05D000019 ORTHO05D000002 2.2e-09 70.1 135 35.6
QL04p095953 Quercus lobata HOM05D001072 ORTHO05D006807 2.2e-09 70.1 193 28.0
CBR_g9061 Chara braunii HOM05D008350 ORTHO05D010575 2.9e-09 69.7 90 41.1
CBR_g38852 Chara braunii HOM05D000019 ORTHO05D000002 4.9e-09 68.9 84 51.2
CBR_g24387 Chara braunii HOM05D007859 ORTHO05D009320 1.1e-08 67.8 77 50.6
CBR_g19315 Chara braunii HOM05D007859 ORTHO05D009320 1.8e-08 67.0 79 51.9
CBR_g18655 Chara braunii HOM05D007859 ORTHO05D009320 4.1e-08 65.9 78 52.6
CBR_g48868 Chara braunii HOM05D007859 ORTHO05D009320 4.1e-08 65.9 78 51.3
CBR_g26237 Chara braunii HOM05D007859 ORTHO05D009320 7.0e-08 65.1 77 50.6
CBR_g10783 Chara braunii HOM05D007859 ORTHO05D009320 1.2e-07 64.3 78 50.0
MCO05G029 Micromonas commoda HOM05D001072 ORTHO05D006807 1.6e-07 63.9 98 34.7
Psat3g023200 Pisum sativum HOM05D001072 ORTHO05D006807 1.6e-07 63.9 71 43.7
CBR_g32505 Chara braunii HOM05D007859 ORTHO05D009320 3.5e-07 62.8 78 46.2
PGSC0003DMG402017675 Solanum tuberosum HOM05D001072 ORTHO05D006807 3.5e-07 62.8 202 27.7
CBR_g34902 Chara braunii HOM05D000004 ORTHO05D000002 5.9e-07 62.0 82 41.5
unitig_0.g202 Utricularia gibba HOM05D001072 ORTHO05D006807 5.9e-07 62.0 76 39.5
CBR_g70450 Chara braunii HOM05D007859 ORTHO05D009320 1.0e-06 61.2 77 46.8
unitig_0.g201 Utricularia gibba HOM05D001072 ORTHO05D006807 2.3e-06 60.1 217 26.3
CBR_g9089 Chara braunii HOM05D000921 ORTHO05D004782 3.9e-06 59.3 78 48.7


User provided reference genes

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