Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g2917 Chara braunii HOM05D003938 ORTHO05D004759 0.0e+00 1984.5 1389 100.0
Pp3c1_5600 Physcomitrium patens HOM05D003938 ORTHO05D004759 1.6e-19 103.2 134 43.3
Mapoly0010s0175 Marchantia polymorpha HOM05D003938 ORTHO05D004759 8.1e-19 100.9 178 43.3
AagrBONN_evm.TU.Sc2ySwM_368.1871 Anthoceros agrestis HOM05D003938 ORTHO05D004759 9.9e-17 94.0 139 39.6
Sopen07g034590 Solanum pennellii HOM05D003938 ORTHO05D004759 8.4e-16 90.9 166 39.8
PGSC0003DMG400022237 Solanum tuberosum HOM05D003938 ORTHO05D004759 1.4e-15 90.1 155 40.0
Glyma.15G213200 Glycine max HOM05D003938 ORTHO05D004759 5.4e-15 88.2 162 41.4
MD10G1204000 Malus domestica HOM05D003938 ORTHO05D004759 9.2e-15 87.4 124 40.3
Manes.06G173850 Manihot esculenta HOM05D003938 ORTHO05D004759 9.2e-15 87.4 182 33.5
Nitab4.5_0009317g0010 Nicotiana tabacum HOM05D003938 ORTHO05D004759 2.1e-14 86.3 164 37.8
VMungo1127G1443 Vigna mungo HOM05D003938 ORTHO05D004759 3.5e-14 85.5 165 41.2
SGA_v2.0_scaffold7G03579 Striga asiatica HOM05D003938 ORTHO05D004759 4.6e-14 85.1 164 37.8
CDE01G0219 Ceratophyllum demersum HOM05D003938 ORTHO05D004759 6.0e-14 84.7 151 39.7
PGR119G1566 Punica granatum HOM05D003938 ORTHO05D004759 6.0e-14 84.7 186 34.4
ClCG09G022610 Citrullus lanatus HOM05D003938 ORTHO05D004759 7.8e-14 84.3 174 37.9
CAN.G943.34 Capsicum annuum HOM05D003938 ORTHO05D004759 1.0e-13 84.0 144 42.4
Solyc07g066420.4 Solanum lycopersicum HOM05D003938 ORTHO05D004759 1.0e-13 84.0 152 38.8
Lj3g0013935 Lotus japonicus HOM05D003938 ORTHO05D004759 1.3e-13 83.6 193 36.3
GSVIVG01020281001 Vitis vinifera HOM05D003938 ORTHO05D004759 3.0e-13 82.4 140 40.0
FAN25G2080 Fragaria x ananassa HOM05D003938 ORTHO05D004759 3.9e-13 82.0 169 36.1
MELO3C012622.2 Cucumis melo HOM05D003938 ORTHO05D004759 5.1e-13 81.6 102 46.1
FvH4_3g15530 Fragaria vesca HOM05D003938 ORTHO05D004759 5.1e-13 81.6 153 36.6
Glyma.19G004200 Glycine max HOM05D003938 ORTHO05D004759 6.6e-13 81.3 154 40.9
CSS0007376 Camellia sinensis var. sinensis HOM05D003938 ORTHO05D004759 8.7e-13 80.9 165 36.4
Prupe.4G137900 Prunus persica HOM05D003938 ORTHO05D004759 8.7e-13 80.9 174 33.9
HanXRQChr05g0160881 Helianthus annuus HOM05D003938 ORTHO05D004759 1.1e-12 80.5 167 35.3
RcHm_v2.0_Chr5g0026161 Rosa chinensis HOM05D003938 ORTHO05D004759 1.1e-12 80.5 166 37.3
Sed0018665 Sechium edule HOM05D003938 ORTHO05D004759 1.1e-12 80.5 174 35.6
AT1G53720 Arabidopsis thaliana HOM05D003938 ORTHO05D004759 1.5e-12 80.1 165 36.4
Zm00001eb274050 Zea mays HOM05D003938 ORTHO05D004759 1.5e-12 80.1 167 39.5
Lalb_Chr01g0007211 Lupinus albus HOM05D003938 ORTHO05D004759 1.9e-12 79.7 178 37.1
Dinv19621 Davidia involucrata HOM05D003938 ORTHO05D004759 3.3e-12 79.0 124 39.5
PSO675G8491 Papaver somniferum HOM05D003938 ORTHO05D004759 3.3e-12 79.0 93 48.4
arahy.Tifrunner.gnm1.ann1.KA488U Arachis hypogaea HOM05D003938 ORTHO05D004759 4.3e-12 78.6 176 34.7
CSS0016392 Camellia sinensis var. sinensis HOM05D003938 ORTHO05D004759 4.3e-12 78.6 138 37.0
CSS0024659 Camellia sinensis var. sinensis HOM05D003938 ORTHO05D004759 4.3e-12 78.6 138 37.0
MD05G1222400 Malus domestica HOM05D003938 ORTHO05D004759 4.3e-12 78.6 173 35.3
CsaV3_7G022770 Cucumis sativus L. HOM05D003938 ORTHO05D004759 5.6e-12 78.2 102 45.1
MSTRG.16112 Avicennia marina HOM05D003938 ORTHO05D004759 7.3e-12 77.8 167 37.1
CSS0000259 Camellia sinensis var. sinensis HOM05D003938 ORTHO05D004759 7.3e-12 77.8 166 33.1
FAN16G1651 Fragaria x ananassa HOM05D003938 ORTHO05D004759 7.3e-12 77.8 172 34.9
Aqoxy3G04185_Aqoxy3G04186 Aquilegia oxysepala HOM05D003938 ORTHO05D004759 9.6e-12 77.4 176 33.5
arahy.Tifrunner.gnm1.ann1.TD7I6F Arachis hypogaea HOM05D003938 ORTHO05D004759 9.6e-12 77.4 176 34.1
Carub.0001s4300 Capsella rubella HOM05D003938 ORTHO05D004759 9.6e-12 77.4 63 55.6
Medtr6g084140 Medicago truncatula HOM05D003938 ORTHO05D004759 9.6e-12 77.4 165 38.2
vmacro11660 Vaccinium macrocarpon HOM05D003938 ORTHO05D004759 9.6e-12 77.4 173 39.3
Atru.chr1.190 Acer truncatum HOM05D003938 ORTHO05D004759 1.6e-11 76.6 165 37.6
PSO675G9176 Papaver somniferum HOM05D003938 ORTHO05D004759 1.6e-11 76.6 190 35.8
Sc09g0007280 Simmondsia chinensis HOM05D003938 ORTHO05D004759 1.6e-11 76.6 169 33.1
CANSAT80G1380 Cannabis sativa HOM05D003938 ORTHO05D004759 2.1e-11 76.3 143 38.5
Phvul.011G177175 Phaseolus vulgaris HOM05D003938 ORTHO05D004759 2.8e-11 75.9 167 34.7
AL1G62420 Arabidopsis lyrata HOM05D003938 ORTHO05D004759 3.6e-11 75.5 160 34.4
Gohir.A05G003300 Gossypium hirsutum HOM05D003938 ORTHO05D004759 3.6e-11 75.5 166 36.1
Potri.005G097500 Populus trichocarpa HOM05D003938 ORTHO05D004759 3.6e-11 75.5 187 33.7
ATR0763G204 Amborella trichopoda HOM05D003938 ORTHO05D004759 4.8e-11 75.1 122 38.5
A08p00110 Brassica napus HOM05D000173 ORTHO05D008065 4.8e-11 75.1 136 37.5
BraA08t32068Z Brassica rapa HOM05D003938 ORTHO05D008065 4.8e-11 75.1 136 37.5
Sabra05G0079800 Salix brachista HOM05D003938 ORTHO05D004759 4.8e-11 75.1 178 32.6
FAN21G1947 Fragaria x ananassa HOM05D003938 ORTHO05D004759 6.2e-11 74.7 256 29.7
Thhalv10011414m.g Eutrema salsugineum HOM05D003938 ORTHO05D004759 8.1e-11 74.3 61 55.7
Gorai.009G003300 Gossypium raimondii HOM05D003938 ORTHO05D004759 8.1e-11 74.3 166 36.1
Nn7g37935 Nelumbo nucifera HOM05D003938 ORTHO05D004759 8.1e-11 74.3 132 39.4
PSO717G0129 Papaver somniferum HOM05D003938 ORTHO05D004759 8.1e-11 74.3 153 35.9
AUR62037621 Chenopodium quinoa HOM05D003938 ORTHO05D004759 1.8e-10 73.2 173 36.4
Psat4g174120 Pisum sativum HOM05D003938 ORTHO05D004759 1.8e-10 73.2 111 41.4
Ciclev10004604m.g Citrus clementina HOM05D003938 ORTHO05D004759 2.4e-10 72.8 167 35.9
AUR62040863 Chenopodium quinoa HOM05D003938 ORTHO05D004759 4.0e-10 72.0 142 36.6
TPR.G9407 Trifolium pratense HOM05D003938 ORTHO05D004759 4.0e-10 72.0 175 35.4
Nitab4.5_0001749g0120 Nicotiana tabacum HOM05D003938 ORTHO05D004759 5.3e-10 71.6 317 27.4
Ca_12645_v3 Cicer arietinum L. HOM05D003938 ORTHO05D004759 6.9e-10 71.2 61 55.7
C03p93390 Brassica napus HOM05D003938 ORTHO05D008065 9.0e-10 70.9 136 36.8
Os06g0670500 Oryza sativa ssp. japonica HOM05D003938 ORTHO05D004759 9.0e-10 70.9 151 36.4
TPR.G22448 Trifolium pratense HOM05D003938 ORTHO05D004759 9.0e-10 70.9 165 35.8
TAR626G0088 Trochodendron aralioides HOM05D003938 ORTHO05D004759 9.0e-10 70.9 148 37.2
Actinidia07348 Actinidia chinensis HOM05D003938 ORTHO05D004759 2.0e-09 69.7 173 34.7
Aa31LG10G170 Aethionema arabicum HOM05D003938 ORTHO05D004759 2.0e-09 69.7 150 34.0
Cc05_g16030 Coffea canephora HOM05D003938 ORTHO05D004759 3.4e-09 68.9 184 33.7
FAN11G2591 Fragaria x ananassa HOM05D003938 ORTHO05D004759 4.4e-09 68.6 174 31.6
unitig_26.g10081 Utricularia gibba HOM05D003938 ORTHO05D004759 4.4e-09 68.6 135 34.1
BcaB04g16924 Brassica carinata HOM05D003938 ORTHO05D004759 5.8e-09 68.2 141 35.5
BolC3t21636H Brassica oleracea HOM05D003938 ORTHO05D008065 5.8e-09 68.2 141 35.5
Peaxi162Scf00452g00848 Petunia axillaris HOM05D003938 ORTHO05D004759 7.6e-09 67.8 315 27.9
TWI74G0164 Tripterygium wilfordii HOM05D003938 ORTHO05D004759 7.6e-09 67.8 175 32.0
Lsat_1_v5_gn_7_71321 Lactuca sativa HOM05D003938 ORTHO05D004759 1.3e-08 67.0 181 30.9
HPP92_008859 Vanilla planifolia HOM05D003938 ORTHO05D004759 1.3e-08 67.0 156 37.8
ECA240G3729 Erigeron canadensis HOM05D003938 ORTHO05D004759 1.7e-08 66.6 152 33.6
Potri.007G067000 Populus trichocarpa HOM05D003938 ORTHO05D004759 1.7e-08 66.6 103 39.8
CARHR044020 Cardamine hirsuta HOM05D003938 ORTHO05D004759 2.2e-08 66.2 167 33.5
Medtr8g442420 Medicago truncatula HOM05D003938 ORTHO05D004759 3.8e-08 65.5 165 35.2
THA.LOC104822756 Tarenaya hassleriana HOM05D003938 ORTHO05D004759 3.8e-08 65.5 127 37.0
Thecc.09G180900 Theobroma cacao HOM05D003938 ORTHO05D004759 4.9e-08 65.1 166 34.3
HPP92_008853 Vanilla planifolia HOM05D003938 ORTHO05D004759 6.4e-08 64.7 181 35.4
EL10Ac2g03350 Beta vulgaris HOM05D003938 ORTHO05D004759 1.4e-07 63.5 283 26.9
CSS0019207 Camellia sinensis var. sinensis HOM05D003938 ORTHO05D004759 1.9e-07 63.2 174 29.9
Haze_07837 Corylus avellana HOM05D002071 ORTHO05D004759 7.1e-07 61.2 260 26.2
QL04p077115 Quercus lobata HOM05D003938 ORTHO05D004759 7.1e-07 61.2 179 30.2
Duzib168G1061 Durio zibethinus HOM05D003938 ORTHO05D004759 1.2e-06 60.5 169 34.9
SMO351G0536 Selaginella moellendorffii HOM05D003938 ORTHO05D004759 4.6e-06 58.5 33 75.8


User provided reference genes

Program Settings