Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g19434 Chara braunii HOM05D006139 ORTHO05D007681 0.0e+00 1216.1 627 100.0
Mapoly0113s0020 Marchantia polymorpha HOM05D006139 ORTHO05D007681 2.1e-147 526.9 634 45.6
Potri.011G107400 Populus trichocarpa HOM05D006139 ORTHO05D007681 9.9e-142 508.1 626 43.1
SMO361G0513 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 1.3e-141 507.7 569 46.9
SMO361G0769 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 1.3e-141 507.7 569 47.3
Hma1.2p1_0412F.1_g147150 Hydrangea macrophylla HOM05D006139 ORTHO05D007681 2.2e-141 506.9 627 43.1
Aqoxy2G03950 Aquilegia oxysepala HOM05D006139 ORTHO05D007681 4.9e-141 505.8 624 43.3
CSS0045945 Camellia sinensis var. sinensis HOM05D006139 ORTHO05D007681 4.9e-141 505.8 627 43.5
GSVIVG01031668001 Vitis vinifera HOM05D006139 ORTHO05D007681 1.1e-140 504.6 625 44.3
arahy.Tifrunner.gnm1.ann1.46LBLY Arachis hypogaea HOM05D006139 ORTHO05D007681 1.4e-140 504.2 636 42.5
TWI38G2388 Tripterygium wilfordii HOM05D006139 ORTHO05D007681 7.1e-140 501.9 626 45.0
RcHm_v2.0_Chr4g0409801 Rosa chinensis HOM05D006139 ORTHO05D007681 9.3e-140 501.5 630 43.2
Eucgr.F03241 Eucalyptus grandis HOM05D006139 ORTHO05D007681 1.6e-139 500.7 627 43.2
CsaV3_4G003770 Cucumis sativus L. HOM05D006139 ORTHO05D007681 4.6e-139 499.2 628 43.8
Manes.03G099000 Manihot esculenta HOM05D006139 ORTHO05D007681 6.0e-139 498.8 629 43.2
Ciclev10019318m.g Citrus clementina HOM05D006139 ORTHO05D007681 1.3e-138 497.7 628 44.1
MELO3C017678.2 Cucumis melo HOM05D006139 ORTHO05D007681 1.3e-138 497.7 628 43.2
Zm00001eb116810 Zea mays HOM05D006139 ORTHO05D007681 1.3e-138 497.7 625 43.8
CANSAT11G1108 Cannabis sativa HOM05D006139 ORTHO05D007681 5.1e-138 495.7 636 43.1
Glyma.20G248800 Glycine max HOM05D006139 ORTHO05D007681 8.7e-138 495.0 636 41.7
Medtr1g116980 Medicago truncatula HOM05D006139 ORTHO05D007681 1.1e-137 494.6 638 41.7
Psat6g243280 Pisum sativum HOM05D006139 ORTHO05D007681 1.1e-137 494.6 635 42.0
Thecc.07G123700 Theobroma cacao HOM05D006139 ORTHO05D007681 1.1e-137 494.6 627 43.4
PGR031G2404 Punica granatum HOM05D006139 ORTHO05D007681 1.5e-137 494.2 637 41.8
ECA246G3778 Erigeron canadensis HOM05D006139 ORTHO05D007681 1.9e-137 493.8 629 43.1
Lj5g0023092 Lotus japonicus HOM05D006139 ORTHO05D007681 1.9e-137 493.8 628 42.0
Nn3g20967 Nelumbo nucifera HOM05D006139 ORTHO05D007681 1.9e-137 493.8 610 43.1
Sp1g15110 Schrenkiella parvula HOM05D006139 ORTHO05D007681 1.9e-137 493.8 630 42.7
Sed0017452 Sechium edule HOM05D006139 ORTHO05D007681 1.9e-137 493.8 626 43.5
Gorai.002G052100 Gossypium raimondii HOM05D006139 ORTHO05D007681 3.3e-137 493.0 626 42.7
Thhalv10007085m.g Eutrema salsugineum HOM05D006139 ORTHO05D007681 5.6e-137 492.3 630 42.4
FAN12G2778 Fragaria x ananassa HOM05D006139 ORTHO05D007681 7.3e-137 491.9 630 42.4
Lalb_Chr06g0164661 Lupinus albus HOM05D006139 ORTHO05D007681 7.3e-137 491.9 628 41.7
FvH4_4g12150 Fragaria vesca HOM05D006139 ORTHO05D007681 1.3e-136 491.1 630 42.4
BcaB02g06659 Brassica carinata HOM05D006139 ORTHO05D007681 2.1e-136 490.3 630 42.4
Carub.0001s1670 Capsella rubella HOM05D006139 ORTHO05D007681 2.1e-136 490.3 631 42.6
AT1G16970 Arabidopsis thaliana HOM05D006139 ORTHO05D007681 2.8e-136 490.0 631 42.2
Cc03_g10570 Coffea canephora HOM05D006139 ORTHO05D007681 2.8e-136 490.0 626 41.7
MD13G1278700 Malus domestica HOM05D006139 ORTHO05D007681 2.8e-136 490.0 633 41.9
CiPaw.01G108300 Carya illinoinensis HOM05D006139 ORTHO05D007681 3.6e-136 489.6 627 41.6
Sc22g0003230 Simmondsia chinensis HOM05D006139 ORTHO05D007681 4.8e-136 489.2 621 43.3
VMungo0720G1636 Vigna mungo HOM05D006139 ORTHO05D007681 8.1e-136 488.4 632 41.8
Gohir.A01G052100 Gossypium hirsutum HOM05D006139 ORTHO05D007681 1.1e-135 488.0 626 42.7
Lsat_1_v5_gn_3_24941 Lactuca sativa HOM05D006139 ORTHO05D007681 1.8e-135 487.3 628 42.8
QL10p044141 Quercus lobata HOM05D006139 ORTHO05D007681 1.8e-135 487.3 662 40.6
Sopen09g036170 Solanum pennellii HOM05D006139 ORTHO05D007681 4.0e-135 486.1 626 42.2
BcaC05g25552 Brassica carinata HOM05D006139 ORTHO05D007681 5.3e-135 485.7 630 42.1
C05p15280 Brassica napus HOM05D006139 ORTHO05D007681 9.0e-135 485.0 630 42.1
PSO675G6876 Papaver somniferum HOM05D006139 ORTHO05D007681 9.0e-135 485.0 626 41.7
Prupe.1G178000 Prunus persica HOM05D006139 ORTHO05D007681 9.0e-135 485.0 627 41.8
Sabra11G0095200 Salix brachista HOM05D006139 ORTHO05D007681 9.0e-135 485.0 634 42.0
Solyc09g098230.3 Solanum lycopersicum HOM05D006139 ORTHO05D007681 1.5e-134 484.2 626 42.2
PSO017G2886 Papaver somniferum HOM05D006139 ORTHO05D007681 2.0e-134 483.8 628 41.9
Duzib213G0841 Durio zibethinus HOM05D006139 ORTHO05D007681 2.6e-134 483.4 626 42.2
SGA_v2.0_scaffold109G31142 Striga asiatica HOM05D006139 ORTHO05D007681 3.4e-134 483.0 631 42.2
AagrBONN_evm.TU.Sc2ySwM_228.1556 Anthoceros agrestis HOM05D006139 ORTHO05D007681 7.6e-134 481.9 620 43.1
CARHR017480 Cardamine hirsuta HOM05D006139 ORTHO05D007681 1.3e-133 481.1 630 42.2
Migut.N00440 Erythranthe guttata HOM05D006139 ORTHO05D007681 1.3e-133 481.1 626 41.9
A06p12870 Brassica napus HOM05D006139 ORTHO05D007681 1.4e-132 477.6 630 41.7
TAR365G1167 Trochodendron aralioides HOM05D006139 ORTHO05D007681 2.4e-132 476.9 604 42.4
MSTRG.17865 Avicennia marina HOM05D006139 ORTHO05D007681 1.2e-131 474.6 627 41.1
ATR0609G005 Amborella trichopoda HOM05D006139 ORTHO05D007681 1.3e-130 471.1 632 42.1
Phvul.007G001600 Phaseolus vulgaris HOM05D006139 ORTHO05D007681 2.5e-129 466.8 624 40.7
THA.LOC104812308 Tarenaya hassleriana HOM05D006139 ORTHO05D007681 4.0e-127 459.5 626 41.1
Rhsim07G0086500 Rhododendron simsii HOM05D006139 ORTHO05D007681 8.4e-125 451.8 718 37.0
BolC5t30234H Brassica oleracea HOM05D006139 ORTHO05D007681 5.5e-124 449.1 633 40.6
Pp3c18_7140 Physcomitrium patens HOM05D006139 ORTHO05D007681 7.1e-124 448.7 619 44.4
Gohir.D01G041500 Gossypium hirsutum HOM05D006139 ORTHO05D007681 1.3e-122 444.5 590 41.5
BraA06t24447Z Brassica rapa HOM05D006139 ORTHO05D007681 5.1e-122 442.6 630 40.0
Hund19684 Selenicereus undatus HOM05D006139 ORTHO05D007681 6.7e-122 442.2 626 39.9
AUR62003718 Chenopodium quinoa HOM05D006139 ORTHO05D007681 2.6e-118 430.3 550 43.3
FAN07G2792 Fragaria x ananassa HOM05D006139 ORTHO05D007681 2.6e-118 430.3 641 38.7
arahy.Tifrunner.gnm1.ann1.JAL8JD Arachis hypogaea HOM05D006139 ORTHO05D007681 1.3e-117 427.9 648 38.9
FAN17G0552 Fragaria x ananassa HOM05D006139 ORTHO05D007681 1.7e-117 427.6 633 39.0
AUR62018029 Chenopodium quinoa HOM05D006139 ORTHO05D007681 8.4e-117 425.2 642 38.8
FAN12G0395 Fragaria x ananassa HOM05D006139 ORTHO05D007681 1.9e-116 424.1 642 38.9
Lj4A728T41 Lonicera japonica HOM05D006139 ORTHO05D007681 9.0e-111 405.2 589 39.2
MBI07_g00628_MAGBIO Magnolia biondii HOM05D006139 ORTHO05D007681 1.0e-109 401.7 623 38.8
Dinv44237 Davidia involucrata HOM05D006139 ORTHO05D007681 1.9e-108 397.5 490 43.7
COL.COLO4_17513 Corchorus olitorius HOM05D006139 ORTHO05D007681 2.1e-107 394.0 644 37.9
Haze_11079 Corylus avellana HOM05D006139 ORTHO05D007681 2.3e-106 390.6 592 39.7
vmacro13984 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 2.3e-106 390.6 694 35.6
HPP92_015930 Vanilla planifolia HOM05D006139 ORTHO05D007681 6.9e-103 379.0 437 47.1
CAN.G710.40 Capsicum annuum HOM05D006139 ORTHO05D007681 2.6e-102 377.1 635 36.4
Peaxi162Scf00286g00443 Petunia axillaris HOM05D006139 ORTHO05D007681 1.7e-101 374.4 589 38.0
Nitab4.5_0001526g0130 Nicotiana tabacum HOM05D006139 ORTHO05D007681 3.9e-98 363.2 628 36.0
ClCG07G016640 Citrullus lanatus HOM05D006139 ORTHO05D007681 4.1e-95 353.2 611 36.7
Nitab4.5_0001687g0050 Nicotiana tabacum HOM05D006139 ORTHO05D007681 2.7e-91 340.5 591 35.5
CDE02G2779 Ceratophyllum demersum HOM05D006139 ORTHO05D007681 1.9e-84 317.8 440 40.5
Oeu013397.2 Olea europaea HOM05D006139 ORTHO05D007681 5.7e-81 306.2 402 41.0
Atru.chr2.2053 Acer truncatum HOM05D006139 ORTHO05D007681 5.5e-76 289.7 311 48.6
TPR.G8879 Trifolium pratense HOM05D006139 ORTHO05D007681 8.3e-72 275.8 295 46.4
PGSC0003DMG400014069 Solanum tuberosum HOM05D006139 ORTHO05D007681 1.0e-69 268.9 292 47.3
Cpa.g.sc77.50 Carica papaya HOM05D006139 ORTHO05D007681 8.6e-69 265.8 296 48.0
Aa31LG7G1410 Aethionema arabicum HOM05D006139 ORTHO05D007681 3.4e-57 227.3 622 31.5
TPR.G8907 Trifolium pratense HOM05D006139 ORTHO05D007681 6.2e-51 206.5 223 47.5
SHI27652 Sapria himalayana HOM05D006139 ORTHO05D007681 1.4e-50 205.3 352 34.9
Cre13.g607500 Chlamydomonas reinhardtii HOM05D006139 ORTHO05D007681 2.6e-49 201.1 712 26.4
DCAR_005496 Daucus carota HOM05D006139 ORTHO05D007681 1.4e-47 195.3 229 44.1
TPR.G8868 Trifolium pratense HOM05D006139 ORTHO05D007681 5.4e-47 193.4 286 37.1
Atru.chr2.2052 Acer truncatum HOM05D006139 ORTHO05D007681 6.0e-46 189.9 269 39.0
SEGI_35314 Sequoiadendron giganteum HOM05D006139 ORTHO05D007681 9.5e-44 182.6 262 39.3
Cfa021664 Carpinus fangiana HOM05D006139 ORTHO05D007681 1.8e-42 178.3 507 26.8
Ca_11423_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 3.0e-37 161.0 243 38.7
MCO14G338 Micromonas commoda HOM05D006139 ORTHO05D007681 1.2e-33 149.1 661 26.0
DCAR_005495 Daucus carota HOM05D006139 ORTHO05D007681 4.9e-32 143.7 257 36.2
unitig_578.g15953 Utricularia gibba HOM05D006139 ORTHO05D007681 4.6e-30 137.1 202 34.7
Ah.03g143030 Amaranthus hybridus HOM05D006139 ORTHO05D007681 8.7e-29 132.9 180 40.6
FAN22G0061 Fragaria x ananassa HOM05D006139 ORTHO05D007681 1.1e-28 132.5 166 41.0
unitig_578.g15954 Utricularia gibba HOM05D006139 ORTHO05D004041 3.6e-27 127.5 161 42.2
Ca_11425_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 1.4e-26 125.6 130 46.2
Os07g0184900 Oryza sativa ssp. japonica HOM05D006139 ORTHO05D007681 1.9e-23 115.2 148 43.2
arahy.Tifrunner.gnm1.ann1.6RHH59 Arachis hypogaea HOM05D006139 ORTHO05D007681 2.7e-22 111.3 133 42.1
Ca_11424_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 3.6e-19 100.9 107 51.4
SEGI_31905 Sequoiadendron giganteum HOM05D006139 ORTHO05D007681 2.1e-14 85.1 72 55.6
CANSAT78G0600 Cannabis sativa HOM05D006139 ORTHO05D007681 3.9e-13 80.9 118 35.6
HanXRQChr13g0406711 Helianthus annuus HOM05D006139 ORTHO05D007681 1.0e-08 66.2 60 60.0
BolC4t22161H Brassica oleracea HOM05D006139 ORTHO05D007681 1.4e-07 62.4 71 42.3
Hund20183 Selenicereus undatus HOM05D006139 ORTHO05D007681 3.2e-07 61.2 180 28.3
AUR62043732 Chenopodium quinoa HOM05D006139 ORTHO05D007681 4.2e-07 60.8 58 44.8
vmacro12608 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 7.9e-06 56.6 45 55.6


User provided reference genes

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