Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G0600 Cannabis sativa HOM05D006139 ORTHO05D007681 5.1e-66 254.2 125 100.0
CANSAT11G1108 Cannabis sativa HOM05D006139 ORTHO05D007681 1.1e-52 209.9 118 85.6
GSVIVG01031668001 Vitis vinifera HOM05D006139 ORTHO05D007681 9.8e-41 170.2 118 71.2
Migut.N00440 Erythranthe guttata HOM05D006139 ORTHO05D007681 2.8e-40 168.7 118 66.9
Ciclev10019318m.g Citrus clementina HOM05D006139 ORTHO05D007681 4.1e-39 164.9 118 67.8
vmacro13984 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 7.0e-39 164.1 118 66.9
Atru.chr2.2053 Acer truncatum HOM05D006139 ORTHO05D007681 9.1e-39 163.7 118 65.3
MELO3C017678.2 Cucumis melo HOM05D006139 ORTHO05D007681 1.2e-38 163.3 118 69.5
Aqoxy2G03950 Aquilegia oxysepala HOM05D006139 ORTHO05D007681 2.0e-38 162.5 119 63.9
CsaV3_4G003770 Cucumis sativus L. HOM05D006139 ORTHO05D007681 2.7e-38 162.2 118 67.8
TAR365G1167 Trochodendron aralioides HOM05D006139 ORTHO05D007681 4.5e-38 161.4 118 66.1
Cpa.g.sc77.50 Carica papaya HOM05D006139 ORTHO05D007681 5.9e-38 161.0 114 66.7
Hma1.2p1_0412F.1_g147150 Hydrangea macrophylla HOM05D006139 ORTHO05D007681 1.0e-37 160.2 118 63.6
Lj4A728T41 Lonicera japonica HOM05D006139 ORTHO05D007681 1.0e-37 160.2 118 62.7
Manes.03G099000 Manihot esculenta HOM05D006139 ORTHO05D007681 1.0e-37 160.2 118 63.6
QL10p044141 Quercus lobata HOM05D006139 ORTHO05D007681 1.0e-37 160.2 118 64.4
Eucgr.F03241 Eucalyptus grandis HOM05D006139 ORTHO05D007681 1.3e-37 159.8 118 65.3
Sed0017452 Sechium edule HOM05D006139 ORTHO05D007681 1.7e-37 159.5 118 66.1
Haze_11079 Corylus avellana HOM05D006139 ORTHO05D007681 2.3e-37 159.1 118 64.4
Prupe.1G178000 Prunus persica HOM05D006139 ORTHO05D007681 2.3e-37 159.1 118 65.3
CSS0045945 Camellia sinensis var. sinensis HOM05D006139 ORTHO05D007681 3.8e-37 158.3 118 64.4
arahy.Tifrunner.gnm1.ann1.JAL8JD Arachis hypogaea HOM05D006139 ORTHO05D007681 6.5e-37 157.5 118 62.7
arahy.Tifrunner.gnm1.ann1.46LBLY Arachis hypogaea HOM05D006139 ORTHO05D007681 1.5e-36 156.4 118 62.7
AUR62003718 Chenopodium quinoa HOM05D006139 ORTHO05D007681 1.9e-36 156.0 118 63.6
MBI07_g00628_MAGBIO Magnolia biondii HOM05D006139 ORTHO05D007681 3.3e-36 155.2 119 63.0
Sabra11G0095200 Salix brachista HOM05D006139 ORTHO05D007681 4.2e-36 154.8 118 62.7
Sc22g0003230 Simmondsia chinensis HOM05D006139 ORTHO05D007681 4.2e-36 154.8 118 64.4
Glyma.20G248800 Glycine max HOM05D006139 ORTHO05D007681 7.2e-36 154.1 118 61.9
SGA_v2.0_scaffold109G31142 Striga asiatica HOM05D006139 ORTHO05D007681 9.5e-36 153.7 118 61.0
Potri.011G107400 Populus trichocarpa HOM05D006139 ORTHO05D007681 1.2e-35 153.3 118 62.7
Hund19684 Selenicereus undatus HOM05D006139 ORTHO05D007681 2.1e-35 152.5 118 63.6
arahy.Tifrunner.gnm1.ann1.6RHH59 Arachis hypogaea HOM05D006139 ORTHO05D007681 2.8e-35 152.1 115 61.7
Phvul.007G001600 Phaseolus vulgaris HOM05D006139 ORTHO05D007681 3.6e-35 151.8 118 61.0
Rhsim07G0086500 Rhododendron simsii HOM05D006139 ORTHO05D007681 8.0e-35 150.6 131 57.3
Nitab4.5_0001526g0130 Nicotiana tabacum HOM05D006139 ORTHO05D007681 1.0e-34 150.2 118 61.9
Lj5g0023092 Lotus japonicus HOM05D006139 ORTHO05D007681 1.4e-34 149.8 118 60.2
Psat6g243280 Pisum sativum HOM05D006139 ORTHO05D007681 1.4e-34 149.8 118 61.9
VMungo0720G1636 Vigna mungo HOM05D006139 ORTHO05D007681 1.8e-34 149.4 118 60.2
Thecc.07G123700 Theobroma cacao HOM05D006139 ORTHO05D007681 2.3e-34 149.1 118 60.2
Ah.03g143030 Amaranthus hybridus HOM05D006139 ORTHO05D007681 3.0e-34 148.7 130 58.5
RcHm_v2.0_Chr4g0409801 Rosa chinensis HOM05D006139 ORTHO05D007681 3.0e-34 148.7 118 60.2
TPR.G8879 Trifolium pratense HOM05D006139 ORTHO05D007681 3.0e-34 148.7 118 61.0
MD13G1278700 Malus domestica HOM05D006139 ORTHO05D007681 4.0e-34 148.3 118 62.7
TPR.G8907 Trifolium pratense HOM05D006139 ORTHO05D007681 4.0e-34 148.3 118 59.3
Cc03_g10570 Coffea canephora HOM05D006139 ORTHO05D007681 5.2e-34 147.9 118 57.6
Lsat_1_v5_gn_3_24941 Lactuca sativa HOM05D006139 ORTHO05D007681 5.2e-34 147.9 118 61.0
Lalb_Chr06g0164661 Lupinus albus HOM05D006139 ORTHO05D007681 5.2e-34 147.9 118 60.2
Nitab4.5_0001687g0050 Nicotiana tabacum HOM05D006139 ORTHO05D007681 5.2e-34 147.9 114 63.2
Peaxi162Scf00286g00443 Petunia axillaris HOM05D006139 ORTHO05D007681 5.2e-34 147.9 118 63.6
PGSC0003DMG400014069 Solanum tuberosum HOM05D006139 ORTHO05D007681 8.9e-34 147.1 118 61.0
TWI38G2388 Tripterygium wilfordii HOM05D006139 ORTHO05D007681 2.0e-33 146.0 118 62.7
unitig_578.g15954 Utricularia gibba HOM05D006139 ORTHO05D004041 2.6e-33 145.6 118 59.3
Nn3g20967 Nelumbo nucifera HOM05D006139 ORTHO05D007681 4.4e-33 144.8 118 61.0
MSTRG.17865 Avicennia marina HOM05D006139 ORTHO05D007681 5.7e-33 144.4 118 59.3
Zm00001eb116810 Zea mays HOM05D006139 ORTHO05D007681 7.5e-33 144.1 119 58.0
CDE02G2779 Ceratophyllum demersum HOM05D006139 ORTHO05D007681 1.3e-32 143.3 120 58.3
AUR62018029 Chenopodium quinoa HOM05D006139 ORTHO05D007681 1.7e-32 142.9 133 55.6
DCAR_005496 Daucus carota HOM05D006139 ORTHO05D007681 1.7e-32 142.9 118 58.5
Duzib213G0841 Durio zibethinus HOM05D006139 ORTHO05D007681 2.2e-32 142.5 118 57.6
Solyc09g098230.3 Solanum lycopersicum HOM05D006139 ORTHO05D007681 2.2e-32 142.5 118 59.3
CiPaw.01G108300 Carya illinoinensis HOM05D006139 ORTHO05D007681 2.8e-32 142.1 118 59.3
Medtr1g116980 Medicago truncatula HOM05D006139 ORTHO05D007681 2.8e-32 142.1 118 59.3
ECA246G3778 Erigeron canadensis HOM05D006139 ORTHO05D007681 3.7e-32 141.7 118 59.3
Sopen09g036170 Solanum pennellii HOM05D006139 ORTHO05D007681 6.3e-32 141.0 118 58.5
HPP92_015930 Vanilla planifolia HOM05D006139 ORTHO05D007681 6.3e-32 141.0 118 54.2
COL.COLO4_17513 Corchorus olitorius HOM05D006139 ORTHO05D007681 8.3e-32 140.6 118 58.5
FAN22G0061 Fragaria x ananassa HOM05D006139 ORTHO05D007681 8.3e-32 140.6 118 56.8
PSO675G6876 Papaver somniferum HOM05D006139 ORTHO05D007681 1.1e-31 140.2 118 55.9
FvH4_4g12150 Fragaria vesca HOM05D006139 ORTHO05D007681 2.4e-31 139.0 118 55.9
FAN07G2792 Fragaria x ananassa HOM05D006139 ORTHO05D007681 2.4e-31 139.0 118 55.9
FAN12G0395 Fragaria x ananassa HOM05D006139 ORTHO05D007681 2.4e-31 139.0 118 55.9
FAN12G2778 Fragaria x ananassa HOM05D006139 ORTHO05D007681 2.4e-31 139.0 118 55.9
FAN17G0552 Fragaria x ananassa HOM05D006139 ORTHO05D007681 2.4e-31 139.0 118 55.9
PSO017G2886 Papaver somniferum HOM05D006139 ORTHO05D007681 5.4e-31 137.9 118 55.1
CAN.G710.40 Capsicum annuum HOM05D006139 ORTHO05D007681 2.7e-30 135.6 151 50.3
PGR031G2404 Punica granatum HOM05D006139 ORTHO05D007681 3.5e-30 135.2 118 55.9
Mapoly0113s0020 Marchantia polymorpha HOM05D006139 ORTHO05D007681 3.8e-29 131.7 120 53.3
Gohir.A01G052100 Gossypium hirsutum HOM05D006139 ORTHO05D007681 9.5e-28 127.1 118 55.1
ClCG07G016640 Citrullus lanatus HOM05D006139 ORTHO05D007681 1.6e-27 126.3 99 63.6
ATR0609G005 Amborella trichopoda HOM05D006139 ORTHO05D007681 2.1e-27 125.9 121 53.7
Ca_11425_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 2.1e-27 125.9 101 60.4
Gorai.002G052100 Gossypium raimondii HOM05D006139 ORTHO05D007681 6.1e-27 124.4 118 54.2
Gohir.D01G041500 Gossypium hirsutum HOM05D006139 ORTHO05D007681 1.8e-26 122.9 113 55.8
BcaB02g06659 Brassica carinata HOM05D006139 ORTHO05D007681 8.9e-26 120.6 118 50.0
Thhalv10007085m.g Eutrema salsugineum HOM05D006139 ORTHO05D007681 1.2e-25 120.2 118 50.8
Sp1g15110 Schrenkiella parvula HOM05D006139 ORTHO05D007681 1.5e-25 119.8 118 50.0
THA.LOC104812308 Tarenaya hassleriana HOM05D006139 ORTHO05D007681 1.5e-25 119.8 118 52.5
AT1G16970 Arabidopsis thaliana HOM05D006139 ORTHO05D007681 3.4e-25 118.6 118 50.0
Carub.0001s1670 Capsella rubella HOM05D006139 ORTHO05D007681 5.8e-25 117.9 118 50.0
BcaC05g25552 Brassica carinata HOM05D006139 ORTHO05D007681 1.3e-24 116.7 118 49.2
C05p15280 Brassica napus HOM05D006139 ORTHO05D007681 1.3e-24 116.7 118 49.2
BolC5t30234H Brassica oleracea HOM05D006139 ORTHO05D007681 1.3e-24 116.7 118 49.2
CARHR017480 Cardamine hirsuta HOM05D006139 ORTHO05D007681 1.7e-24 116.3 118 49.2
A06p12870 Brassica napus HOM05D006139 ORTHO05D007681 4.9e-24 114.8 118 48.3
BraA06t24447Z Brassica rapa HOM05D006139 ORTHO05D007681 4.9e-24 114.8 118 48.3
SMO361G0769 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 3.3e-20 102.1 120 43.3
Aa31LG7G1410 Aethionema arabicum HOM05D006139 ORTHO05D007681 7.3e-20 100.9 118 42.4
SMO361G0513 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 9.5e-20 100.5 120 42.5
AagrBONN_evm.TU.Sc2ySwM_228.1556 Anthoceros agrestis HOM05D006139 ORTHO05D007681 1.4e-18 96.7 120 41.7
BolC4t22161H Brassica oleracea HOM05D006139 ORTHO05D007681 5.8e-17 91.3 79 55.7
CBR_g19434 Chara braunii HOM05D006139 ORTHO05D007681 8.6e-13 77.4 118 35.6
Potri.006G132501 Populus trichocarpa HOM05D006139 ORTHO05D007681 9.5e-12 73.9 86 48.8
Pp3c18_7140 Physcomitrium patens HOM05D006139 ORTHO05D007681 2.3e-10 69.3 120 32.5


User provided reference genes

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