Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G143.13 Capsicum annuum HOM05D005462 ORTHO05D006718 3.1e-97 360.5 751 100.0
Solyc11g006680.3 Solanum lycopersicum HOM05D005462 ORTHO05D006718 1.6e-82 311.6 748 97.2
Peaxi162Scf00125g00414 Petunia axillaris HOM05D005462 ORTHO05D006718 3.6e-82 310.5 748 80.9
Sopen11g002610 Solanum pennellii HOM05D005462 ORTHO05D006718 4.7e-82 310.1 748 97.2
PGSC0003DMG401007600 Solanum tuberosum HOM05D005462 ORTHO05D006718 2.9e-79 300.8 150 97.3
Nitab4.5_0003787g0050 Nicotiana tabacum HOM05D005462 ORTHO05D006718 8.4e-79 299.3 753 67.2
Hma1.2p1_0834F.1_g225780 Hydrangea macrophylla HOM05D005462 ORTHO05D006718 1.3e-68 265.4 149 84.6
CSS0018603 Camellia sinensis var. sinensis HOM05D005462 ORTHO05D006718 1.3e-66 258.8 146 86.3
Dinv08599 Davidia involucrata HOM05D005462 ORTHO05D006718 3.6e-66 257.3 146 83.6
ECA232G2701 Erigeron canadensis HOM05D005462 ORTHO05D006718 1.5e-64 251.9 144 81.9
Lj2C34T7 Lonicera japonica HOM05D005462 ORTHO05D006718 2.0e-64 251.5 142 85.2
Sabra08G0010900 Salix brachista HOM05D005462 ORTHO05D006718 9.9e-64 249.2 149 79.2
Actinidia03844 Actinidia chinensis HOM05D005462 ORTHO05D006718 1.7e-63 248.4 148 80.4
Sed0013359 Sechium edule HOM05D005462 ORTHO05D006718 2.2e-63 248.1 143 82.5
Potri.008G017400 Populus trichocarpa HOM05D005462 ORTHO05D006718 4.9e-63 246.9 148 79.7
Sc09g0005160 Simmondsia chinensis HOM05D005462 ORTHO05D006718 6.4e-63 246.5 147 81.0
HanXRQChr11g0321421 Helianthus annuus HOM05D005462 ORTHO05D006718 8.4e-63 246.1 144 80.6
ClCG05G021870 Citrullus lanatus HOM05D005462 ORTHO05D006718 1.9e-62 245.0 144 79.9
Aqoxy4G02697 Aquilegia oxysepala HOM05D005462 ORTHO05D006718 3.2e-62 244.2 148 77.0
SalBow3G0159 Salvia bowleyana HOM05D005462 ORTHO05D006718 3.2e-62 244.2 146 80.8
Eucgr.G02683 Eucalyptus grandis HOM05D005462 ORTHO05D006718 4.2e-62 243.8 144 81.9
Atru.chr12.1058 Acer truncatum HOM05D005462 ORTHO05D006718 1.6e-61 241.9 145 77.9
TWI15G0792 Tripterygium wilfordii HOM05D005462 ORTHO05D006718 2.1e-61 241.5 148 78.4
Nn2g14251 Nelumbo nucifera HOM05D005462 ORTHO05D006718 1.0e-60 239.2 144 76.4
Cpa.g.sc54.12 Carica papaya HOM05D005462 ORTHO05D006718 1.3e-60 238.8 144 81.2
Prupe.2G071400 Prunus persica HOM05D005462 ORTHO05D006718 3.9e-60 237.3 144 77.8
EL10Ac3g07337 Beta vulgaris HOM05D005462 ORTHO05D006718 5.1e-60 236.9 146 77.4
PSO384G2581 Papaver somniferum HOM05D005462 ORTHO05D006718 8.7e-60 236.1 144 74.3
EL10Ac3g07311 Beta vulgaris HOM05D005462 ORTHO05D006718 1.1e-59 235.7 155 74.2
Potri.010G241300 Populus trichocarpa HOM05D005462 ORTHO05D006718 1.1e-59 235.7 144 78.5
PGR142G1862 Punica granatum HOM05D005462 ORTHO05D006718 1.5e-59 235.3 150 78.0
THA.LOC104823152 Tarenaya hassleriana HOM05D005462 ORTHO05D006718 1.9e-59 235.0 154 72.7
Ah.04g150500 Amaranthus hybridus HOM05D005462 ORTHO05D006718 2.5e-59 234.6 149 77.2
PSO339G2458 Papaver somniferum HOM05D005462 ORTHO05D006718 2.5e-59 234.6 144 74.3
TAR636G3557 Trochodendron aralioides HOM05D005462 ORTHO05D006718 2.5e-59 234.6 143 76.9
Ciclev10014488m.g Citrus clementina HOM05D005462 ORTHO05D006718 4.3e-59 233.8 145 77.2
DCAR_028403 Daucus carota HOM05D005462 ORTHO05D006718 4.3e-59 233.8 149 72.5
MD07G1061700 Malus domestica HOM05D005462 ORTHO05D006718 4.3e-59 233.8 144 77.8
EL10Ac3g07314 Beta vulgaris HOM05D005462 ORTHO05D006718 7.4e-59 233.0 143 77.6
CsaV3_5G035270 Cucumis sativus L. HOM05D005462 ORTHO05D006718 9.6e-59 232.6 138 79.0
Manes.07G085300 Manihot esculenta HOM05D005462 ORTHO05D006718 2.1e-58 231.5 140 77.9
Hund06792 Selenicereus undatus HOM05D005462 ORTHO05D006718 6.2e-58 229.9 145 75.9
SGA_v2.0_scaffold329G48874 Striga asiatica HOM05D005462 ORTHO05D006718 8.1e-58 229.6 151 74.2
Migut.F00860 Erythranthe guttata HOM05D005462 ORTHO05D006718 1.4e-57 228.8 151 76.8
Aa31LG11G5620 Aethionema arabicum HOM05D005462 ORTHO05D000003 2.4e-57 228.0 148 75.7
CiPaw.13G042600 Carya illinoinensis HOM05D005462 ORTHO05D006718 2.4e-57 228.0 143 77.6
Gorai.013G010900 Gossypium raimondii HOM05D005462 ORTHO05D006718 2.4e-57 228.0 149 76.5
Cfa010538 Carpinus fangiana HOM05D005462 ORTHO05D006718 3.1e-57 227.6 143 77.6
Ca_13242_v3 Cicer arietinum L. HOM05D005462 ORTHO05D006718 3.1e-57 227.6 141 74.5
Ca_30156_v3 Cicer arietinum L. HOM05D005462 ORTHO05D006718 3.1e-57 227.6 141 74.5
MELO3C012341.2 Cucumis melo HOM05D005462 ORTHO05D006718 3.1e-57 227.6 134 79.9
COL.COLO4_07193 Corchorus olitorius HOM05D005462 ORTHO05D006718 6.9e-57 226.5 149 75.2
Lj6g0019256 Lotus japonicus HOM05D005462 ORTHO05D006718 6.9e-57 226.5 140 76.4
Duzib128G2019 Durio zibethinus HOM05D005462 ORTHO05D006718 9.0e-57 226.1 152 73.0
Gohir.D13G010200 Gossypium hirsutum HOM05D005462 ORTHO05D006718 9.0e-57 226.1 149 75.8
TPR.G19815 Trifolium pratense HOM05D005462 ORTHO05D006718 1.2e-56 225.7 141 72.3
Gohir.A13G009500 Gossypium hirsutum HOM05D005462 ORTHO05D006718 1.5e-56 225.3 149 75.8
Thecc.10G115600 Theobroma cacao HOM05D005462 ORTHO05D006718 1.5e-56 225.3 149 74.5
Cc02_g09510 Coffea canephora HOM05D005462 ORTHO05D006718 2.6e-56 224.6 131 82.4
arahy.Tifrunner.gnm1.ann1.1Q3Q3C Arachis hypogaea HOM05D005462 ORTHO05D006718 1.3e-55 222.2 143 74.8
arahy.Tifrunner.gnm1.ann1.D9T4RB Arachis hypogaea HOM05D005462 ORTHO05D006718 1.3e-55 222.2 143 74.8
arahy.Tifrunner.gnm1.ann1.LTKS6Y Arachis hypogaea HOM05D005462 ORTHO05D006718 1.3e-55 222.2 143 74.8
RcHm_v2.0_Chr1g0336351 Rosa chinensis HOM05D005462 ORTHO05D006718 1.3e-55 222.2 148 74.3
Nitab4.5_0001047g0040 Nicotiana tabacum HOM05D000001 ORTHO05D000003 2.2e-55 221.5 120 90.0
Oeu033986.1 Olea europaea HOM05D005462 ORTHO05D006718 2.2e-55 221.5 141 79.4
Medtr1g048080 Medicago truncatula HOM05D005462 ORTHO05D006718 3.8e-55 220.7 140 71.4
ATR0772G220 Amborella trichopoda HOM05D005462 ORTHO05D006718 4.9e-55 220.3 144 73.6
CANSAT56G2776 Cannabis sativa HOM05D005462 ORTHO05D006718 6.5e-55 219.9 136 75.0
AUR62021021 Chenopodium quinoa HOM05D005462 ORTHO05D006718 1.9e-54 218.4 141 74.5
QL04p046981 Quercus lobata HOM05D005462 ORTHO05D006718 7.1e-54 216.5 136 76.5
Solyc04g009720.1 Solanum lycopersicum HOM05D005462 ORTHO05D006718 7.1e-54 216.5 147 72.8
BcaC06g32185 Brassica carinata HOM05D005462 ORTHO05D006718 1.2e-53 215.7 156 69.2
FAN03G2522 Fragaria x ananassa HOM05D005462 ORTHO05D006718 2.1e-53 214.9 149 71.1
MSTRG.27558 Avicennia marina HOM05D005462 ORTHO05D006718 2.7e-53 214.5 147 74.1
Carub.0006s0369 Capsella rubella HOM05D005462 ORTHO05D006718 2.7e-53 214.5 152 68.4
Sp6g38020 Schrenkiella parvula HOM05D005462 ORTHO05D006718 2.7e-53 214.5 152 71.1
AL6G14460 Arabidopsis lyrata HOM05D005462 ORTHO05D006718 3.5e-53 214.2 152 68.4
AT5G04810 Arabidopsis thaliana HOM05D005462 ORTHO05D006718 3.5e-53 214.2 152 68.4
Lalb_Chr01g0010721 Lupinus albus HOM05D005462 ORTHO05D006718 4.6e-53 213.8 141 74.5
FvH4_7g06690 Fragaria vesca HOM05D005462 ORTHO05D006718 6.0e-53 213.4 149 70.5
A10p31410 Brassica napus HOM05D005462 ORTHO05D006718 1.0e-52 212.6 154 67.5
BraA10t45187Z Brassica rapa HOM05D005462 ORTHO05D006718 1.0e-52 212.6 154 67.5
FAN06G4410 Fragaria x ananassa HOM05D005462 ORTHO05D006718 1.0e-52 212.6 150 70.0
C09p72080 Brassica napus HOM05D005462 ORTHO05D006718 1.3e-52 212.2 154 67.5
FAN10G0457 Fragaria x ananassa HOM05D005462 ORTHO05D006718 1.3e-52 212.2 149 70.5
MBI01_g28354_MAGBIO Magnolia biondii HOM05D005462 ORTHO05D006718 1.3e-52 212.2 147 71.4
VMungo0720G0270 Vigna mungo HOM05D005462 ORTHO05D006718 1.3e-52 212.2 144 72.9
PGSC0003DMG400016997 Solanum tuberosum HOM05D005462 ORTHO05D006718 1.8e-52 211.8 146 74.0
Thhalv10012596m.g Eutrema salsugineum HOM05D005462 ORTHO05D006718 5.1e-52 210.3 152 68.4
Glyma.20G074200 Glycine max HOM05D005462 ORTHO05D006718 1.5e-51 208.8 145 70.3
Phvul.007G234900 Phaseolus vulgaris HOM05D005462 ORTHO05D006718 1.5e-51 208.8 144 71.5
Sopen04g004840 Solanum pennellii HOM05D005462 ORTHO05D006718 1.9e-51 208.4 145 72.4
PGSC0003DMG402007600 Solanum tuberosum HOM05D005462 ORTHO05D006718 4.8e-50 203.8 120 85.0
BolC9t59953H Brassica oleracea HOM05D005462 ORTHO05D006718 3.1e-49 201.1 147 67.3
Sabra10G0188800 Salix brachista HOM05D005462 ORTHO05D006718 1.7e-47 195.3 127 76.4
GSVIVG01034651001 Vitis vinifera HOM05D005462 ORTHO05D006718 1.7e-47 195.3 120 79.2
HPP92_013816 Vanilla planifolia HOM05D005462 ORTHO05D006718 4.2e-46 190.7 136 68.4
SEGI_04507 Sequoiadendron giganteum HOM05D005462 ORTHO05D006718 9.3e-46 189.5 146 61.6
CAN.G186.57 Capsicum annuum HOM05D005462 ORTHO05D006718 1.5e-43 182.2 138 67.4
Os04g0684500 Oryza sativa ssp. japonica HOM05D005462 ORTHO05D006718 3.3e-43 181.0 148 58.8
Zm00001eb434090 Zea mays HOM05D005462 ORTHO05D006718 6.3e-42 176.8 145 60.7
AagrBONN_evm.TU.Sc2ySwM_362.2024 Anthoceros agrestis HOM05D005462 ORTHO05D006718 1.4e-36 159.1 144 53.5
Oeu033987.1 Olea europaea HOM05D005462 ORTHO05D006718 6.7e-36 156.8 113 69.0
AUR62018420 Chenopodium quinoa HOM05D005462 ORTHO05D006718 2.8e-34 151.4 101 72.3
Peaxi162Scf00195g01111 Petunia axillaris HOM05D005462 ORTHO05D006718 6.3e-34 150.2 110 67.3
HanXRQChr11g0321471 Helianthus annuus HOM05D005462 ORTHO05D006718 2.4e-33 148.3 113 66.4
Haze_03474 Corylus avellana HOM05D005462 ORTHO05D006718 4.1e-33 147.5 151 52.3
Solyc04g009730.4 Solanum lycopersicum HOM05D005462 ORTHO05D006718 9.1e-33 146.4 104 70.2
MBI01_g28355_MAGBIO Magnolia biondii HOM05D005462 ORTHO05D006718 5.9e-32 143.7 85 78.8
Cpa.g.sc1114.1 Carica papaya HOM05D005462 ORTHO05D006718 1.3e-31 142.5 112 66.1
Pp3c16_280 Physcomitrium patens HOM05D005462 ORTHO05D006718 6.5e-31 140.2 140 48.6
HPP92_027470 Vanilla planifolia HOM05D005462 ORTHO05D006718 1.1e-30 139.4 91 71.4
CSS0015574 Camellia sinensis var. sinensis HOM05D005462 ORTHO05D006718 1.4e-30 139.0 108 65.7
Lsat_1_v5_gn_9_53421 Lactuca sativa HOM05D005462 ORTHO05D006718 1.4e-30 139.0 79 79.7
Lsat_1_v5_gn_9_47180 Lactuca sativa HOM05D005462 ORTHO05D006718 5.5e-30 137.1 88 72.7
vmacro07266 Vaccinium macrocarpon HOM05D005462 ORTHO05D006718 2.1e-29 135.2 119 62.2
Psat0s3982g0040 Pisum sativum HOM05D005462 ORTHO05D006718 2.7e-29 134.8 114 61.4
Glyma.10G122100 Glycine max HOM05D005462 ORTHO05D006718 6.1e-29 133.7 116 61.2
Mapoly0061s0009 Marchantia polymorpha HOM05D005462 ORTHO05D006718 2.3e-28 131.7 142 47.9
CDE06G1106 Ceratophyllum demersum HOM05D005462 ORTHO05D006718 6.7e-28 130.2 115 55.7
CARHR208470 Cardamine hirsuta HOM05D005462 ORTHO05D006718 2.4e-25 121.7 74 71.6
Pp3c5_10110 Physcomitrium patens HOM05D005462 ORTHO05D006718 2.6e-24 118.2 148 41.9
CDE06G0092 Ceratophyllum demersum HOM05D005462 ORTHO05D006718 7.7e-24 116.7 81 64.2
HPP92_027469 Vanilla planifolia HOM05D005462 ORTHO05D006718 1.0e-23 116.3 95 61.1
SMO165G0125 Selaginella moellendorffii HOM05D005462 ORTHO05D006718 7.2e-22 110.2 141 42.6
SMO272G0004 Selaginella moellendorffii HOM05D005462 ORTHO05D006718 9.4e-22 109.8 141 42.6
CBR_g70711 Chara braunii HOM05D005462 ORTHO05D006718 2.2e-18 98.6 154 39.0
vmacro05136 Vaccinium macrocarpon HOM05D005462 ORTHO05D006718 4.8e-18 97.4 70 68.6
Oeu033283.1 Olea europaea HOM05D005462 ORTHO05D006718 8.2e-18 96.7 58 77.6
Haze_03485 Corylus avellana HOM05D005462 ORTHO05D006718 4.2e-14 84.3 46 82.6
HPP92_013817 Vanilla planifolia HOM05D005462 ORTHO05D006718 2.7e-13 81.6 66 62.1
C09p30460 Brassica napus HOM05D003366 ORTHO05D004045 1.5e-11 75.9 45 73.3
BolC9t55910H Brassica oleracea HOM05D003366 ORTHO05D004045 2.2e-10 72.0 85 50.6
CsaV3_1G017360 Cucumis sativus L. HOM05D005462 ORTHO05D006718 1.1e-09 69.7 45 75.6
Carub.0002s2389 Capsella rubella HOM05D005462 ORTHO05D006718 2.4e-09 68.6 43 74.4
Carub.0006s3020 Capsella rubella HOM05D005462 ORTHO05D006718 2.4e-09 68.6 43 74.4


User provided reference genes

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